RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCC4	YER147C	PGA3	Q12746	312 aa	Known RBP	13.86	□□□□□ -0.19
SCC4	YER147C	MRPL10	P36520	322 aa		13.85	□□□□□ -0.19
SCC4	YER147C	ENT3	P47160	408 aa		13.85	□□□□□ -0.19
SCC4	YER147C	YAH1	Q12184	172 aa	Known RBP	13.85	□□□□□ -0.19
SCC4	YER147C	SAC3	P46674	1301 aa		13.85	□□□□□ -0.19
SCC4	YER147C	OPI1	P21957	404 aa		13.84	□□□□□ -0.19
SCC4	YER147C	DOT5	P40553	215 aa		13.84	□□□□□ -0.19
SCC4	YER147C	YNL193W	P53870	558 aa		13.84	□□□□□ -0.19
SCC4	YER147C	FOX2	Q02207	900 aa	Known RBP	13.84	□□□□□ -0.19
SCC4	YER147C	YHL017W	P38745	532 aa		13.84	□□□□□ -0.19
SCC4	YER147C	SER1	P33330	395 aa	Known RBP	13.83	□□□□□ -0.2
SCC4	YER147C	NPR3	P38742	1146 aa		13.83	□□□□□ -0.2
SCC4	YER147C	UTP10	P42945	1769 aa	Known RBP	13.83	□□□□□ -0.2
SCC4	YER147C	RDS1	P25611	832 aa		13.82	□□□□□ -0.2
SCC4	YER147C	YKR075C	P36155	307 aa		13.82	□□□□□ -0.2
SCC4	YER147C	MPE1	P35728	441 aa	Known RBP	13.82	□□□□□ -0.2
SCC4	YER147C	ESC2	Q06340	456 aa		13.82	□□□□□ -0.2
SCC4	YER147C	YKE2	P52553	114 aa		13.81	□□□□□ -0.2
SCC4	YER147C	DDP1	Q99321	188 aa	Known RBP	13.81	□□□□□ -0.2
SCC4	YER147C	TRS33	Q99394	268 aa		13.81	□□□□□ -0.2
SCC4	YER147C	MATALPHA2	P0CY08	210 aa		13.8	□□□□□ -0.2
SCC4	YER147C	HMLALPHA2	P0CY09	210 aa		13.8	□□□□□ -0.2
SCC4	YER147C	PEP3	P27801	918 aa		13.8	□□□□□ -0.2
SCC4	YER147C	MAL33	P38157	468 aa		13.8	□□□□□ -0.2
SCC4	YER147C	NOP58	Q12499	511 aa	Known RBP	13.8	□□□□□ -0.2
SCC4	YER147C	FBP26	P32604	452 aa		13.79	□□□□□ -0.2
SCC4	YER147C	SSL2	Q00578	843 aa		13.79	□□□□□ -0.2
SCC4	YER147C	ADR1	P07248	1323 aa		13.79	□□□□□ -0.2
SCC4	YER147C	BBC1	P47068	1157 aa		13.78	□□□□□ -0.2
SCC4	YER147C	ESF1	Q06344	628 aa	Known RBP	13.78	□□□□□ -0.2
SCC4	YER147C	CYC8	P14922	966 aa		13.77	□□□□□ -0.21
SCC4	YER147C	ATE1	P16639	503 aa		13.77	□□□□□ -0.21
SCC4	YER147C	IMP2'	P32351	346 aa		13.77	□□□□□ -0.21
SCC4	YER147C	YMR147W	P40218	223 aa	Known RBP	13.77	□□□□□ -0.21
SCC4	YER147C	SGD1	Q06132	899 aa		13.77	□□□□□ -0.21
SCC4	YER147C	LAM4	P38800	1345 aa		13.77	□□□□□ -0.21
SCC4	YER147C	RFC5	P38251	354 aa		13.76	□□□□□ -0.21
SCC4	YER147C	PKH3	Q03306	898 aa	Predicted RBP	13.76	□□□□□ -0.21
SCC4	YER147C	RRI2	Q12348	645 aa		13.76	□□□□□ -0.21
SCC4	YER147C	BUD6	P41697	788 aa		13.76	□□□□□ -0.21
SCC4	YER147C	ECM23	Q02710	187 aa		13.76	□□□□□ -0.21
SCC4	YER147C	YLR407W	Q06070	228 aa		13.76	□□□□□ -0.21
SCC4	YER147C	NYV1	Q12255	253 aa		13.75	□□□□□ -0.21
SCC4	YER147C	LAM6	Q08001	693 aa		13.74	□□□□□ -0.21
SCC4	YER147C	HAT1	Q12341	374 aa		13.74	□□□□□ -0.21
SCC4	YER147C	SES1	P07284	462 aa	Known RBP	13.74	□□□□□ -0.21
SCC4	YER147C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	13.74	□□□□□ -0.21	not detected
SCC4	YER147C	SIS2	P36024	562 aa		13.74	□□□□□ -0.21
SCC4	YER147C	TIM50	Q02776	476 aa		13.74	□□□□□ -0.21
SCC4	YER147C	SSF2	Q12153	453 aa	Predicted RBP	13.74	□□□□□ -0.21
SCC4	YER147C	PIF1	P07271	859 aa		13.73	□□□□□ -0.21
SCC4	YER147C	GPA1	P08539	472 aa		13.73	□□□□□ -0.21
SCC4	YER147C	STU2	P46675	888 aa		13.73	□□□□□ -0.21
SCC4	YER147C	MET1	P36150	593 aa		13.72	□□□□□ -0.21
SCC4	YER147C	LEO1	P38439	464 aa		13.72	□□□□□ -0.21
SCC4	YER147C	HAL5	P38970	855 aa	Known RBP	13.72	□□□□□ -0.21
SCC4	YER147C	YER130C	P39959	443 aa		13.72	□□□□□ -0.21
SCC4	YER147C	TAH18	Q12181	623 aa		13.72	□□□□□ -0.21
SCC4	YER147C	MSB4	Q12317	492 aa		13.72	□□□□□ -0.21
SCC4	YER147C	POM152	P39685	1337 aa		13.72	□□□□□ -0.21
SCC4	YER147C	TPM2	P40414	161 aa		13.72	□□□□□ -0.21
SCC4	YER147C	ENP2	P48234	707 aa	Known RBP	13.71	□□□□□ -0.21
SCC4	YER147C	YPT11	P48559	417 aa		13.71	□□□□□ -0.21
SCC4	YER147C	UBP10	P53874	792 aa	Predicted RBP	13.71	□□□□□ -0.21
SCC4	YER147C	GRE2	Q12068	342 aa	Known RBP	13.71	□□□□□ -0.21
SCC4	YER147C	RRM3	P38766	723 aa		13.7	□□□□□ -0.22
SCC4	YER147C	PGI1	P12709	554 aa	Known RBP	13.69	□□□□□ -0.22
SCC4	YER147C	KAR5	Q04746	504 aa		13.69	□□□□□ -0.22
SCC4	YER147C	RFT1	P38206	574 aa	Predicted RBP	13.68	□□□□□ -0.22
SCC4	YER147C	CRG1	P38892	291 aa	RIP-Chip data	13.68	□□□□□ -0.22	not detected
SCC4	YER147C	EPL1	P43572	832 aa		13.68	□□□□□ -0.22
SCC4	YER147C	PRP40	P33203	583 aa	Known RBP	13.67	□□□□□ -0.22
SCC4	YER147C	VMS1	Q04311	632 aa	Known RBP	13.67	□□□□□ -0.22
SCC4	YER147C	SPN1	Q06505	410 aa	Predicted RBP	13.67	□□□□□ -0.22
SCC4	YER147C	GLO3	P38682	493 aa	Known RBP	13.67	□□□□□ -0.22
SCC4	YER147C	ALD3	P54114	506 aa		13.67	□□□□□ -0.22
SCC4	YER147C	HOS3	Q02959	697 aa	Known RBP	13.67	□□□□□ -0.22
SCC4	YER147C	NGR1	P32831	672 aa	Known RBP	13.66	□□□□□ -0.22
SCC4	YER147C	MFT1	P33441	392 aa	Known RBP	13.65	□□□□□ -0.22
SCC4	YER147C	EST2	Q06163	884 aa		13.65	□□□□□ -0.22
SCC4	YER147C	HSP82	P02829	709 aa	Known RBP	13.65	□□□□□ -0.22
SCC4	YER147C	MPH3	P0CE00	602 aa		13.65	□□□□□ -0.22
SCC4	YER147C	DIT2	P21595	489 aa		13.65	□□□□□ -0.22
SCC4	YER147C	YKT6	P36015	200 aa	Known RBP	13.65	□□□□□ -0.22
SCC4	YER147C	FYV10	P40492	516 aa		13.65	□□□□□ -0.22
SCC4	YER147C	IRC8	P47046	822 aa		13.65	□□□□□ -0.22
SCC4	YER147C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	13.64	□□□□□ -0.23	not detected
SCC4	YER147C	RER2	P35196	286 aa		13.64	□□□□□ -0.23
SCC4	YER147C	SRC1	Q03707	834 aa		13.64	□□□□□ -0.23
SCC4	YER147C	PPM2	Q08282	695 aa		13.64	□□□□□ -0.23
SCC4	YER147C	GSY2	P27472	705 aa		13.63	□□□□□ -0.23
SCC4	YER147C	MNR2	P35724	969 aa		13.63	□□□□□ -0.23
SCC4	YER147C	CBP3	P21560	335 aa		13.63	□□□□□ -0.23
SCC4	YER147C	SRP40	P32583	406 aa	Predicted RBP	13.63	□□□□□ -0.23
SCC4	YER147C	THI3	Q07471	609 aa		13.63	□□□□□ -0.23
SCC4	YER147C	RPN1	P38764	993 aa	Known RBP	13.62	□□□□□ -0.23
SCC4	YER147C	TFG2	P41896	400 aa	Predicted RBP	13.62	□□□□□ -0.23
SCC4	YER147C	YJL181W	P46987	611 aa		13.62	□□□□□ -0.23
SCC4	YER147C	ISW2	Q08773	1120 aa		13.62	□□□□□ -0.23
SCC4	YER147C	RAT1	Q02792	1006 aa	Known RBP	13.61	□□□□□ -0.23

Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms