RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W GCR2Q01722 534 aa6.41□□□□□ -1.38
CDC43YGL155W BUD20Q08004 166 aaPredicted RBP6.41□□□□□ -1.38
CDC43YGL155W YIL177CP40434 1758 aa6.41□□□□□ -1.38
CDC43YGL155W YJL225CP40889 1758 aa6.41□□□□□ -1.38
CDC43YGL155W DLD1P32891 587 aa6.4□□□□□ -1.38
CDC43YGL155W SLN1P39928 1220 aaPredicted RBP6.4□□□□□ -1.38
CDC43YGL155W YOL057WQ08225 711 aa6.4□□□□□ -1.38
CDC43YGL155W SLM3Q12093 417 aa6.4□□□□□ -1.38
CDC43YGL155W CDC16P09798 840 aa6.39□□□□□ -1.39
CDC43YGL155W GLC3P32775 704 aa6.39□□□□□ -1.39
CDC43YGL155W THI12P42883 340 aa6.39□□□□□ -1.39
CDC43YGL155W THI5P43534 340 aa6.39□□□□□ -1.39
CDC43YGL155W THI11P47183 340 aa6.39□□□□□ -1.39
CDC43YGL155W THI13Q07748 340 aa6.39□□□□□ -1.39
CDC43YGL155W NUP145P49687 1317 aa6.39□□□□□ -1.39
CDC43YGL155W ROM2P51862 1356 aaKnown RBP6.39□□□□□ -1.39
CDC43YGL155W TY1A-DR4O74302 440 aa6.38□□□□□ -1.39
CDC43YGL155W NOT3P06102 836 aaKnown RBP6.38□□□□□ -1.39
CDC43YGL155W VAS1P07806 1104 aaKnown RBP6.38□□□□□ -1.39
CDC43YGL155W TY1A-HP0C2I4 478 aaKnown RBP6.38□□□□□ -1.39
CDC43YGL155W TY1A-AP0CX57 440 aa6.38□□□□□ -1.39
CDC43YGL155W TY1A-PR1P0CX58 440 aa6.38□□□□□ -1.39
CDC43YGL155W TY1A-ORP0CX59 440 aa6.38□□□□□ -1.39
CDC43YGL155W TY1A-PR2P0CX60 440 aa6.38□□□□□ -1.39
CDC43YGL155W TY1A-DR5P0CX65 440 aa6.38□□□□□ -1.39
CDC43YGL155W TY1A-ER2P0CX66 440 aa6.38□□□□□ -1.39
CDC43YGL155W TY1A-GR3P0CX67 440 aa6.38□□□□□ -1.39
CDC43YGL155W TY1A-LR1P0CX68 440 aa6.38□□□□□ -1.39
CDC43YGL155W TY1A-MR2P0CX69 440 aa6.38□□□□□ -1.39
CDC43YGL155W MRP7P12687 371 aa6.38□□□□□ -1.39
CDC43YGL155W PRP45P28004 379 aaPredicted RBP6.38□□□□□ -1.39
CDC43YGL155W GCD7P32502 381 aaPredicted RBP6.38□□□□□ -1.39
CDC43YGL155W TY1A-JR2P47099 440 aa6.38□□□□□ -1.39
CDC43YGL155W TEA1P47988 759 aa6.38□□□□□ -1.39
CDC43YGL155W YNR021WP53723 404 aaKnown RBP6.38□□□□□ -1.39
CDC43YGL155W TY1A-DR1Q03856 440 aa6.38□□□□□ -1.39
CDC43YGL155W TY1A-ML1Q04706 440 aaKnown RBP6.38□□□□□ -1.39
CDC43YGL155W TY1A-BRQ12217 440 aa6.38□□□□□ -1.39
CDC43YGL155W TY1A-NL2Q12470 440 aa6.38□□□□□ -1.39
CDC43YGL155W TY1A-GR2Q12485 440 aa6.38□□□□□ -1.39
CDC43YGL155W RNR2P09938 399 aaKnown RBP6.37□□□□□ -1.39
CDC43YGL155W RAD4P14736 754 aa6.37□□□□□ -1.39
CDC43YGL155W BRN1P38170 754 aa6.37□□□□□ -1.39
CDC43YGL155W BDP1P46678 594 aa6.37□□□□□ -1.39
CDC43YGL155W DNM1P54861 757 aa6.37□□□□□ -1.39
CDC43YGL155W TCB1Q12466 1186 aa6.37□□□□□ -1.39
CDC43YGL155W SDH2P21801 266 aa6.36□□□□□ -1.39
CDC43YGL155W RAD24P32641 659 aa6.36□□□□□ -1.39
CDC43YGL155W ERF2Q06551 359 aa6.36□□□□□ -1.39
CDC43YGL155W NCB2Q92317 146 aa6.36□□□□□ -1.39
CDC43YGL155W SEC2P17065 759 aa6.35□□□□□ -1.39
CDC43YGL155W CLB5P30283 435 aa6.35□□□□□ -1.39
CDC43YGL155W EBP2P36049 427 aaKnown RBP6.35□□□□□ -1.39
CDC43YGL155W BDH2P39713 417 aa6.35□□□□□ -1.39
CDC43YGL155W BOI2P39969 1040 aa6.35□□□□□ -1.39
CDC43YGL155W XKS1P42826 600 aa6.35□□□□□ -1.39
CDC43YGL155W MSB3P48566 633 aaPredicted RBP6.35□□□□□ -1.39
CDC43YGL155W MEC3Q02574 474 aa6.35□□□□□ -1.39
CDC43YGL155W YDR306CQ06640 478 aa6.35□□□□□ -1.39
CDC43YGL155W CST6P40535 587 aa6.34□□□□□ -1.39
CDC43YGL155W NIS1P53939 407 aa6.34□□□□□ -1.39
CDC43YGL155W BIK1P11709 440 aa6.33□□□□□ -1.4
CDC43YGL155W KEX2P13134 814 aa6.33□□□□□ -1.4
CDC43YGL155W SSF1P38789 453 aaPredicted RBP6.33□□□□□ -1.4
CDC43YGL155W RSM25P40496 264 aa6.33□□□□□ -1.4
CDC43YGL155W TCB2P48231 1178 aa6.33□□□□□ -1.4
CDC43YGL155W PIL1P53252 339 aaKnown RBP6.33□□□□□ -1.4
CDC43YGL155W YGR122WP53272 402 aa6.33□□□□□ -1.4
CDC43YGL155W HST1P53685 503 aa6.33□□□□□ -1.4
CDC43YGL155W GYP1Q08484 637 aa6.33□□□□□ -1.4
CDC43YGL155W PRT1P06103 763 aaKnown RBP6.32□□□□□ -1.4
CDC43YGL155W KNS1P32350 737 aaPredicted RBP6.32□□□□□ -1.4
CDC43YGL155W NUP133P36161 1157 aa6.32□□□□□ -1.4
CDC43YGL155W HXT13P39924 564 aa6.32□□□□□ -1.4
CDC43YGL155W FPR4Q06205 392 aaPredicted RBP6.32□□□□□ -1.4
CDC43YGL155W RSF2P46974 1380 aa6.31□□□□□ -1.4
CDC43YGL155W TPM1P17536 199 aaKnown RBP6.31□□□□□ -1.4
CDC43YGL155W GCD11P32481 527 aaKnown RBP6.31□□□□□ -1.4
CDC43YGL155W NPL4P33755 580 aa6.31□□□□□ -1.4
CDC43YGL155W HYR1P40581 163 aaKnown RBP6.31□□□□□ -1.4
CDC43YGL155W KRI1P42846 591 aaKnown RBP6.31□□□□□ -1.4
CDC43YGL155W YJR008WP47085 338 aa6.31□□□□□ -1.4
CDC43YGL155W VPS20Q04272 221 aa6.31□□□□□ -1.4
CDC43YGL155W LCD1Q04377 747 aa6.31□□□□□ -1.4
CDC43YGL155W INP54Q08227 384 aaKnown RBP6.31□□□□□ -1.4
CDC43YGL155W PDR18P53756 1333 aa6.3□□□□□ -1.4
CDC43YGL155W SUP35P05453 685 aaKnown RBP6.3□□□□□ -1.4
CDC43YGL155W SIT4P20604 311 aa6.3□□□□□ -1.4
CDC43YGL155W SWC3P31376 625 aa6.3□□□□□ -1.4
CDC43YGL155W NPA3P47122 385 aa6.3□□□□□ -1.4
CDC43YGL155W MLC1P53141 149 aa6.3□□□□□ -1.4
CDC43YGL155W ATF2P53296 535 aa6.3□□□□□ -1.4
CDC43YGL155W HXT17P53631 564 aa6.3□□□□□ -1.4
CDC43YGL155W BRE1Q07457 700 aaKnown RBP6.3□□□□□ -1.4
CDC43YGL155W ALE1Q08548 619 aa6.3□□□□□ -1.4
CDC43YGL155W AIM44Q99299 758 aa6.3□□□□□ -1.4
CDC43YGL155W ECM21P38167 1117 aaKnown RBP6.29□□□□□ -1.4
CDC43YGL155W UBP12P39538 1254 aa6.29□□□□□ -1.4
CDC43YGL155W RSC1P53236 928 aa6.29□□□□□ -1.4
CDC43YGL155W HRQ1Q05549 1077 aa6.29□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms