RNA–Protein interactions for RNA: YDL213C

NOP6, Transcript of rRNA-binding protein required for 40S ribosomal subunit biogenesis, yeast

Gene NOP6, Length 678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP6	YDL213C	YJR142W	P47173	342 aa		4.92	□□□□□ -1.62
NOP6	YDL213C	SCW11	P53189	542 aa		4.92	□□□□□ -1.62
NOP6	YDL213C	TMA64	Q04600	565 aa	Known RBP	4.92	□□□□□ -1.62
NOP6	YDL213C	BDF2	Q07442	638 aa		4.92	□□□□□ -1.62
NOP6	YDL213C	BRE1	Q07457	700 aa	Known RBP	4.92	□□□□□ -1.62
NOP6	YDL213C	CDC53	Q12018	815 aa	Known RBP	4.92	□□□□□ -1.62
NOP6	YDL213C	TY1A-BL	Q12266	440 aa		4.92	□□□□□ -1.62
NOP6	YDL213C	SPT2	P06843	333 aa	Predicted RBP	4.91	□□□□□ -1.62
NOP6	YDL213C	HAP4	P14064	554 aa		4.91	□□□□□ -1.62
NOP6	YDL213C	MIP1	P15801	1254 aa		4.91	□□□□□ -1.62
NOP6	YDL213C	GAL11	P19659	1081 aa		4.91	□□□□□ -1.62
NOP6	YDL213C	IXR1	P33417	597 aa		4.91	□□□□□ -1.62
NOP6	YDL213C	ENP1	P38333	483 aa	Known RBP	4.91	□□□□□ -1.62
NOP6	YDL213C	UBP12	P39538	1254 aa		4.91	□□□□□ -1.62
NOP6	YDL213C	BOI2	P39969	1040 aa		4.91	□□□□□ -1.62
NOP6	YDL213C	RPA14	P50106	137 aa		4.91	□□□□□ -1.62
NOP6	YDL213C	CEF1	Q03654	590 aa	Predicted RBP	4.91	□□□□□ -1.62
NOP6	YDL213C	ESF1	Q06344	628 aa	Known RBP	4.91	□□□□□ -1.62
NOP6	YDL213C	YPR097W	Q06839	1073 aa		4.91	□□□□□ -1.62
NOP6	YDL213C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
NOP6	YDL213C	GRX7	P38068	203 aa		4.9	□□□□□ -1.63
NOP6	YDL213C	RTT106	P40161	455 aa		4.9	□□□□□ -1.63
NOP6	YDL213C	EMP47	P43555	445 aa		4.9	□□□□□ -1.63
NOP6	YDL213C	KIP3	P53086	805 aa	Known RBP	4.9	□□□□□ -1.63
NOP6	YDL213C	PUS6	P53294	404 aa		4.9	□□□□□ -1.63
NOP6	YDL213C	ALR1	Q08269	859 aa		4.9	□□□□□ -1.63
NOP6	YDL213C	MET6	P05694	767 aa	Known RBP	4.89	□□□□□ -1.63
NOP6	YDL213C	KAR1	P11927	433 aa		4.89	□□□□□ -1.63
NOP6	YDL213C	MCM2	P29469	868 aa		4.89	□□□□□ -1.63
NOP6	YDL213C	MSH4	P40965	878 aa	Predicted RBP	4.89	□□□□□ -1.63
NOP6	YDL213C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
NOP6	YDL213C	PUN1	Q06991	263 aa		4.89	□□□□□ -1.63
NOP6	YDL213C	YDL206W	Q12424	762 aa		4.89	□□□□□ -1.63
NOP6	YDL213C	PWP2	P25635	923 aa	Known RBP	4.88	□□□□□ -1.63
NOP6	YDL213C	SEC6	P32844	805 aa		4.88	□□□□□ -1.63
NOP6	YDL213C	MNR2	P35724	969 aa		4.88	□□□□□ -1.63
NOP6	YDL213C	VPS24	P36095	224 aa	Known RBP	4.88	□□□□□ -1.63
NOP6	YDL213C	ERP2	P39704	215 aa		4.88	□□□□□ -1.63
NOP6	YDL213C	ATG3	P40344	310 aa		4.88	□□□□□ -1.63
NOP6	YDL213C	ROM1	P53046	1155 aa		4.88	□□□□□ -1.63
NOP6	YDL213C	ECM16	Q04217	1267 aa	Known RBP	4.88	□□□□□ -1.63
NOP6	YDL213C	SPR28	Q04921	423 aa		4.88	□□□□□ -1.63
NOP6	YDL213C	GAS4	Q08271	471 aa		4.88	□□□□□ -1.63
NOP6	YDL213C	NKP1	Q12493	238 aa		4.88	□□□□□ -1.63
NOP6	YDL213C	PHO4	P07270	312 aa	Known RBP	4.87	□□□□□ -1.63
NOP6	YDL213C	MRC1	P25588	1096 aa		4.87	□□□□□ -1.63
NOP6	YDL213C	KRI1	P42846	591 aa	Known RBP	4.87	□□□□□ -1.63
NOP6	YDL213C	ACS2	P52910	683 aa	Known RBP	4.87	□□□□□ -1.63
NOP6	YDL213C	DNM1	P54861	757 aa		4.87	□□□□□ -1.63
NOP6	YDL213C	GIR2	Q03768	265 aa	Predicted RBP	4.87	□□□□□ -1.63
NOP6	YDL213C	LSO1	Q3E827	93 aa		4.87	□□□□□ -1.63
NOP6	YDL213C	RAD2	P07276	1031 aa		4.86	□□□□□ -1.63
NOP6	YDL213C	TRM1	P15565	570 aa	Known RBP	4.86	□□□□□ -1.63
NOP6	YDL213C	RPA135	P22138	1203 aa	Known RBP	4.86	□□□□□ -1.63
NOP6	YDL213C	DPB3	P27344	201 aa		4.86	□□□□□ -1.63
NOP6	YDL213C	ISF1	P32488	338 aa		4.86	□□□□□ -1.63
NOP6	YDL213C	RPT1	P33299	467 aa	Known RBP	4.86	□□□□□ -1.63
NOP6	YDL213C	YEN1	P40028	759 aa		4.86	□□□□□ -1.63
NOP6	YDL213C	ICP55	P40051	511 aa		4.86	□□□□□ -1.63
NOP6	YDL213C	NUP82	P40368	713 aa		4.86	□□□□□ -1.63
NOP6	YDL213C	SPR3	P41901	512 aa		4.86	□□□□□ -1.63
NOP6	YDL213C	ITC1	P53125	1264 aa		4.86	□□□□□ -1.63
NOP6	YDL213C	TRS120	Q04183	1289 aa		4.86	□□□□□ -1.63
NOP6	YDL213C	UTP13	Q05946	817 aa	Known RBP	4.86	□□□□□ -1.63
NOP6	YDL213C	PPM2	Q08282	695 aa		4.86	□□□□□ -1.63
NOP6	YDL213C	TOA1	P32773	286 aa		4.85	□□□□□ -1.63
NOP6	YDL213C	MFT1	P33441	392 aa	Known RBP	4.85	□□□□□ -1.63
NOP6	YDL213C	PAF1	P38351	445 aa		4.85	□□□□□ -1.63
NOP6	YDL213C	TAT2	P38967	592 aa		4.85	□□□□□ -1.63
NOP6	YDL213C	VPS27	P40343	622 aa	Known RBP	4.85	□□□□□ -1.63
NOP6	YDL213C	LSC2	P53312	427 aa		4.85	□□□□□ -1.63
NOP6	YDL213C	TBF1	Q02457	562 aa		4.85	□□□□□ -1.63
NOP6	YDL213C	VAN1	P23642	535 aa		4.84	□□□□□ -1.63
NOP6	YDL213C	GCD6	P32501	712 aa	Known RBP	4.84	□□□□□ -1.63
NOP6	YDL213C	PEP7	P32609	515 aa		4.84	□□□□□ -1.63
NOP6	YDL213C	PET112	P33893	541 aa		4.84	□□□□□ -1.63
NOP6	YDL213C	BOI1	P38041	980 aa	Known RBP	4.84	□□□□□ -1.63
NOP6	YDL213C	FUI1	P38196	639 aa		4.84	□□□□□ -1.63
NOP6	YDL213C	NOC2	P39744	710 aa	Known RBP	4.84	□□□□□ -1.63
NOP6	YDL213C	RPT2	P40327	437 aa	Known RBP	4.84	□□□□□ -1.63
NOP6	YDL213C	AIM21	P40563	679 aa		4.84	□□□□□ -1.63
NOP6	YDL213C	HUL5	P53119	910 aa		4.84	□□□□□ -1.63
NOP6	YDL213C	UBP2	Q01476	1272 aa		4.84	□□□□□ -1.63
NOP6	YDL213C	VMS1	Q04311	632 aa	Known RBP	4.84	□□□□□ -1.63
NOP6	YDL213C	GPI13	Q07830	1017 aa		4.84	□□□□□ -1.63
NOP6	YDL213C	TRS33	Q99394	268 aa		4.84	□□□□□ -1.63
NOP6	YDL213C	THS1	P04801	734 aa	Known RBP	4.83	□□□□□ -1.64
NOP6	YDL213C	ARG82	P07250	355 aa		4.83	□□□□□ -1.64
NOP6	YDL213C	PHO8	P11491	566 aa		4.83	□□□□□ -1.64
NOP6	YDL213C	MPE1	P35728	441 aa	Known RBP	4.83	□□□□□ -1.64
NOP6	YDL213C	CRP1	P38845	465 aa	Known RBP	4.83	□□□□□ -1.64
NOP6	YDL213C	POL5	P39985	1022 aa	Known RBP	4.83	□□□□□ -1.64
NOP6	YDL213C	AAD14	P42884	376 aa		4.83	□□□□□ -1.64
NOP6	YDL213C	DAK2	P43550	591 aa		4.83	□□□□□ -1.64
NOP6	YDL213C	MTO1	P53070	669 aa		4.83	□□□□□ -1.64
NOP6	YDL213C	CWC24	P53769	259 aa		4.83	□□□□□ -1.64
NOP6	YDL213C	COG4	Q06096	861 aa		4.83	□□□□□ -1.64
NOP6	YDL213C	FRA1	Q07825	749 aa		4.83	□□□□□ -1.64
NOP6	YDL213C	YLR125W	Q12138	136 aa		4.83	□□□□□ -1.64
NOP6	YDL213C	TSC13	Q99190	310 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms