RNA–Protein interactions for RNA: YGL240W

DOC1, Transcript of Processivity factor, yeastyeast

Gene DOC1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DOC1YGL240W NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.09□□□□□ -0.95not detected
DOC1YGL240W PRP42Q03776 544 aaKnown RBP9.09□□□□□ -0.95
DOC1YGL240W NOP8Q08287 484 aaPredicted RBP9.09□□□□□ -0.95
DOC1YGL240W MAK21Q12176 1025 aaKnown RBP9.09□□□□□ -0.95
DOC1YGL240W RPS7AP26786 190 aaKnown RBP9.08□□□□□ -0.96
DOC1YGL240W DAL5P15365 543 aa9.07□□□□□ -0.96
DOC1YGL240W LCB1P25045 558 aaKnown RBP9.07□□□□□ -0.96
DOC1YGL240W BOI2P39969 1040 aa9.07□□□□□ -0.96
DOC1YGL240W YIL092WP40497 633 aa9.07□□□□□ -0.96
DOC1YGL240W RRT6P53117 311 aaPredicted RBP9.07□□□□□ -0.96
DOC1YGL240W IRC4Q03036 179 aa9.07□□□□□ -0.96
DOC1YGL240W PEX29Q03370 554 aa9.07□□□□□ -0.96
DOC1YGL240W SAC3P46674 1301 aa9.06□□□□□ -0.96
DOC1YGL240W YKR023WP36119 530 aaKnown RBP9.06□□□□□ -0.96
DOC1YGL240W MTC5Q03897 1148 aa9.06□□□□□ -0.96
DOC1YGL240W YRB30P53107 440 aaPredicted RBP9.05□□□□□ -0.96
DOC1YGL240W JIP4Q03361 876 aa9.05□□□□□ -0.96
DOC1YGL240W RPS19AP07280 144 aaKnown RBP9.04□□□□□ -0.96
DOC1YGL240W RPS19BP07281 144 aaPredicted RBP9.04□□□□□ -0.96
DOC1YGL240W ASH1P34233 588 aa9.04□□□□□ -0.96
DOC1YGL240W RBA50Q04418 439 aa9.04□□□□□ -0.96
DOC1YGL240W MAL31P38156 614 aa9.03□□□□□ -0.96
DOC1YGL240W RSC30P38781 883 aa9.03□□□□□ -0.96
DOC1YGL240W FUN12P39730 1002 aaKnown RBP9.03□□□□□ -0.96
DOC1YGL240W UBX2Q04228 584 aa9.03□□□□□ -0.96
DOC1YGL240W VPS13Q07878 3144 aa9.02□□□□□ -0.97
DOC1YGL240W ARG82P07250 355 aa9.02□□□□□ -0.97
DOC1YGL240W RPT3P33298 428 aaKnown RBP9.02□□□□□ -0.97
DOC1YGL240W NIT1P40447 199 aa9.02□□□□□ -0.97
DOC1YGL240W SGD1Q06132 899 aa9.02□□□□□ -0.97
DOC1YGL240W SUP35P05453 685 aaKnown RBP9.01□□□□□ -0.97
DOC1YGL240W SRC1Q03707 834 aa9.01□□□□□ -0.97
DOC1YGL240W SNU66Q12420 587 aaPredicted RBP9.01□□□□□ -0.97
DOC1YGL240W RAD2P07276 1031 aa9□□□□□ -0.97
DOC1YGL240W YJL171CP46992 396 aa9□□□□□ -0.97
DOC1YGL240W PFK2P16862 959 aaKnown RBP RIP-Chip data8.99□□□□□ -0.97not detected
DOC1YGL240W SLA1P32790 1244 aa8.99□□□□□ -0.97
DOC1YGL240W ADR1P07248 1323 aa8.99□□□□□ -0.97
DOC1YGL240W YNG2P38806 282 aaKnown RBP8.98□□□□□ -0.97
DOC1YGL240W ILV3P39522 585 aaKnown RBP8.98□□□□□ -0.97
DOC1YGL240W WRS1Q12109 432 aaKnown RBP8.98□□□□□ -0.97
DOC1YGL240W DUR1,2P32528 1835 aaKnown RBP8.98□□□□□ -0.97
DOC1YGL240W KEL1P38853 1164 aaKnown RBP8.97□□□□□ -0.97
DOC1YGL240W JJJ2P46997 583 aa8.97□□□□□ -0.97
DOC1YGL240W SPO1P53541 631 aa8.97□□□□□ -0.97
DOC1YGL240W SEC18P18759 758 aaKnown RBP8.96□□□□□ -0.98
DOC1YGL240W YLR225CQ05948 407 aaKnown RBP8.96□□□□□ -0.98
DOC1YGL240W GAL2P13181 574 aa8.95□□□□□ -0.98
DOC1YGL240W GCD7P32502 381 aaPredicted RBP8.95□□□□□ -0.98
DOC1YGL240W IXR1P33417 597 aa8.95□□□□□ -0.98
DOC1YGL240W GYP5Q12344 894 aa8.95□□□□□ -0.98
DOC1YGL240W AI2P03876 854 aa8.94□□□□□ -0.98
DOC1YGL240W NUG1P40010 520 aaKnown RBP8.94□□□□□ -0.98
DOC1YGL240W ULP1Q02724 621 aa8.94□□□□□ -0.98
DOC1YGL240W PUF6Q04373 656 aaKnown RBP8.94□□□□□ -0.98
DOC1YGL240W ACK1Q07622 623 aaPredicted RBP8.94□□□□□ -0.98
DOC1YGL240W PPM2Q08282 695 aa8.94□□□□□ -0.98
DOC1YGL240W GIN4Q12263 1142 aa8.94□□□□□ -0.98
DOC1YGL240W POL32P47110 350 aa8.93□□□□□ -0.98
DOC1YGL240W PUS6P53294 404 aa8.93□□□□□ -0.98
DOC1YGL240W YVH1Q02256 364 aaKnown RBP8.93□□□□□ -0.98
DOC1YGL240W GSC2P40989 1895 aa8.93□□□□□ -0.98
DOC1YGL240W SPT21P35209 758 aa8.92□□□□□ -0.98
DOC1YGL240W GLO3P38682 493 aaKnown RBP8.92□□□□□ -0.98
DOC1YGL240W SPR3P41901 512 aa8.92□□□□□ -0.98
DOC1YGL240W YFH7P43591 353 aa8.92□□□□□ -0.98
DOC1YGL240W FBP1P09201 348 aa8.91□□□□□ -0.98
DOC1YGL240W PAH1P32567 862 aa8.91□□□□□ -0.98
DOC1YGL240W TFA1P36100 482 aa8.91□□□□□ -0.98
DOC1YGL240W SSF1P38789 453 aaPredicted RBP8.91□□□□□ -0.98
DOC1YGL240W HAL5P38970 855 aaKnown RBP8.91□□□□□ -0.98
DOC1YGL240W HGH1P48362 394 aaKnown RBP8.91□□□□□ -0.98
DOC1YGL240W YNL193WP53870 558 aa8.91□□□□□ -0.98
DOC1YGL240W RPN7Q06103 429 aaKnown RBP8.91□□□□□ -0.98
DOC1YGL240W RAD53P22216 821 aa8.9□□□□□ -0.98
DOC1YGL240W TPS3P38426 1054 aaKnown RBP8.9□□□□□ -0.98
DOC1YGL240W PSF2P40359 213 aa8.9□□□□□ -0.98
DOC1YGL240W YIR042CP40586 236 aa8.9□□□□□ -0.98
DOC1YGL240W KTR3P38130 404 aaPredicted RBP8.89□□□□□ -0.99
DOC1YGL240W NSG2P53898 299 aa8.89□□□□□ -0.99
DOC1YGL240W PSF3Q12146 194 aa8.89□□□□□ -0.99
DOC1YGL240W RRI2Q12348 645 aa8.89□□□□□ -0.99
DOC1YGL240W PMA1P05030 918 aaKnown RBP8.88□□□□□ -0.99
DOC1YGL240W YDJ1P25491 409 aaKnown RBP8.88□□□□□ -0.99
DOC1YGL240W INM2Q05533 292 aa8.88□□□□□ -0.99
DOC1YGL240W ADP1P25371 1049 aa8.87□□□□□ -0.99
DOC1YGL240W ERG7P38604 731 aa8.87□□□□□ -0.99
DOC1YGL240W PTK1P36002 662 aaPredicted RBP8.86□□□□□ -0.99
DOC1YGL240W YGL242CP53066 181 aa8.86□□□□□ -0.99
DOC1YGL240W NCB2Q92317 146 aa8.86□□□□□ -0.99
DOC1YGL240W SNF3P10870 884 aa8.85□□□□□ -0.99
DOC1YGL240W YBL028CP38202 106 aa8.85□□□□□ -0.99
DOC1YGL240W ACA1P39970 489 aa8.85□□□□□ -0.99
DOC1YGL240W PIF1P07271 859 aa8.84□□□□□ -0.99
DOC1YGL240W NMD2P38798 1089 aaKnown RBP8.84□□□□□ -0.99
DOC1YGL240W APL6P46682 809 aa8.84□□□□□ -0.99
DOC1YGL240W CLA4P48562 842 aa8.84□□□□□ -0.99
DOC1YGL240W ALO1P54783 526 aaKnown RBP8.84□□□□□ -0.99
DOC1YGL240W YPR117WQ06116 2489 aa8.84□□□□□ -0.99
DOC1YGL240W TUB2P02557 457 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms