RNA–Protein interactions for RNA: YGL207W

SPT16, Transcript of Subunit of the heterodimeric FACT complex (Spt16p-Pob3p), yeast

Gene SPT16, Length 3,108 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT16	YGL207W	SPO20	Q04359	397 aa		4.18	□□□□□ -1.74
SPT16	YGL207W	UTP14	Q04500	899 aa	Known RBP	4.18	□□□□□ -1.74
SPT16	YGL207W	PHM6	Q05637	104 aa		4.18	□□□□□ -1.74
SPT16	YGL207W	CYB2	P00175	591 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	YKL222C	P35995	705 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	EXO84	P38261	753 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	YGR250C	P53316	781 aa	Known RBP	4.17	□□□□□ -1.74
SPT16	YGL207W	RNH1	Q04740	348 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	NUT2	Q06213	157 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	CHD1	P32657	1468 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	SUP35	P05453	685 aa	Known RBP	4.17	□□□□□ -1.74
SPT16	YGL207W	SMY2	P32909	740 aa	Known RBP	4.17	□□□□□ -1.74
SPT16	YGL207W	PEX6	P33760	1030 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	VHR2	P40041	505 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	SXM1	Q04175	944 aa	Known RBP	4.17	□□□□□ -1.74
SPT16	YGL207W	APL5	Q08951	932 aa	Known RBP	4.17	□□□□□ -1.74
SPT16	YGL207W	YPR204W	Q08995	1032 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	PGA3	Q12746	312 aa	Known RBP	4.17	□□□□□ -1.74
SPT16	YGL207W	RPL8A	P17076	256 aa	Known RBP	4.17	□□□□□ -1.74
SPT16	YGL207W	PSE1	P32337	1089 aa	Known RBP	4.17	□□□□□ -1.74
SPT16	YGL207W	ACP1	P32463	125 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	KTR2	P33550	425 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	CSE4	P36012	229 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	STS1	P38637	319 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	GTT3	P39996	337 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	NST1	P53935	1240 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	VTI1	Q04338	217 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	YDR286C	Q05530	114 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	TOS4	Q06266	489 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	MCD1	Q12158	566 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	SPT7	P35177	1332 aa		4.17	□□□□□ -1.74
SPT16	YGL207W	RGP1	P16664	663 aa		4.16	□□□□□ -1.74
SPT16	YGL207W	KIP2	P28743	706 aa		4.16	□□□□□ -1.74
SPT16	YGL207W	TAF5	P38129	798 aa		4.16	□□□□□ -1.74
SPT16	YGL207W	RXT2	P38255	430 aa		4.16	□□□□□ -1.74
SPT16	YGL207W	PEA2	P40091	420 aa		4.16	□□□□□ -1.74
SPT16	YGL207W	TGL3	P40308	642 aa		4.16	□□□□□ -1.74
SPT16	YGL207W	SRB7	P47822	140 aa		4.16	□□□□□ -1.74
SPT16	YGL207W	ATF2	P53296	535 aa		4.16	□□□□□ -1.74
SPT16	YGL207W	COG6	P53959	839 aa		4.16	□□□□□ -1.74
SPT16	YGL207W	PHO4	P07270	312 aa	Known RBP	4.16	□□□□□ -1.74
SPT16	YGL207W	ILS1	P09436	1072 aa	Known RBP	4.16	□□□□□ -1.74
SPT16	YGL207W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
SPT16	YGL207W	TIM23	P32897	222 aa		4.16	□□□□□ -1.74
SPT16	YGL207W	CAJ1	P39101	391 aa		4.16	□□□□□ -1.74
SPT16	YGL207W	BNI5	P53890	448 aa	Known RBP	4.16	□□□□□ -1.74
SPT16	YGL207W	YNL108C	P53929	270 aa		4.16	□□□□□ -1.74
SPT16	YGL207W	APP1	P53933	587 aa		4.16	□□□□□ -1.74
SPT16	YGL207W	TUF1	P02992	437 aa	Known RBP	4.15	□□□□□ -1.74
SPT16	YGL207W	UGA3	P26370	528 aa		4.15	□□□□□ -1.74
SPT16	YGL207W	SPR28	Q04921	423 aa		4.15	□□□□□ -1.74
SPT16	YGL207W	YGR161W-C	Q3E744	92 aa		4.15	□□□□□ -1.74
SPT16	YGL207W	SIT4	P20604	311 aa		4.15	□□□□□ -1.75
SPT16	YGL207W	DUT1	P33317	147 aa		4.15	□□□□□ -1.75
SPT16	YGL207W	RIC1	P40395	1056 aa		4.15	□□□□□ -1.75
SPT16	YGL207W	YNL011C	P53980	444 aa		4.15	□□□□□ -1.75
SPT16	YGL207W	CIA1	Q05583	330 aa		4.15	□□□□□ -1.75
SPT16	YGL207W	AOS1	Q06624	347 aa		4.15	□□□□□ -1.75
SPT16	YGL207W	DPB3	P27344	201 aa		4.15	□□□□□ -1.75
SPT16	YGL207W	ATG19	P35193	415 aa		4.15	□□□□□ -1.75
SPT16	YGL207W	NUP82	P40368	713 aa		4.15	□□□□□ -1.75
SPT16	YGL207W	AIM20	P40451	204 aa		4.15	□□□□□ -1.75
SPT16	YGL207W	SET2	P46995	733 aa	Known RBP	4.15	□□□□□ -1.75
SPT16	YGL207W	YGR053C	P53234	283 aa		4.15	□□□□□ -1.75
SPT16	YGL207W	UBX4	P54730	416 aa		4.15	□□□□□ -1.75
SPT16	YGL207W	FDC1	Q03034	503 aa		4.15	□□□□□ -1.75
SPT16	YGL207W	BRE4	Q07660	1125 aa		4.15	□□□□□ -1.75
SPT16	YGL207W	STE5	P32917	917 aa		4.14	□□□□□ -1.75
SPT16	YGL207W	GRX7	P38068	203 aa		4.14	□□□□□ -1.75
SPT16	YGL207W	UPF3	P48412	387 aa	Known RBP	4.14	□□□□□ -1.75
SPT16	YGL207W	HUL5	P53119	910 aa		4.14	□□□□□ -1.75
SPT16	YGL207W	ETT1	Q08421	412 aa	Known RBP	4.14	□□□□□ -1.75
SPT16	YGL207W	BMS1	Q08965	1183 aa	Known RBP	4.14	□□□□□ -1.75
SPT16	YGL207W	OSH2	Q12451	1283 aa		4.14	□□□□□ -1.75
SPT16	YGL207W	CBF2	P32504	956 aa		4.14	□□□□□ -1.75
SPT16	YGL207W	NDE1	P40215	560 aa		4.14	□□□□□ -1.75
SPT16	YGL207W	VTC4	P47075	721 aa		4.13	□□□□□ -1.75
SPT16	YGL207W	YNL034W	P53963	612 aa		4.13	□□□□□ -1.75
SPT16	YGL207W	YNL018C	P53976	612 aa		4.13	□□□□□ -1.75
SPT16	YGL207W	PGI1	P12709	554 aa	Known RBP	4.13	□□□□□ -1.75
SPT16	YGL207W	SRS2	P12954	1174 aa		4.13	□□□□□ -1.75
SPT16	YGL207W	GAP1	P19145	602 aa	Predicted RBP	4.13	□□□□□ -1.75
SPT16	YGL207W	RRP43	P25359	394 aa	Predicted RBP	4.13	□□□□□ -1.75
SPT16	YGL207W	GRX1	P25373	110 aa	Known RBP	4.13	□□□□□ -1.75
SPT16	YGL207W	DAL80	P26343	269 aa		4.13	□□□□□ -1.75
SPT16	YGL207W	HIR1	P32479	840 aa		4.13	□□□□□ -1.75
SPT16	YGL207W	SCT1	P32784	759 aa		4.13	□□□□□ -1.75
SPT16	YGL207W	MTC2	P34246	357 aa		4.13	□□□□□ -1.75
SPT16	YGL207W	APL2	P36000	726 aa	Predicted RBP	4.13	□□□□□ -1.75
SPT16	YGL207W	IRR1	P40541	1150 aa		4.13	□□□□□ -1.75
SPT16	YGL207W	CWH41	P53008	833 aa		4.13	□□□□□ -1.75
SPT16	YGL207W	MPC54	Q08550	464 aa		4.13	□□□□□ -1.75
SPT16	YGL207W	MET6	P05694	767 aa	Known RBP	4.12	□□□□□ -1.75
SPT16	YGL207W	YBL028C	P38202	106 aa		4.12	□□□□□ -1.75
SPT16	YGL207W	LRP1	P38801	184 aa	Known RBP	4.12	□□□□□ -1.75
SPT16	YGL207W	DSL1	P53847	754 aa		4.12	□□□□□ -1.75
SPT16	YGL207W	TAF8	Q03750	510 aa		4.12	□□□□□ -1.75
SPT16	YGL207W	SND1	Q04007	877 aa		4.12	□□□□□ -1.75
SPT16	YGL207W	MRD1	Q06106	887 aa	Known RBP	4.12	□□□□□ -1.75
SPT16	YGL207W	APC5	Q08683	685 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms