RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W MRD1Q06106 887 aaKnown RBP6.55□□□□□ -1.36
SUB2YDL084W DBP10Q12389 995 aaKnown RBP6.55□□□□□ -1.36
SUB2YDL084W TRX2P22803 104 aaKnown RBP6.54□□□□□ -1.36
SUB2YDL084W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
SUB2YDL084W PKC1P24583 1151 aa6.54□□□□□ -1.36
SUB2YDL084W UGA3P26370 528 aa6.54□□□□□ -1.36
SUB2YDL084W HIR2P32480 875 aa6.54□□□□□ -1.36
SUB2YDL084W VPS24P36095 224 aaKnown RBP6.54□□□□□ -1.36
SUB2YDL084W HAP5Q02516 242 aa6.54□□□□□ -1.36
SUB2YDL084W PNG1Q02890 363 aa6.54□□□□□ -1.36
SUB2YDL084W SPO71Q03868 1245 aa6.54□□□□□ -1.36
SUB2YDL084W MTC5Q03897 1148 aa6.54□□□□□ -1.36
SUB2YDL084W ORM2Q06144 216 aa6.54□□□□□ -1.36
SUB2YDL084W RKM4Q12504 494 aa6.54□□□□□ -1.36
SUB2YDL084W SSK22P25390 1331 aaPredicted RBP6.54□□□□□ -1.36
SUB2YDL084W SIT4P20604 311 aa6.53□□□□□ -1.36
SUB2YDL084W ZUO1P32527 433 aaKnown RBP6.53□□□□□ -1.36
SUB2YDL084W GRX7P38068 203 aa6.53□□□□□ -1.36
SUB2YDL084W EFM2P38347 419 aa6.53□□□□□ -1.36
SUB2YDL084W PET100P38958 111 aa6.53□□□□□ -1.36
SUB2YDL084W SET2P46995 733 aaKnown RBP6.53□□□□□ -1.36
SUB2YDL084W PEX21P50091 288 aa6.53□□□□□ -1.36
SUB2YDL084W PXR1P53335 271 aaPredicted RBP6.53□□□□□ -1.36
SUB2YDL084W YNL050CP53952 270 aa6.53□□□□□ -1.36
SUB2YDL084W REX2P54964 269 aaKnown RBP6.53□□□□□ -1.36
SUB2YDL084W VMS1Q04311 632 aaKnown RBP6.53□□□□□ -1.36
SUB2YDL084W UTP4Q06679 776 aaKnown RBP6.53□□□□□ -1.36
SUB2YDL084W ISA1Q07821 250 aaPredicted RBP6.53□□□□□ -1.36
SUB2YDL084W GRC3Q07845 632 aa6.53□□□□□ -1.36
SUB2YDL084W SPS1P08458 490 aa6.52□□□□□ -1.37
SUB2YDL084W NAT1P12945 854 aaKnown RBP6.52□□□□□ -1.37
SUB2YDL084W SEC23P15303 768 aaKnown RBP6.52□□□□□ -1.37
SUB2YDL084W BUD14P27637 709 aa6.52□□□□□ -1.37
SUB2YDL084W ESL2P36168 1195 aa6.52□□□□□ -1.37
SUB2YDL084W MEF2P39677 819 aa6.52□□□□□ -1.37
SUB2YDL084W UTP18P40362 594 aaPredicted RBP6.52□□□□□ -1.37
SUB2YDL084W PAP2P53632 584 aaKnown RBP6.52□□□□□ -1.37
SUB2YDL084W HEH2Q03281 663 aa6.52□□□□□ -1.37
SUB2YDL084W CWC21Q03375 135 aaKnown RBP6.52□□□□□ -1.37
SUB2YDL084W PMT7Q06644 662 aa6.52□□□□□ -1.37
SUB2YDL084W MDM38Q08179 573 aa6.52□□□□□ -1.37
SUB2YDL084W JNM1P36224 373 aa6.51□□□□□ -1.37
SUB2YDL084W OTU2P38747 307 aaKnown RBP6.51□□□□□ -1.37
SUB2YDL084W BFR1P38934 470 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37 RIP-Chip
SUB2YDL084W BEM4P39011 633 aa6.51□□□□□ -1.37
SUB2YDL084W ILV3P39522 585 aaKnown RBP6.51□□□□□ -1.37
SUB2YDL084W SWD1P39706 426 aa6.51□□□□□ -1.37
SUB2YDL084W MXR1P40029 184 aa6.51□□□□□ -1.37
SUB2YDL084W BDP1P46678 594 aa6.51□□□□□ -1.37
SUB2YDL084W YML119WQ03208 357 aa6.51□□□□□ -1.37
SUB2YDL084W ARV1Q06541 321 aa6.51□□□□□ -1.37
SUB2YDL084W THS1P04801 734 aaKnown RBP6.5□□□□□ -1.37
SUB2YDL084W PUF4P25339 888 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
SUB2YDL084W NPL4P33755 580 aa6.5□□□□□ -1.37
SUB2YDL084W RXT2P38255 430 aa6.5□□□□□ -1.37
SUB2YDL084W RRP8P38961 392 aaKnown RBP6.5□□□□□ -1.37
SUB2YDL084W IRR1P40541 1150 aa6.5□□□□□ -1.37
SUB2YDL084W SNZ1Q03148 297 aa6.5□□□□□ -1.37
SUB2YDL084W YDR338CQ05497 695 aa6.5□□□□□ -1.37
SUB2YDL084W IRC3Q06683 689 aa6.5□□□□□ -1.37
SUB2YDL084W BMS1Q08965 1183 aaKnown RBP6.5□□□□□ -1.37
SUB2YDL084W FOB1O13329 566 aa6.5□□□□□ -1.37
SUB2YDL084W SPT5P27692 1063 aaKnown RBP6.5□□□□□ -1.37
SUB2YDL084W PEP12P32854 288 aa6.5□□□□□ -1.37
SUB2YDL084W TIF3P34167 436 aaKnown RBP6.5□□□□□ -1.37
SUB2YDL084W ATG19P35193 415 aa6.5□□□□□ -1.37
SUB2YDL084W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
SUB2YDL084W FUI1P38196 639 aa6.5□□□□□ -1.37
SUB2YDL084W PTC2P39966 464 aaKnown RBP6.5□□□□□ -1.37
SUB2YDL084W ARB1P40024 610 aaKnown RBP6.5□□□□□ -1.37
SUB2YDL084W IAH1P41734 238 aa6.5□□□□□ -1.37
SUB2YDL084W ENP2P48234 707 aaKnown RBP6.5□□□□□ -1.37
SUB2YDL084W SEN54Q02825 467 aaPredicted RBP6.5□□□□□ -1.37
SUB2YDL084W SVL3Q03088 825 aaKnown RBP6.5□□□□□ -1.37
SUB2YDL084W YML082WQ04533 649 aaKnown RBP6.5□□□□□ -1.37
SUB2YDL084W SLK19Q08581 821 aaKnown RBP6.5□□□□□ -1.37
SUB2YDL084W SLX4Q12098 748 aa6.5□□□□□ -1.37
SUB2YDL084W YOL098CQ12496 1037 aa6.5□□□□□ -1.37
SUB2YDL084W HNM1P19807 563 aa6.49□□□□□ -1.37
SUB2YDL084W ACE2P21192 770 aa6.49□□□□□ -1.37
SUB2YDL084W FAR1P21268 830 aa6.49□□□□□ -1.37
SUB2YDL084W MRPL25P23369 157 aa6.49□□□□□ -1.37
SUB2YDL084W KRR1P25586 316 aaPredicted RBP6.49□□□□□ -1.37
SUB2YDL084W MRE11P32829 692 aa6.49□□□□□ -1.37
SUB2YDL084W DLD1P32891 587 aa6.49□□□□□ -1.37
SUB2YDL084W ABZ1P37254 787 aaPredicted RBP6.49□□□□□ -1.37
SUB2YDL084W YLF2P38746 405 aa6.49□□□□□ -1.37
SUB2YDL084W YER034WP40022 185 aaKnown RBP6.49□□□□□ -1.37
SUB2YDL084W DOT6P40059 670 aaKnown RBP6.49□□□□□ -1.37
SUB2YDL084W MAM1P40065 302 aa6.49□□□□□ -1.37
SUB2YDL084W PXA1P41909 870 aa6.49□□□□□ -1.37
SUB2YDL084W POB3Q04636 552 aaKnown RBP6.49□□□□□ -1.37
SUB2YDL084W ATG38Q05789 226 aaKnown RBP6.49□□□□□ -1.37
SUB2YDL084W SMD2Q06217 110 aaKnown RBP6.49□□□□□ -1.37
SUB2YDL084W MPC54Q08550 464 aa6.49□□□□□ -1.37
SUB2YDL084W PRT1P06103 763 aaKnown RBP6.48□□□□□ -1.37
SUB2YDL084W GRX4P32642 244 aa6.48□□□□□ -1.37
SUB2YDL084W HSE1P38753 452 aa6.48□□□□□ -1.37
SUB2YDL084W IOC3P43596 787 aa6.48□□□□□ -1.37
SUB2YDL084W HOP2P53187 214 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms