RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C TCB2P48231 1178 aa7.05□□□□□ -1.28
MDH3YDL078C YRB30P53107 440 aaPredicted RBP7.05□□□□□ -1.28
MDH3YDL078C MTC5Q03897 1148 aa7.05□□□□□ -1.28
MDH3YDL078C LDB19Q12502 818 aa7.05□□□□□ -1.28
MDH3YDL078C UBP12P39538 1254 aa7.04□□□□□ -1.28
MDH3YDL078C RRD1P40454 393 aaKnown RBP7.04□□□□□ -1.28
MDH3YDL078C YGR122WP53272 402 aa7.04□□□□□ -1.28
MDH3YDL078C YLR278CQ05854 1341 aa7.03□□□□□ -1.28
MDH3YDL078C TRP5P00931 707 aaKnown RBP7.03□□□□□ -1.28
MDH3YDL078C RAD24P32641 659 aa7.03□□□□□ -1.28
MDH3YDL078C GLC3P32775 704 aa7.03□□□□□ -1.28
MDH3YDL078C RVB2Q12464 471 aaKnown RBP7.03□□□□□ -1.28
MDH3YDL078C SWC3P31376 625 aa7.02□□□□□ -1.29
MDH3YDL078C MGM1P32266 881 aa7.02□□□□□ -1.29
MDH3YDL078C NGR1P32831 672 aaKnown RBP7.02□□□□□ -1.29
MDH3YDL078C TIM50Q02776 476 aa7.02□□□□□ -1.29
MDH3YDL078C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
MDH3YDL078C CSI1Q04368 295 aa7.02□□□□□ -1.29
MDH3YDL078C CRF1Q04930 467 aa7.02□□□□□ -1.29
MDH3YDL078C SNU66Q12420 587 aaPredicted RBP7.02□□□□□ -1.29
MDH3YDL078C RPS19AP07280 144 aaKnown RBP7.01□□□□□ -1.29
MDH3YDL078C RPS19BP07281 144 aaPredicted RBP7.01□□□□□ -1.29
MDH3YDL078C BOI2P39969 1040 aa7.01□□□□□ -1.29
MDH3YDL078C FET4P40988 552 aa7.01□□□□□ -1.29
MDH3YDL078C RPT4P53549 437 aaKnown RBP7.01□□□□□ -1.29
MDH3YDL078C SRC1Q03707 834 aa7.01□□□□□ -1.29
MDH3YDL078C THI3Q07471 609 aa7.01□□□□□ -1.29
MDH3YDL078C RRG1Q12167 365 aaPredicted RBP7.01□□□□□ -1.29
MDH3YDL078C SPL2P38839 148 aa7□□□□□ -1.29
MDH3YDL078C NUG1P40010 520 aaKnown RBP7□□□□□ -1.29
MDH3YDL078C SET4P42948 560 aa7□□□□□ -1.29
MDH3YDL078C IOC2Q12072 812 aa7□□□□□ -1.29
MDH3YDL078C AIM7Q12156 149 aa7□□□□□ -1.29
MDH3YDL078C QCR6P00127 147 aa6.99□□□□□ -1.29
MDH3YDL078C GAP1P19145 602 aaPredicted RBP6.99□□□□□ -1.29
MDH3YDL078C MAK11P20484 414 aaKnown RBP6.99□□□□□ -1.29
MDH3YDL078C AFG2P32794 780 aa6.99□□□□□ -1.29
MDH3YDL078C VHR2P40041 505 aa6.99□□□□□ -1.29
MDH3YDL078C TRM44Q02648 567 aaKnown RBP6.99□□□□□ -1.29
MDH3YDL078C GAS5Q08193 484 aa6.99□□□□□ -1.29
MDH3YDL078C DAL5P15365 543 aa6.98□□□□□ -1.29
MDH3YDL078C YIL092WP40497 633 aa6.98□□□□□ -1.29
MDH3YDL078C EMP47P43555 445 aa6.98□□□□□ -1.29
MDH3YDL078C VPS70P47161 811 aa6.98□□□□□ -1.29
MDH3YDL078C YGR117CP53270 476 aa6.98□□□□□ -1.29
MDH3YDL078C PRP42Q03776 544 aaKnown RBP6.98□□□□□ -1.29
MDH3YDL078C PSF3Q12146 194 aa6.98□□□□□ -1.29
MDH3YDL078C BMT6Q12291 365 aa6.98□□□□□ -1.29
MDH3YDL078C FIG2P25653 1609 aa6.98□□□□□ -1.29
MDH3YDL078C RAD2P07276 1031 aa6.97□□□□□ -1.29
MDH3YDL078C GSM1P42950 618 aa6.97□□□□□ -1.29
MDH3YDL078C HXT10P43581 546 aa6.97□□□□□ -1.29
MDH3YDL078C IRC4Q03036 179 aa6.97□□□□□ -1.29
MDH3YDL078C ADR1P07248 1323 aa6.97□□□□□ -1.29
MDH3YDL078C TOM1Q03280 3268 aa6.96□□□□□ -1.3
MDH3YDL078C HPR1P17629 752 aaKnown RBP6.96□□□□□ -1.3
MDH3YDL078C LCB1P25045 558 aaKnown RBP6.96□□□□□ -1.3
MDH3YDL078C VPS29P38759 282 aa6.96□□□□□ -1.3
MDH3YDL078C PEA2P40091 420 aa6.96□□□□□ -1.3
MDH3YDL078C HGH1P48362 394 aaKnown RBP6.96□□□□□ -1.3
MDH3YDL078C VPS4P52917 437 aa6.96□□□□□ -1.3
MDH3YDL078C SEN54Q02825 467 aaPredicted RBP6.96□□□□□ -1.3
MDH3YDL078C DUR1,2P32528 1835 aaKnown RBP6.96□□□□□ -1.3
MDH3YDL078C SSF1P38789 453 aaPredicted RBP6.95□□□□□ -1.3
MDH3YDL078C YNG2P38806 282 aaKnown RBP6.95□□□□□ -1.3
MDH3YDL078C JJJ2P46997 583 aa6.95□□□□□ -1.3
MDH3YDL078C CWC15Q03772 175 aaKnown RBP6.95□□□□□ -1.3
MDH3YDL078C ACK1Q07622 623 aaPredicted RBP6.95□□□□□ -1.3
MDH3YDL078C ARG82P07250 355 aa6.94□□□□□ -1.3
MDH3YDL078C PRS1P32895 427 aaKnown RBP6.94□□□□□ -1.3
MDH3YDL078C EAP1P36041 632 aaKnown RBP6.94□□□□□ -1.3
MDH3YDL078C STV1P37296 890 aa6.94□□□□□ -1.3
MDH3YDL078C YIL089WP40500 205 aa6.94□□□□□ -1.3
MDH3YDL078C TOS4Q06266 489 aa6.94□□□□□ -1.3
MDH3YDL078C TYW1Q08960 810 aaKnown RBP6.94□□□□□ -1.3
MDH3YDL078C WRS1Q12109 432 aaKnown RBP6.94□□□□□ -1.3
MDH3YDL078C GYP5Q12344 894 aa6.94□□□□□ -1.3
MDH3YDL078C POM152P39685 1337 aa6.94□□□□□ -1.3
MDH3YDL078C SEC18P18759 758 aaKnown RBP6.93□□□□□ -1.3
MDH3YDL078C SPB4P25808 606 aaPredicted RBP6.93□□□□□ -1.3
MDH3YDL078C GCD7P32502 381 aaPredicted RBP6.92□□□□□ -1.3
MDH3YDL078C YFH7P43591 353 aa6.92□□□□□ -1.3
MDH3YDL078C RLF2Q12495 606 aa6.92□□□□□ -1.3
MDH3YDL078C FLO11P08640 1367 aa6.92□□□□□ -1.3
MDH3YDL078C CBP1P07252 654 aa6.91□□□□□ -1.3
MDH3YDL078C PIF1P07271 859 aa6.91□□□□□ -1.3
MDH3YDL078C RPS7AP26786 190 aaKnown RBP6.91□□□□□ -1.3
MDH3YDL078C SPO1P53541 631 aa6.91□□□□□ -1.3
MDH3YDL078C RRI2Q12348 645 aa6.91□□□□□ -1.3
MDH3YDL078C COQ8P27697 501 aa6.9□□□□□ -1.3
MDH3YDL078C GLO3P38682 493 aaKnown RBP6.9□□□□□ -1.3
MDH3YDL078C ETP1P38748 585 aaKnown RBP6.9□□□□□ -1.3
MDH3YDL078C MTC3P53077 123 aa6.9□□□□□ -1.3
MDH3YDL078C PUS6P53294 404 aa6.9□□□□□ -1.3
MDH3YDL078C DUS1P53759 423 aaKnown RBP6.9□□□□□ -1.3
MDH3YDL078C NCB2Q92317 146 aa6.9□□□□□ -1.3
MDH3YDL078C RTG1P32607 177 aa6.89□□□□□ -1.31
MDH3YDL078C SLA1P32790 1244 aa6.89□□□□□ -1.31
MDH3YDL078C UTP7P40055 554 aaKnown RBP6.89□□□□□ -1.31
MDH3YDL078C YMR1P47147 688 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
Retrieved 100 of 5,963 RNA–protein pairs in 80.1 ms