RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	KTR2	P33550	425 aa		6.7	□□□□□ -1.34
LCB2	YDR062W	BUD21	Q08492	214 aa	Predicted RBP	6.7	□□□□□ -1.34
LCB2	YDR062W	MSH4	P40965	878 aa	Predicted RBP	6.69	□□□□□ -1.34
LCB2	YDR062W	GDE1	Q02979	1223 aa		6.69	□□□□□ -1.34
LCB2	YDR062W	TOS4	Q06266	489 aa		6.69	□□□□□ -1.34
LCB2	YDR062W	YOL057W	Q08225	711 aa		6.69	□□□□□ -1.34
LCB2	YDR062W	PPM2	Q08282	695 aa		6.69	□□□□□ -1.34
LCB2	YDR062W	HXK1	P04806	485 aa	Known RBP	6.68	□□□□□ -1.34
LCB2	YDR062W	RAD4	P14736	754 aa		6.68	□□□□□ -1.34
LCB2	YDR062W	FAA3	P39002	694 aa		6.68	□□□□□ -1.34
LCB2	YDR062W	NOP2	P40991	618 aa	Known RBP	6.68	□□□□□ -1.34
LCB2	YDR062W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	6.68	□□□□□ -1.34	not detected
LCB2	YDR062W	NOC3	Q07896	663 aa	Predicted RBP	6.68	□□□□□ -1.34
LCB2	YDR062W	RRD1	P40454	393 aa	Known RBP	6.68	□□□□□ -1.34
LCB2	YDR062W	VNX1	P42839	908 aa		6.68	□□□□□ -1.34
LCB2	YDR062W	TPD3	P31383	635 aa		6.67	□□□□□ -1.34
LCB2	YDR062W	TIM54	P47045	478 aa		6.67	□□□□□ -1.34
LCB2	YDR062W	FAA4	P47912	694 aa	Known RBP	6.67	□□□□□ -1.34
LCB2	YDR062W	NAN1	Q02931	896 aa	Known RBP	6.67	□□□□□ -1.34
LCB2	YDR062W	BUD20	Q08004	166 aa	Predicted RBP	6.67	□□□□□ -1.34
LCB2	YDR062W	PHO8	P11491	566 aa		6.66	□□□□□ -1.34
LCB2	YDR062W	TIM23	P32897	222 aa		6.66	□□□□□ -1.34
LCB2	YDR062W	YHL008C	P38750	627 aa		6.66	□□□□□ -1.34
LCB2	YDR062W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	6.66	□□□□□ -1.34	not detected
LCB2	YDR062W	UBP12	P39538	1254 aa		6.66	□□□□□ -1.34
LCB2	YDR062W	RRN7	P40992	514 aa		6.66	□□□□□ -1.34
LCB2	YDR062W	BSC2	Q05611	235 aa		6.66	□□□□□ -1.34
LCB2	YDR062W	TDA5	Q06417	326 aa	Known RBP	6.66	□□□□□ -1.34
LCB2	YDR062W	UTR2	P32623	467 aa		6.65	□□□□□ -1.34
LCB2	YDR062W	SMC1	P32908	1225 aa		6.65	□□□□□ -1.34
LCB2	YDR062W	ULI1	P43604	169 aa		6.65	□□□□□ -1.34
LCB2	YDR062W	TPO2	P53283	614 aa		6.65	□□□□□ -1.34
LCB2	YDR062W	YNL035C	P53962	389 aa	Known RBP	6.65	□□□□□ -1.34
LCB2	YDR062W	SGS1	P35187	1447 aa		6.65	□□□□□ -1.35
LCB2	YDR062W	CDC34	P14682	295 aa		6.65	□□□□□ -1.35
LCB2	YDR062W	MRPL33	P20084	86 aa		6.65	□□□□□ -1.35
LCB2	YDR062W	PRI2	P20457	528 aa		6.65	□□□□□ -1.35
LCB2	YDR062W	PAT1	P25644	796 aa	Known RBP	6.65	□□□□□ -1.35
LCB2	YDR062W	MRPS18	P42847	217 aa		6.65	□□□□□ -1.35
LCB2	YDR062W	RSC4	Q02206	625 aa		6.65	□□□□□ -1.35
LCB2	YDR062W	ELP4	Q02884	456 aa	Known RBP	6.65	□□□□□ -1.35
LCB2	YDR062W	YLR125W	Q12138	136 aa		6.65	□□□□□ -1.35
LCB2	YDR062W	HXT5	P38695	592 aa		6.64	□□□□□ -1.35
LCB2	YDR062W	PMC1	P38929	1173 aa	Predicted RBP	6.64	□□□□□ -1.35
LCB2	YDR062W	SPF1	P39986	1215 aa	Known RBP	6.64	□□□□□ -1.35
LCB2	YDR062W	CHZ1	P40019	153 aa	Predicted RBP	6.64	□□□□□ -1.35
LCB2	YDR062W	YEN1	P40028	759 aa		6.64	□□□□□ -1.35
LCB2	YDR062W	HAP5	Q02516	242 aa		6.64	□□□□□ -1.35
LCB2	YDR062W	OPI10	Q08202	246 aa		6.64	□□□□□ -1.35
LCB2	YDR062W	MCD1	Q12158	566 aa		6.64	□□□□□ -1.35
LCB2	YDR062W	PRE9	P23638	258 aa	Known RBP	6.63	□□□□□ -1.35
LCB2	YDR062W	SPP1	Q03012	353 aa		6.62	□□□□□ -1.35
LCB2	YDR062W	DAL4	Q04895	635 aa		6.62	□□□□□ -1.35
LCB2	YDR062W	GRX7	P38068	203 aa		6.61	□□□□□ -1.35
LCB2	YDR062W	YHR020W	P38708	688 aa	Known RBP	6.61	□□□□□ -1.35
LCB2	YDR062W	HXT8	P40886	569 aa		6.61	□□□□□ -1.35
LCB2	YDR062W	YGR053C	P53234	283 aa		6.61	□□□□□ -1.35
LCB2	YDR062W	PRT1	P06103	763 aa	Known RBP	6.61	□□□□□ -1.35
LCB2	YDR062W	THI4	P32318	326 aa		6.61	□□□□□ -1.35
LCB2	YDR062W	TYW3	P53177	273 aa		6.61	□□□□□ -1.35
LCB2	YDR062W	ISU1	Q03020	165 aa		6.61	□□□□□ -1.35
LCB2	YDR062W	SRM1	P21827	482 aa		6.6	□□□□□ -1.35
LCB2	YDR062W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	6.6	□□□□□ -1.35	not detected
LCB2	YDR062W	KIP2	P28743	706 aa		6.6	□□□□□ -1.35
LCB2	YDR062W	SCD5	P34758	872 aa		6.6	□□□□□ -1.35
LCB2	YDR062W	TBS1	P38114	1094 aa		6.6	□□□□□ -1.35
LCB2	YDR062W	CRP1	P38845	465 aa	Known RBP	6.6	□□□□□ -1.35
LCB2	YDR062W	TIF11	P38912	153 aa	Known RBP	6.6	□□□□□ -1.35
LCB2	YDR062W	INP54	Q08227	384 aa	Known RBP	6.6	□□□□□ -1.35
LCB2	YDR062W	DUT1	P33317	147 aa		6.59	□□□□□ -1.35
LCB2	YDR062W	YKL069W	P36088	180 aa		6.59	□□□□□ -1.35
LCB2	YDR062W	EMW1	P42842	904 aa	Known RBP	6.59	□□□□□ -1.35
LCB2	YDR062W	FLC1	Q08967	793 aa		6.59	□□□□□ -1.35
LCB2	YDR062W	MCM1	P11746	286 aa		6.58	□□□□□ -1.36
LCB2	YDR062W	DAT1	P13483	248 aa	Known RBP	6.58	□□□□□ -1.36
LCB2	YDR062W	PRP40	P33203	583 aa	Known RBP	6.58	□□□□□ -1.36
LCB2	YDR062W	RAD55	P38953	406 aa		6.58	□□□□□ -1.36
LCB2	YDR062W	APP1	P53933	587 aa		6.58	□□□□□ -1.36
LCB2	YDR062W	YCS4	Q06156	1176 aa		6.58	□□□□□ -1.36
LCB2	YDR062W	IOC2	Q12072	812 aa		6.58	□□□□□ -1.36
LCB2	YDR062W	NOP14	Q99207	810 aa	Known RBP	6.58	□□□□□ -1.36
LCB2	YDR062W	CCP1	P00431	361 aa		6.58	□□□□□ -1.36
LCB2	YDR062W	MOD5	P07884	428 aa		6.58	□□□□□ -1.36
LCB2	YDR062W	VMA3	P25515	160 aa		6.58	□□□□□ -1.36
LCB2	YDR062W	FBP26	P32604	452 aa		6.58	□□□□□ -1.36
LCB2	YDR062W	ENP1	P38333	483 aa	Known RBP	6.58	□□□□□ -1.36
LCB2	YDR062W	DNM1	P54861	757 aa		6.58	□□□□□ -1.36
LCB2	YDR062W	FAL1	Q12099	399 aa	Known RBP	6.58	□□□□□ -1.36
LCB2	YDR062W	GIN4	Q12263	1142 aa		6.58	□□□□□ -1.36
LCB2	YDR062W	SPT16	P32558	1035 aa	Known RBP	6.57	□□□□□ -1.36
LCB2	YDR062W	SEC61	P32915	480 aa		6.57	□□□□□ -1.36
LCB2	YDR062W	RSP5	P39940	809 aa	Known RBP	6.57	□□□□□ -1.36
LCB2	YDR062W	YJR115W	P47152	169 aa		6.57	□□□□□ -1.36
LCB2	YDR062W	YPQ2	Q06328	317 aa		6.57	□□□□□ -1.36
LCB2	YDR062W	KAR2	P16474	682 aa	Known RBP	6.56	□□□□□ -1.36
LCB2	YDR062W	ARH1	P48360	493 aa		6.56	□□□□□ -1.36
LCB2	YDR062W	BNI4	P53858	892 aa		6.56	□□□□□ -1.36
LCB2	YDR062W	YPL109C	Q02981	657 aa		6.56	□□□□□ -1.36
LCB2	YDR062W	HSL1	P34244	1518 aa		6.56	□□□□□ -1.36
LCB2	YDR062W	ERR1	P0CX10	437 aa		6.55	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms