RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C AI3P03877 415 aa6.29□□□□□ -1.4
RTR1YER139C INP52P50942 1183 aa6.29□□□□□ -1.4
RTR1YER139C GAS5Q08193 484 aa6.29□□□□□ -1.4
RTR1YER139C ACS2P52910 683 aaKnown RBP6.28□□□□□ -1.4
RTR1YER139C UBP1P25037 809 aa6.27□□□□□ -1.41
RTR1YER139C SCD5P34758 872 aa6.27□□□□□ -1.41
RTR1YER139C PGM1P33401 570 aaKnown RBP6.26□□□□□ -1.41
RTR1YER139C HXT5P38695 592 aa6.26□□□□□ -1.41
RTR1YER139C KTR7P40504 517 aa6.26□□□□□ -1.41
RTR1YER139C PHO87P25360 923 aa6.25□□□□□ -1.41
RTR1YER139C KAP122P32767 1081 aa6.25□□□□□ -1.41
RTR1YER139C APM2P38700 605 aa6.25□□□□□ -1.41
RTR1YER139C RRM3P38766 723 aa6.25□□□□□ -1.41
RTR1YER139C RPL34BP40525 121 aaKnown RBP6.25□□□□□ -1.41
RTR1YER139C YNR040WP53736 256 aa6.25□□□□□ -1.41
RTR1YER139C SAC7P17121 654 aa6.24□□□□□ -1.41
RTR1YER139C RPC31P17890 251 aa6.24□□□□□ -1.41
RTR1YER139C GAS4Q08271 471 aa6.23□□□□□ -1.41
RTR1YER139C MRP10O75012 95 aa6.22□□□□□ -1.41
RTR1YER139C HAP4P14064 554 aa6.22□□□□□ -1.41
RTR1YER139C ARI1P53111 347 aaKnown RBP6.22□□□□□ -1.41
RTR1YER139C IDI1P15496 288 aa6.21□□□□□ -1.42
RTR1YER139C NAB2P32505 525 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
RTR1YER139C NGR1P32831 672 aaKnown RBP6.21□□□□□ -1.42
RTR1YER139C QDR2P40474 542 aa6.2□□□□□ -1.42
RTR1YER139C IRC24P40580 263 aa6.2□□□□□ -1.42
RTR1YER139C SFA1P32771 386 aa6.19□□□□□ -1.42
RTR1YER139C ROM1P53046 1155 aa6.18□□□□□ -1.42
RTR1YER139C COQ2P32378 372 aa6.17□□□□□ -1.42
RTR1YER139C YKR073CP36153 106 aa6.17□□□□□ -1.42
RTR1YER139C ITC1P53125 1264 aa6.17□□□□□ -1.42
RTR1YER139C SLP1Q12232 587 aa6.16□□□□□ -1.42
RTR1YER139C TRP3P00937 484 aa6.15□□□□□ -1.42
RTR1YER139C YER156CP40093 338 aaKnown RBP6.15□□□□□ -1.42
RTR1YER139C YLR122CQ12312 125 aa6.15□□□□□ -1.42
RTR1YER139C KAE1P36132 386 aa6.14□□□□□ -1.43
RTR1YER139C AVT1P47082 602 aa6.14□□□□□ -1.43
RTR1YER139C CAB1Q04430 367 aa6.14□□□□□ -1.43
RTR1YER139C MED7Q08278 222 aa6.14□□□□□ -1.43
RTR1YER139C GAL2P13181 574 aa6.13□□□□□ -1.43
RTR1YER139C TED1P40533 473 aa6.13□□□□□ -1.43
RTR1YER139C HGH1P48362 394 aaKnown RBP6.13□□□□□ -1.43
RTR1YER139C SIS2P36024 562 aa6.12□□□□□ -1.43
RTR1YER139C VAN1P23642 535 aa6.11□□□□□ -1.43
RTR1YER139C RSC6P25632 483 aa6.11□□□□□ -1.43
RTR1YER139C YOR296WQ08748 1289 aa6.11□□□□□ -1.43
RTR1YER139C TY1A-NL1Q12391 440 aaKnown RBP6.11□□□□□ -1.43
RTR1YER139C TY4B-PA0A0B7P3V8 1104 aa6.1□□□□□ -1.43
RTR1YER139C LIP5P32875 414 aa6.1□□□□□ -1.43
RTR1YER139C TOS1P38288 455 aa6.1□□□□□ -1.43
RTR1YER139C BSD2P38356 321 aa6.1□□□□□ -1.43
RTR1YER139C TY4A-HQ6Q5P6 413 aa6.1□□□□□ -1.43
RTR1YER139C SUV3P32580 737 aa6.09□□□□□ -1.43
RTR1YER139C GIP2P40036 548 aa6.09□□□□□ -1.43
RTR1YER139C CWH41P53008 833 aa6.09□□□□□ -1.43
RTR1YER139C FOX2Q02207 900 aaKnown RBP6.09□□□□□ -1.43
RTR1YER139C MRPL33P20084 86 aa6.08□□□□□ -1.44
RTR1YER139C VMA3P25515 160 aa6.08□□□□□ -1.44
RTR1YER139C SAF1P38352 637 aa6.08□□□□□ -1.44
RTR1YER139C DYS1P38791 387 aa6.08□□□□□ -1.44
RTR1YER139C SOK2P53438 785 aaPredicted RBP6.08□□□□□ -1.44
RTR1YER139C TRS33Q99394 268 aa6.08□□□□□ -1.44
RTR1YER139C AKR1P39010 764 aa6.07□□□□□ -1.44
RTR1YER139C CTH1P47976 325 aa6.07□□□□□ -1.44
RTR1YER139C YGR130CP53278 816 aa6.07□□□□□ -1.44
RTR1YER139C GIP1P38229 639 aa6.06□□□□□ -1.44
RTR1YER139C CHS2P14180 963 aa6.05□□□□□ -1.44
RTR1YER139C PUB1P32588 453 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44 RIP-Chip
RTR1YER139C TGL4P36165 910 aa6.05□□□□□ -1.44
RTR1YER139C YJL181WP46987 611 aa6.05□□□□□ -1.44
RTR1YER139C NAM7P30771 971 aaKnown RBP6.04□□□□□ -1.44
RTR1YER139C PPT1P53043 513 aa6.04□□□□□ -1.44
RTR1YER139C ECM23Q02710 187 aa6.04□□□□□ -1.44
RTR1YER139C RSC2Q06488 889 aa6.04□□□□□ -1.44
RTR1YER139C BRE4Q07660 1125 aa6.04□□□□□ -1.44
RTR1YER139C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
RTR1YER139C DSE4P53753 1117 aa6.03□□□□□ -1.44
RTR1YER139C AOS1Q06624 347 aa6.03□□□□□ -1.44
RTR1YER139C REC8Q12188 680 aa6.03□□□□□ -1.44
RTR1YER139C LDH1P38139 375 aa6.02□□□□□ -1.45
RTR1YER139C ISW1P38144 1129 aa6.02□□□□□ -1.45
RTR1YER139C YBR197CP38306 217 aa6.01□□□□□ -1.45
RTR1YER139C MAG2Q06436 670 aaKnown RBP6.01□□□□□ -1.45
RTR1YER139C ELM1P32801 640 aa6□□□□□ -1.45
RTR1YER139C UBX7P38349 436 aa6□□□□□ -1.45
RTR1YER139C YIL165CP40446 119 aa6□□□□□ -1.45
RTR1YER139C CYC7P00045 113 aa5.99□□□□□ -1.45
RTR1YER139C PAN5P38787 379 aa5.99□□□□□ -1.45
RTR1YER139C MSN1P22148 382 aa5.98□□□□□ -1.45
RTR1YER139C ISC10P32645 267 aa5.98□□□□□ -1.45
RTR1YER139C TTI1P36097 1038 aa5.98□□□□□ -1.45
RTR1YER139C SPO74P45819 413 aa5.98□□□□□ -1.45
RTR1YER139C ALD4P46367 519 aaKnown RBP5.98□□□□□ -1.45
RTR1YER139C INP51P40559 946 aaKnown RBP5.97□□□□□ -1.45
RTR1YER139C TFA2P36145 328 aa5.95□□□□□ -1.46
RTR1YER139C SEA4P38164 1038 aa5.94□□□□□ -1.46
RTR1YER139C BIO5P53744 561 aaKnown RBP5.94□□□□□ -1.46
RTR1YER139C ALD3P54114 506 aa5.94□□□□□ -1.46
RTR1YER139C EMG1Q06287 252 aaKnown RBP5.94□□□□□ -1.46
RTR1YER139C GUP1P53154 560 aa5.93□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms