RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C BDS1Q08347 646 aa5.46□□□□□ -1.54
SPB4YFL002C SPT16P32558 1035 aaKnown RBP5.45□□□□□ -1.54
SPB4YFL002C OXR1Q08952 273 aa5.45□□□□□ -1.54
SPB4YFL002C CYC8P14922 966 aa5.44□□□□□ -1.54
SPB4YFL002C UTR2P32623 467 aa5.44□□□□□ -1.54
SPB4YFL002C KTR2P33550 425 aa5.44□□□□□ -1.54
SPB4YFL002C ISU1Q03020 165 aa5.44□□□□□ -1.54
SPB4YFL002C PET112P33893 541 aa5.44□□□□□ -1.54
SPB4YFL002C BUD6P41697 788 aa5.44□□□□□ -1.54
SPB4YFL002C EMW1P42842 904 aaKnown RBP5.44□□□□□ -1.54
SPB4YFL002C ATG36P46983 293 aa5.44□□□□□ -1.54
SPB4YFL002C GBP2P25555 427 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
SPB4YFL002C GAR1P28007 205 aaKnown RBP5.43□□□□□ -1.54
SPB4YFL002C HXT5P38695 592 aa5.43□□□□□ -1.54
SPB4YFL002C AIR1P40507 360 aaKnown RBP5.43□□□□□ -1.54
SPB4YFL002C SUT1P53032 299 aaKnown RBP5.43□□□□□ -1.54
SPB4YFL002C MRPL33P20084 86 aa5.42□□□□□ -1.54
SPB4YFL002C BRE2P43132 505 aa5.42□□□□□ -1.54
SPB4YFL002C CWC24P53769 259 aa5.42□□□□□ -1.54
SPB4YFL002C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
SPB4YFL002C CDC53Q12018 815 aaKnown RBP5.42□□□□□ -1.54
SPB4YFL002C RAD2P07276 1031 aa5.41□□□□□ -1.54
SPB4YFL002C KIP2P28743 706 aa5.41□□□□□ -1.54
SPB4YFL002C SMC1P32908 1225 aa5.41□□□□□ -1.54
SPB4YFL002C TBS1P38114 1094 aa5.41□□□□□ -1.54
SPB4YFL002C CIC1P38779 376 aaKnown RBP5.41□□□□□ -1.54
SPB4YFL002C RSC4Q02206 625 aa5.41□□□□□ -1.54
SPB4YFL002C NOC3Q07896 663 aaPredicted RBP5.41□□□□□ -1.54
SPB4YFL002C YOR131CQ12486 218 aa5.41□□□□□ -1.54
SPB4YFL002C HXK1P04806 485 aaKnown RBP5.41□□□□□ -1.54
SPB4YFL002C DAT1P13483 248 aaKnown RBP5.41□□□□□ -1.54
SPB4YFL002C FBP26P32604 452 aa5.41□□□□□ -1.54
SPB4YFL002C PBP2P38151 413 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
SPB4YFL002C RTS3P53289 263 aa5.41□□□□□ -1.54
SPB4YFL002C APP1P53933 587 aa5.41□□□□□ -1.54
SPB4YFL002C TOS4Q06266 489 aa5.41□□□□□ -1.54
SPB4YFL002C BDF2Q07442 638 aa5.41□□□□□ -1.54
SPB4YFL002C TOM20P35180 183 aa5.4□□□□□ -1.54
SPB4YFL002C CLA4P48562 842 aa5.4□□□□□ -1.54
SPB4YFL002C MTO1P53070 669 aa5.4□□□□□ -1.54
SPB4YFL002C GCR2Q01722 534 aa5.4□□□□□ -1.54
SPB4YFL002C MCM1P11746 286 aa5.39□□□□□ -1.55
SPB4YFL002C SCD5P34758 872 aa5.39□□□□□ -1.55
SPB4YFL002C TAT2P38967 592 aa5.39□□□□□ -1.55
SPB4YFL002C HXT8P40886 569 aa5.39□□□□□ -1.55
SPB4YFL002C POB3Q04636 552 aaKnown RBP5.39□□□□□ -1.55
SPB4YFL002C BSC2Q05611 235 aa5.39□□□□□ -1.55
SPB4YFL002C UBX5Q06682 500 aa5.39□□□□□ -1.55
SPB4YFL002C TSR4P25040 408 aa5.39□□□□□ -1.55
SPB4YFL002C GRX1P25373 110 aaKnown RBP5.39□□□□□ -1.55
SPB4YFL002C YJR008WP47085 338 aa5.39□□□□□ -1.55
SPB4YFL002C FAA3P39002 694 aa5.38□□□□□ -1.55
SPB4YFL002C YPQ2Q06328 317 aa5.38□□□□□ -1.55
SPB4YFL002C WTM2Q12206 467 aa5.38□□□□□ -1.55
SPB4YFL002C RPP2BP02400 110 aaKnown RBP5.37□□□□□ -1.55
SPB4YFL002C STE6P12866 1290 aa5.37□□□□□ -1.55
SPB4YFL002C VMA3P25515 160 aa5.37□□□□□ -1.55
SPB4YFL002C MKS1P34072 584 aa5.37□□□□□ -1.55
SPB4YFL002C NUG1P40010 520 aaKnown RBP5.37□□□□□ -1.55
SPB4YFL002C MRPS18P42847 217 aa5.37□□□□□ -1.55
SPB4YFL002C HUL5P53119 910 aa5.37□□□□□ -1.55
SPB4YFL002C SYH1Q02875 849 aaKnown RBP5.37□□□□□ -1.55
SPB4YFL002C FRK1Q03002 865 aaPredicted RBP5.37□□□□□ -1.55
SPB4YFL002C MCD1Q12158 566 aa5.37□□□□□ -1.55
SPB4YFL002C CDC34P14682 295 aa5.36□□□□□ -1.55
SPB4YFL002C GDE1Q02979 1223 aa5.36□□□□□ -1.55
SPB4YFL002C DAL4Q04895 635 aa5.36□□□□□ -1.55
SPB4YFL002C PRE9P23638 258 aaKnown RBP5.35□□□□□ -1.55
SPB4YFL002C LDH1P38139 375 aa5.35□□□□□ -1.55
SPB4YFL002C YHL008CP38750 627 aa5.35□□□□□ -1.55
SPB4YFL002C INP54Q08227 384 aaKnown RBP5.35□□□□□ -1.55
SPB4YFL002C MET6P05694 767 aaKnown RBP5.34□□□□□ -1.55
SPB4YFL002C RAD55P38953 406 aa5.34□□□□□ -1.55
SPB4YFL002C NTA1P40354 457 aa5.34□□□□□ -1.55
SPB4YFL002C YGL081WP53156 320 aa5.34□□□□□ -1.55
SPB4YFL002C YGR053CP53234 283 aa5.34□□□□□ -1.55
SPB4YFL002C YCS4Q06156 1176 aa5.34□□□□□ -1.55
SPB4YFL002C UTP4Q06679 776 aaKnown RBP5.34□□□□□ -1.55
SPB4YFL002C SSB1P11484 613 aaKnown RBP5.34□□□□□ -1.55
SPB4YFL002C MNN1P39106 762 aa5.34□□□□□ -1.55
SPB4YFL002C SSB2P40150 613 aaKnown RBP5.34□□□□□ -1.55
SPB4YFL002C SUM1P46676 1062 aa5.34□□□□□ -1.55
SPB4YFL002C FAA4P47912 694 aaKnown RBP5.34□□□□□ -1.55
SPB4YFL002C PPM2Q08282 695 aa5.34□□□□□ -1.55
SPB4YFL002C PRP40P33203 583 aaKnown RBP5.33□□□□□ -1.56
SPB4YFL002C DYS1P38791 387 aa5.33□□□□□ -1.56
SPB4YFL002C FIR1P40020 876 aa5.33□□□□□ -1.56
SPB4YFL002C NUP82P40368 713 aa5.33□□□□□ -1.56
SPB4YFL002C RGD2P43556 714 aa5.33□□□□□ -1.56
SPB4YFL002C UTP14Q04500 899 aaKnown RBP5.33□□□□□ -1.56
SPB4YFL002C PUS5Q06244 254 aa5.33□□□□□ -1.56
SPB4YFL002C YGR161W-CQ3E744 92 aa5.33□□□□□ -1.56
SPB4YFL002C RAD4P14736 754 aa5.32□□□□□ -1.56
SPB4YFL002C GRX4P32642 244 aa5.32□□□□□ -1.56
SPB4YFL002C IRS4P36115 615 aaKnown RBP5.32□□□□□ -1.56
SPB4YFL002C UTP7P40055 554 aaKnown RBP5.32□□□□□ -1.56
SPB4YFL002C NAN1Q02931 896 aaKnown RBP5.32□□□□□ -1.56
SPB4YFL002C TDA5Q06417 326 aaKnown RBP5.32□□□□□ -1.56
SPB4YFL002C OPI10Q08202 246 aa5.32□□□□□ -1.56
SPB4YFL002C KAR2P16474 682 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 73.3 ms