RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W THI11P47183 340 aa4.28□□□□□ -1.72
CAF130YGR134W ESC2Q06340 456 aa4.28□□□□□ -1.72
CAF130YGR134W ERF2Q06551 359 aa4.28□□□□□ -1.72
CAF130YGR134W THI13Q07748 340 aa4.28□□□□□ -1.72
CAF130YGR134W YLR001CQ07895 862 aa4.28□□□□□ -1.72
CAF130YGR134W GAS4Q08271 471 aa4.28□□□□□ -1.72
CAF130YGR134W THO2P53552 1597 aaKnown RBP4.28□□□□□ -1.72
CAF130YGR134W BDP1P46678 594 aa4.28□□□□□ -1.72
CAF130YGR134W FUR4P05316 633 aaKnown RBP4.27□□□□□ -1.73
CAF130YGR134W PHO8P11491 566 aa4.27□□□□□ -1.73
CAF130YGR134W YBR197CP38306 217 aa4.27□□□□□ -1.73
CAF130YGR134W MSH4P40965 878 aaPredicted RBP4.27□□□□□ -1.73
CAF130YGR134W ATH1P48016 1211 aa4.27□□□□□ -1.73
CAF130YGR134W EEB1Q02891 456 aa4.27□□□□□ -1.73
CAF130YGR134W FLC1Q08967 793 aa4.27□□□□□ -1.73
CAF130YGR134W RPB10P22139 70 aa4.27□□□□□ -1.73
CAF130YGR134W UBP10P53874 792 aaPredicted RBP4.27□□□□□ -1.73
CAF130YGR134W ATG13Q06628 738 aa4.27□□□□□ -1.73
CAF130YGR134W NMD3P38861 518 aaKnown RBP4.27□□□□□ -1.73
CAF130YGR134W FIG4P42837 879 aa4.27□□□□□ -1.73
CAF130YGR134W YNL115CP53925 644 aa4.27□□□□□ -1.73
CAF130YGR134W YNL034WP53963 612 aa4.27□□□□□ -1.73
CAF130YGR134W YNL018CP53976 612 aa4.27□□□□□ -1.73
CAF130YGR134W RSC4Q02206 625 aa4.27□□□□□ -1.73
CAF130YGR134W NTG2Q08214 380 aa4.27□□□□□ -1.73
CAF130YGR134W WRS1Q12109 432 aaKnown RBP4.27□□□□□ -1.73
CAF130YGR134W TMA17Q12513 150 aa4.27□□□□□ -1.73
CAF130YGR134W CAN1P04817 590 aa4.26□□□□□ -1.73
CAF130YGR134W NGR1P32831 672 aaKnown RBP4.26□□□□□ -1.73
CAF130YGR134W AMN1P38285 549 aaPredicted RBP4.26□□□□□ -1.73
CAF130YGR134W TYW3P53177 273 aa4.26□□□□□ -1.73
CAF130YGR134W ATG16Q03818 150 aa4.26□□□□□ -1.73
CAF130YGR134W OPI10Q08202 246 aa4.26□□□□□ -1.73
CAF130YGR134W CLN2P20438 545 aa4.26□□□□□ -1.73
CAF130YGR134W MSH2P25847 964 aa4.26□□□□□ -1.73
CAF130YGR134W CDC55Q00362 526 aa4.26□□□□□ -1.73
CAF130YGR134W CDC73Q06697 393 aa4.26□□□□□ -1.73
CAF130YGR134W PUN1Q06991 263 aa4.26□□□□□ -1.73
CAF130YGR134W TFB4Q12004 338 aa4.26□□□□□ -1.73
CAF130YGR134W NPR1P22211 790 aa4.25□□□□□ -1.73
CAF130YGR134W SLY41P22215 453 aa4.25□□□□□ -1.73
CAF130YGR134W VPS35P34110 944 aa4.25□□□□□ -1.73
CAF130YGR134W PES4P39684 611 aa4.25□□□□□ -1.73
CAF130YGR134W SPO20Q04359 397 aa4.25□□□□□ -1.73
CAF130YGR134W GRX7P38068 203 aa4.25□□□□□ -1.73
CAF130YGR134W YMR196WQ04336 1088 aa4.25□□□□□ -1.73
CAF130YGR134W RTP1Q12751 981 aa4.25□□□□□ -1.73
CAF130YGR134W BET3P36149 193 aa4.25□□□□□ -1.73
CAF130YGR134W PIC2P40035 300 aa4.25□□□□□ -1.73
CAF130YGR134W TGL3P40308 642 aa4.25□□□□□ -1.73
CAF130YGR134W RTA1P53047 317 aa4.25□□□□□ -1.73
CAF130YGR134W TAF8Q03750 510 aa4.25□□□□□ -1.73
CAF130YGR134W SND1Q04007 877 aa4.25□□□□□ -1.73
CAF130YGR134W YLR125WQ12138 136 aa4.25□□□□□ -1.73
CAF130YGR134W YOL087CQ99247 1116 aa4.25□□□□□ -1.73
CAF130YGR134W XRN1P22147 1528 aaKnown RBP4.24□□□□□ -1.73
CAF130YGR134W HEM13P11353 328 aaKnown RBP4.24□□□□□ -1.73
CAF130YGR134W SRM1P21827 482 aa4.24□□□□□ -1.73
CAF130YGR134W EXO84P38261 753 aa4.24□□□□□ -1.73
CAF130YGR134W PSR1Q07800 427 aa4.24□□□□□ -1.73
CAF130YGR134W PET112P33893 541 aa4.24□□□□□ -1.73
CAF130YGR134W YKL222CP35995 705 aa4.24□□□□□ -1.73
CAF130YGR134W TPM1P17536 199 aaKnown RBP4.23□□□□□ -1.73
CAF130YGR134W RPN12P32496 274 aa4.23□□□□□ -1.73
CAF130YGR134W YBR071WP38243 211 aa4.23□□□□□ -1.73
CAF130YGR134W HXT5P38695 592 aa4.23□□□□□ -1.73
CAF130YGR134W HXT13P39924 564 aa4.23□□□□□ -1.73
CAF130YGR134W MAD1P40957 749 aa4.23□□□□□ -1.73
CAF130YGR134W HXT17P53631 564 aa4.23□□□□□ -1.73
CAF130YGR134W HXT15P54854 567 aa4.23□□□□□ -1.73
CAF130YGR134W HIR1P32479 840 aa4.23□□□□□ -1.73
CAF130YGR134W CTR9P89105 1077 aa4.23□□□□□ -1.73
CAF130YGR134W CIA1Q05583 330 aa4.23□□□□□ -1.73
CAF130YGR134W CCP1P00431 361 aa4.23□□□□□ -1.73
CAF130YGR134W SEC2P17065 759 aa4.23□□□□□ -1.73
CAF130YGR134W PRE9P23638 258 aaKnown RBP4.23□□□□□ -1.73
CAF130YGR134W UGA4P32837 571 aa4.23□□□□□ -1.73
CAF130YGR134W PUS6P53294 404 aa4.23□□□□□ -1.73
CAF130YGR134W MTC5Q03897 1148 aa4.23□□□□□ -1.73
CAF130YGR134W ENT2Q05785 613 aa4.23□□□□□ -1.73
CAF130YGR134W HIR3P47171 1648 aa4.23□□□□□ -1.73
CAF130YGR134W SSK2P53599 1579 aa4.23□□□□□ -1.73
CAF130YGR134W FOB1O13329 566 aa4.22□□□□□ -1.73
CAF130YGR134W COBP00163 385 aa4.22□□□□□ -1.73
CAF130YGR134W RPL8BP29453 256 aaKnown RBP4.22□□□□□ -1.73
CAF130YGR134W SEA4P38164 1038 aa4.22□□□□□ -1.73
CAF130YGR134W YNL011CP53980 444 aa4.22□□□□□ -1.73
CAF130YGR134W CBC2Q08920 208 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
CAF130YGR134W APA1P16550 321 aaKnown RBP4.22□□□□□ -1.73
CAF130YGR134W SPR3P41901 512 aa4.22□□□□□ -1.73
CAF130YGR134W APP1P53933 587 aa4.22□□□□□ -1.73
CAF130YGR134W UBX4P54730 416 aa4.22□□□□□ -1.73
CAF130YGR134W PLC1P32383 869 aa4.22□□□□□ -1.73
CAF130YGR134W SOH1P38633 127 aa4.22□□□□□ -1.73
CAF130YGR134W SEC26P41810 973 aaKnown RBP4.22□□□□□ -1.73
CAF130YGR134W IMH1Q06704 911 aaKnown RBP4.22□□□□□ -1.73
CAF130YGR134W SDH5Q08230 162 aa4.22□□□□□ -1.73
CAF130YGR134W SRF1Q12516 437 aa4.22□□□□□ -1.73
CAF130YGR134W NHA1Q99271 985 aa4.22□□□□□ -1.73
CAF130YGR134W ADR1P07248 1323 aa4.21□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 59.3 ms