RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C YGL140CP53120 1219 aa5.12□□□□□ -1.59
PRP28YDR243C TPO2P53283 614 aa5.12□□□□□ -1.59
PRP28YDR243C TRM1P15565 570 aaKnown RBP5.11□□□□□ -1.59
PRP28YDR243C RPL5P26321 297 aaKnown RBP5.11□□□□□ -1.59
PRP28YDR243C RAD16P31244 790 aa5.11□□□□□ -1.59
PRP28YDR243C RSC30P38781 883 aa5.11□□□□□ -1.59
PRP28YDR243C JJJ1P53863 590 aa5.11□□□□□ -1.59
PRP28YDR243C YDR341CQ05506 607 aaKnown RBP5.11□□□□□ -1.59
PRP28YDR243C PSR1Q07800 427 aa5.11□□□□□ -1.59
PRP28YDR243C BRF1P29056 596 aa5.11□□□□□ -1.59
PRP28YDR243C ASF1P32447 279 aa5.11□□□□□ -1.59
PRP28YDR243C GCD6P32501 712 aaKnown RBP5.11□□□□□ -1.59
PRP28YDR243C MRS2Q01926 470 aa5.11□□□□□ -1.59
PRP28YDR243C LCD1Q04377 747 aa5.11□□□□□ -1.59
PRP28YDR243C SML1Q04964 104 aa5.11□□□□□ -1.59
PRP28YDR243C PEX19Q07418 342 aa5.11□□□□□ -1.59
PRP28YDR243C SEC20P28791 383 aa5.1□□□□□ -1.59
PRP28YDR243C RIO2P40160 425 aaKnown RBP5.1□□□□□ -1.59
PRP28YDR243C PKH3Q03306 898 aaPredicted RBP5.1□□□□□ -1.59
PRP28YDR243C YDR444WQ04093 687 aa5.1□□□□□ -1.59
PRP28YDR243C RRB1Q04225 511 aaKnown RBP5.1□□□□□ -1.59
PRP28YDR243C SWI6P09959 803 aa5.09□□□□□ -1.59
PRP28YDR243C THR4P16120 514 aaKnown RBP5.09□□□□□ -1.59
PRP28YDR243C OLA1P38219 394 aaKnown RBP5.09□□□□□ -1.59
PRP28YDR243C RTT107P38850 1070 aa5.09□□□□□ -1.59
PRP28YDR243C SIT1P39980 628 aa5.09□□□□□ -1.59
PRP28YDR243C DNM1P54861 757 aa5.09□□□□□ -1.59
PRP28YDR243C YDL206WQ12424 762 aa5.09□□□□□ -1.59
PRP28YDR243C TY1B-DR4Q07793 1604 aa5.09□□□□□ -1.59
PRP28YDR243C PDC1P06169 563 aaKnown RBP5.09□□□□□ -1.6
PRP28YDR243C DPH5P32469 300 aaPredicted RBP5.09□□□□□ -1.6
PRP28YDR243C APL6P46682 809 aa5.09□□□□□ -1.6
PRP28YDR243C CCM1P48237 864 aaPredicted RBP5.09□□□□□ -1.6
PRP28YDR243C RPA14P50106 137 aa5.09□□□□□ -1.6
PRP28YDR243C KXD1P53158 218 aa5.09□□□□□ -1.6
PRP28YDR243C NOP7P53261 605 aaKnown RBP5.09□□□□□ -1.6
PRP28YDR243C YPR097WQ06839 1073 aa5.09□□□□□ -1.6
PRP28YDR243C CLF1Q12309 687 aaPredicted RBP5.09□□□□□ -1.6
PRP28YDR243C TPD3P31383 635 aa5.08□□□□□ -1.6
PRP28YDR243C MPH1P40562 993 aa5.08□□□□□ -1.6
PRP28YDR243C TBF1Q02457 562 aa5.08□□□□□ -1.6
PRP28YDR243C MCM2P29469 868 aa5.07□□□□□ -1.6
PRP28YDR243C NUF2P33895 451 aa5.07□□□□□ -1.6
PRP28YDR243C LAM1P38851 1228 aa5.07□□□□□ -1.6
PRP28YDR243C HXT10P43581 546 aa5.07□□□□□ -1.6
PRP28YDR243C ATG36P46983 293 aa5.07□□□□□ -1.6
PRP28YDR243C HPC2Q01448 625 aa5.07□□□□□ -1.6
PRP28YDR243C SYH1Q02875 849 aaKnown RBP5.07□□□□□ -1.6
PRP28YDR243C RAD59Q12223 238 aa5.07□□□□□ -1.6
PRP28YDR243C SFI1Q12369 946 aa5.07□□□□□ -1.6
PRP28YDR243C LSO1Q3E827 93 aa5.07□□□□□ -1.6
PRP28YDR243C RAD50P12753 1312 aa5.07□□□□□ -1.6
PRP28YDR243C PDI1P17967 522 aaKnown RBP5.06□□□□□ -1.6
PRP28YDR243C ARG8P18544 423 aa5.06□□□□□ -1.6
PRP28YDR243C SEC14P24280 304 aaKnown RBP5.06□□□□□ -1.6
PRP28YDR243C MSH1P25846 959 aa5.06□□□□□ -1.6
PRP28YDR243C EFB1P32471 206 aaKnown RBP5.06□□□□□ -1.6
PRP28YDR243C EXO84P38261 753 aa5.06□□□□□ -1.6
PRP28YDR243C TOM71P38825 639 aaKnown RBP5.06□□□□□ -1.6
PRP28YDR243C BEM4P39011 633 aa5.06□□□□□ -1.6
PRP28YDR243C HUL5P53119 910 aa5.06□□□□□ -1.6
PRP28YDR243C PKH1Q03407 766 aa5.06□□□□□ -1.6
PRP28YDR243C LCB5Q06147 687 aaKnown RBP5.06□□□□□ -1.6
PRP28YDR243C ALR1Q08269 859 aa5.06□□□□□ -1.6
PRP28YDR243C GEA1P47102 1408 aaPredicted RBP5.06□□□□□ -1.6
PRP28YDR243C AFT1P22149 690 aa5.06□□□□□ -1.6
PRP28YDR243C RKM3P38222 552 aa5.06□□□□□ -1.6
PRP28YDR243C RPT2P40327 437 aaKnown RBP5.06□□□□□ -1.6
PRP28YDR243C SEC27P41811 889 aaKnown RBP5.06□□□□□ -1.6
PRP28YDR243C MET32Q12041 191 aa5.06□□□□□ -1.6
PRP28YDR243C SIN3P22579 1536 aa5.05□□□□□ -1.6
PRP28YDR243C DNA2P38859 1522 aa5.05□□□□□ -1.6
PRP28YDR243C ASH1P34233 588 aa5.05□□□□□ -1.6
PRP28YDR243C SAP1P39955 897 aaKnown RBP5.05□□□□□ -1.6
PRP28YDR243C RRD1P40454 393 aaKnown RBP5.05□□□□□ -1.6
PRP28YDR243C CEP3P40969 608 aa5.05□□□□□ -1.6
PRP28YDR243C STU2P46675 888 aa5.05□□□□□ -1.6
PRP28YDR243C ATG26Q06321 1198 aa5.05□□□□□ -1.6
PRP28YDR243C YDL176WQ12027 708 aa5.05□□□□□ -1.6
PRP28YDR243C MHP1P43638 1398 aa5.05□□□□□ -1.6
PRP28YDR243C NUP145P49687 1317 aa5.05□□□□□ -1.6
PRP28YDR243C TSC11P40061 1430 aa5.05□□□□□ -1.6
PRP28YDR243C ELM1P32801 640 aa5.04□□□□□ -1.6
PRP28YDR243C SEC26P41810 973 aaKnown RBP5.04□□□□□ -1.6
PRP28YDR243C OSW7P43611 510 aa5.04□□□□□ -1.6
PRP28YDR243C INP52P50942 1183 aa5.04□□□□□ -1.6
PRP28YDR243C ARO80Q04052 950 aa5.04□□□□□ -1.6
PRP28YDR243C UBX2Q04228 584 aa5.04□□□□□ -1.6
PRP28YDR243C PUS5Q06244 254 aa5.04□□□□□ -1.6
PRP28YDR243C YPR172WQ06608 200 aa5.04□□□□□ -1.6
PRP28YDR243C CDC45Q08032 650 aa5.04□□□□□ -1.6
PRP28YDR243C RVB2Q12464 471 aaKnown RBP5.04□□□□□ -1.6
PRP28YDR243C NKP1Q12493 238 aa5.04□□□□□ -1.6
PRP28YDR243C TIF3P34167 436 aaKnown RBP5.04□□□□□ -1.6
PRP28YDR243C VPS41P38959 992 aa5.04□□□□□ -1.6
PRP28YDR243C YRB1P41920 201 aaKnown RBP5.04□□□□□ -1.6
PRP28YDR243C TAF1P46677 1066 aa5.04□□□□□ -1.6
PRP28YDR243C SHE4P51534 789 aa5.04□□□□□ -1.6
PRP28YDR243C YNL247WP53852 767 aaKnown RBP5.04□□□□□ -1.6
PRP28YDR243C ADE12P80210 433 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms