RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	YFL034W	P43564	1073 aa		4.02	□□□□□ -1.77
SCW11	YGL028C	NTH2	P35172	780 aa		4.01	□□□□□ -1.77
SCW11	YGL028C	BRE4	Q07660	1125 aa		4.01	□□□□□ -1.77
SCW11	YGL028C	BIO2	P32451	375 aa		4	□□□□□ -1.77
SCW11	YGL028C	SKP1	P52286	194 aa		4	□□□□□ -1.77
SCW11	YGL028C	ENO2	P00925	437 aa	Known RBP	3.99	□□□□□ -1.77
SCW11	YGL028C	PKC1	P24583	1151 aa		3.99	□□□□□ -1.77
SCW11	YGL028C	RSC6	P25632	483 aa		3.99	□□□□□ -1.77
SCW11	YGL028C	YGR130C	P53278	816 aa		3.99	□□□□□ -1.77
SCW11	YGL028C	SAF1	P38352	637 aa		3.99	□□□□□ -1.77
SCW11	YGL028C	CUS1	Q02554	436 aa	Predicted RBP	3.99	□□□□□ -1.77
SCW11	YGL028C	SUP45	P12385	437 aa	Known RBP	3.98	□□□□□ -1.77
SCW11	YGL028C	CHS2	P14180	963 aa		3.98	□□□□□ -1.77
SCW11	YGL028C	NGR1	P32831	672 aa	Known RBP	3.98	□□□□□ -1.77
SCW11	YGL028C	YNR040W	P53736	256 aa		3.97	□□□□□ -1.77
SCW11	YGL028C	YNL108C	P53929	270 aa		3.97	□□□□□ -1.77
SCW11	YGL028C	MAG2	Q06436	670 aa	Known RBP	3.97	□□□□□ -1.77
SCW11	YGL028C	RDS2	P19541	446 aa	Known RBP	3.96	□□□□□ -1.78
SCW11	YGL028C	UBP5	P39944	805 aa		3.96	□□□□□ -1.78
SCW11	YGL028C	MRP10	O75012	95 aa		3.95	□□□□□ -1.78
SCW11	YGL028C	CYT1	P07143	309 aa		3.95	□□□□□ -1.78
SCW11	YGL028C	APM2	P38700	605 aa		3.95	□□□□□ -1.78
SCW11	YGL028C	RIM21	P48565	533 aa		3.95	□□□□□ -1.78
SCW11	YGL028C	SLP1	Q12232	587 aa		3.95	□□□□□ -1.78
SCW11	YGL028C	PDI1	P17967	522 aa	Known RBP	3.95	□□□□□ -1.78
SCW11	YGL028C	AKR1	P39010	764 aa		3.95	□□□□□ -1.78
SCW11	YGL028C	CYC7	P00045	113 aa		3.94	□□□□□ -1.78
SCW11	YGL028C	RNQ1	P25367	405 aa		3.94	□□□□□ -1.78
SCW11	YGL028C	KAP122	P32767	1081 aa		3.94	□□□□□ -1.78
SCW11	YGL028C	UTP4	Q06679	776 aa	Known RBP	3.94	□□□□□ -1.78
SCW11	YGL028C	TY1A-NL1	Q12391	440 aa	Known RBP	3.94	□□□□□ -1.78
SCW11	YGL028C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.93	□□□□□ -1.78	not detected
SCW11	YGL028C	TY4B-P	A0A0B7P3V8	1104 aa		3.92	□□□□□ -1.78
SCW11	YGL028C	IDI1	P15496	288 aa		3.92	□□□□□ -1.78
SCW11	YGL028C	NAM7	P30771	971 aa	Known RBP	3.92	□□□□□ -1.78
SCW11	YGL028C	TED1	P40533	473 aa		3.92	□□□□□ -1.78
SCW11	YGL028C	SPO74	P45819	413 aa		3.92	□□□□□ -1.78
SCW11	YGL028C	TY4A-H	Q6Q5P6	413 aa		3.92	□□□□□ -1.78
SCW11	YGL028C	YJL007C	P47080	104 aa		3.92	□□□□□ -1.78
SCW11	YGL028C	TSC13	Q99190	310 aa		3.92	□□□□□ -1.78
SCW11	YGL028C	RPC31	P17890	251 aa		3.91	□□□□□ -1.78
SCW11	YGL028C	SCD5	P34758	872 aa		3.91	□□□□□ -1.78
SCW11	YGL028C	REC8	Q12188	680 aa		3.9	□□□□□ -1.79
SCW11	YGL028C	YKL222C	P35995	705 aa		3.89	□□□□□ -1.79
SCW11	YGL028C	GIP2	P40036	548 aa		3.89	□□□□□ -1.79
SCW11	YGL028C	DSE4	P53753	1117 aa		3.88	□□□□□ -1.79
SCW11	YGL028C	YCR015C	P25616	317 aa		3.88	□□□□□ -1.79
SCW11	YGL028C	HXT5	P38695	592 aa		3.88	□□□□□ -1.79
SCW11	YGL028C	YER156C	P40093	338 aa	Known RBP	3.88	□□□□□ -1.79
SCW11	YGL028C	SOK2	P53438	785 aa	Predicted RBP	3.88	□□□□□ -1.79
SCW11	YGL028C	SEG2	P34250	1132 aa		3.87	□□□□□ -1.79
SCW11	YGL028C	QDR2	P40474	542 aa		3.87	□□□□□ -1.79
SCW11	YGL028C	ITC1	P53125	1264 aa		3.87	□□□□□ -1.79
SCW11	YGL028C	UBP1	P25037	809 aa		3.85	□□□□□ -1.79
SCW11	YGL028C	SEA4	P38164	1038 aa		3.85	□□□□□ -1.79
SCW11	YGL028C	BIM1	P40013	344 aa		3.85	□□□□□ -1.79
SCW11	YGL028C	MSB1	P21339	1137 aa	Known RBP	3.84	□□□□□ -1.79
SCW11	YGL028C	LRG1	P35688	1017 aa		3.84	□□□□□ -1.79
SCW11	YGL028C	NIT1	P40447	199 aa		3.84	□□□□□ -1.79
SCW11	YGL028C	SDH1	Q00711	640 aa		3.84	□□□□□ -1.79
SCW11	YGL028C	MRX10	Q05648	414 aa		3.84	□□□□□ -1.79
SCW11	YGL028C	ENO1	P00924	437 aa	Known RBP	3.84	□□□□□ -1.8
SCW11	YGL028C	TIF1	P10081	395 aa	Known RBP	3.84	□□□□□ -1.8
SCW11	YGL028C	RTG2	P32608	588 aa	Known RBP	3.84	□□□□□ -1.8
SCW11	YGL028C	ATG32	P40458	529 aa		3.84	□□□□□ -1.8
SCW11	YGL028C	RPL34B	P40525	121 aa	Known RBP	3.84	□□□□□ -1.8
SCW11	YGL028C	HGH1	P48362	394 aa	Known RBP	3.84	□□□□□ -1.8
SCW11	YGL028C	POL12	P38121	705 aa	Predicted RBP	3.83	□□□□□ -1.8
SCW11	YGL028C	ECL1	P48235	211 aa		3.82	□□□□□ -1.8
SCW11	YGL028C	ACS2	P52910	683 aa	Known RBP	3.82	□□□□□ -1.8
SCW11	YGL028C	RSC2	Q06488	889 aa		3.82	□□□□□ -1.8
SCW11	YGL028C	YOR296W	Q08748	1289 aa		3.82	□□□□□ -1.8
SCW11	YGL028C	YJL181W	P46987	611 aa		3.81	□□□□□ -1.8
SCW11	YGL028C	ESC8	Q08119	714 aa		3.81	□□□□□ -1.8
SCW11	YGL028C	PHO87	P25360	923 aa		3.81	□□□□□ -1.8
SCW11	YGL028C	PRP43	P53131	767 aa	Known RBP	3.81	□□□□□ -1.8
SCW11	YGL028C	GIS1	Q03833	894 aa		3.81	□□□□□ -1.8
SCW11	YGL028C	GAS4	Q08271	471 aa		3.81	□□□□□ -1.8
SCW11	YGL028C	PEP12	P32854	288 aa		3.8	□□□□□ -1.8
SCW11	YGL028C	PAN5	P38787	379 aa		3.8	□□□□□ -1.8
SCW11	YGL028C	KTR7	P40504	517 aa		3.8	□□□□□ -1.8
SCW11	YGL028C	DFG16	Q99234	619 aa		3.8	□□□□□ -1.8
SCW11	YGL028C	HAP4	P14064	554 aa		3.79	□□□□□ -1.8
SCW11	YGL028C	GAS1	P22146	559 aa	Known RBP	3.79	□□□□□ -1.8
SCW11	YGL028C	BSD2	P38356	321 aa		3.79	□□□□□ -1.8
SCW11	YGL028C	GCD1	P09032	578 aa	Predicted RBP	3.78	□□□□□ -1.8
SCW11	YGL028C	PPT1	P53043	513 aa		3.78	□□□□□ -1.8
SCW11	YGL028C	TAF1	P46677	1066 aa		3.77	□□□□□ -1.81
SCW11	YGL028C	NCE103	P53615	221 aa		3.77	□□□□□ -1.81
SCW11	YGL028C	MAE1	P36013	669 aa	Known RBP	3.77	□□□□□ -1.81
SCW11	YGL028C	GIP1	P38229	639 aa		3.77	□□□□□ -1.81
SCW11	YGL028C	DYS1	P38791	387 aa		3.77	□□□□□ -1.81
SCW11	YGL028C	GIP4	P39732	760 aa		3.77	□□□□□ -1.81
SCW11	YGL028C	VMA3	P25515	160 aa		3.76	□□□□□ -1.81
SCW11	YGL028C	YHL008C	P38750	627 aa		3.74	□□□□□ -1.81
SCW11	YGL028C	INP51	P40559	946 aa	Known RBP	3.74	□□□□□ -1.81
SCW11	YGL028C	LEM3	P42838	414 aa		3.74	□□□□□ -1.81
SCW11	YGL028C	GUP1	P53154	560 aa		3.74	□□□□□ -1.81
SCW11	YGL028C	CAB1	Q04430	367 aa		3.74	□□□□□ -1.81
SCW11	YGL028C	GIC2	Q06648	383 aa		3.74	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 57 ms