RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	CUS1	Q02554	436 aa	Predicted RBP	8.06	□□□□□ -1.12
UBS1	YBR165W	RRN6	P32786	894 aa		8.05	□□□□□ -1.12
UBS1	YBR165W	DYS1	P38791	387 aa		8.05	□□□□□ -1.12
UBS1	YBR165W	LSO1	Q3E827	93 aa		8.05	□□□□□ -1.12
UBS1	YBR165W	APC11	Q12157	165 aa		8.04	□□□□□ -1.12
UBS1	YBR165W	LDH1	P38139	375 aa		8.03	□□□□□ -1.12
UBS1	YBR165W	APM2	P38700	605 aa		8.03	□□□□□ -1.12
UBS1	YBR165W	BOL3	P39724	118 aa		8.03	□□□□□ -1.12
UBS1	YBR165W	HEH2	Q03281	663 aa		8.03	□□□□□ -1.12
UBS1	YBR165W	TY1A-DR2	Q03964	440 aa	Known RBP	8.03	□□□□□ -1.12
UBS1	YBR165W	YOR296W	Q08748	1289 aa		8.02	□□□□□ -1.13
UBS1	YBR165W	GPM1	P00950	247 aa	Known RBP	8.01	□□□□□ -1.13
UBS1	YBR165W	FUR4	P05316	633 aa	Known RBP	8.01	□□□□□ -1.13
UBS1	YBR165W	CDC3	P32457	520 aa	Known RBP	8.01	□□□□□ -1.13
UBS1	YBR165W	BOI1	P38041	980 aa	Known RBP	8.01	□□□□□ -1.13
UBS1	YBR165W	NCL1	P38205	684 aa	Known RBP	8.01	□□□□□ -1.13
UBS1	YBR165W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	7.99	□□□□□ -1.13	not detected
UBS1	YBR165W	KTR2	P33550	425 aa		7.99	□□□□□ -1.13
UBS1	YBR165W	GIP1	P38229	639 aa		7.99	□□□□□ -1.13
UBS1	YBR165W	YNR040W	P53736	256 aa		7.99	□□□□□ -1.13
UBS1	YBR165W	KNS1	P32350	737 aa	Predicted RBP	7.98	□□□□□ -1.13
UBS1	YBR165W	RGA2	Q06407	1009 aa		7.98	□□□□□ -1.13
UBS1	YBR165W	AI1	P03875	834 aa		7.97	□□□□□ -1.13
UBS1	YBR165W	MSN1	P22148	382 aa		7.97	□□□□□ -1.13
UBS1	YBR165W	HXT8	P40886	569 aa		7.97	□□□□□ -1.13
UBS1	YBR165W	ITC1	P53125	1264 aa		7.97	□□□□□ -1.13
UBS1	YBR165W	KAR5	Q04746	504 aa		7.97	□□□□□ -1.13
UBS1	YBR165W	PDC5	P16467	563 aa	Known RBP	7.96	□□□□□ -1.14
UBS1	YBR165W	ISW1	P38144	1129 aa		7.96	□□□□□ -1.14
UBS1	YBR165W	BSD2	P38356	321 aa		7.96	□□□□□ -1.14
UBS1	YBR165W	YER156C	P40093	338 aa	Known RBP	7.95	□□□□□ -1.14
UBS1	YBR165W	PRK1	P40494	810 aa		7.94	□□□□□ -1.14
UBS1	YBR165W	YFL066C	P43538	392 aa		7.94	□□□□□ -1.14
UBS1	YBR165W	ATG1	P53104	897 aa		7.94	□□□□□ -1.14
UBS1	YBR165W	RPB10	P22139	70 aa		7.93	□□□□□ -1.14
UBS1	YBR165W	IDI1	P15496	288 aa		7.92	□□□□□ -1.14
UBS1	YBR165W	YBR287W	P38355	427 aa		7.92	□□□□□ -1.14
UBS1	YBR165W	SUT1	P53032	299 aa	Known RBP	7.92	□□□□□ -1.14
UBS1	YBR165W	TRL1	P09880	827 aa	Known RBP	7.91	□□□□□ -1.14
UBS1	YBR165W	FIR1	P40020	876 aa		7.91	□□□□□ -1.14
UBS1	YBR165W	NTA1	P40354	457 aa		7.91	□□□□□ -1.14
UBS1	YBR165W	YIL165C	P40446	119 aa		7.91	□□□□□ -1.14
UBS1	YBR165W	RGD2	P43556	714 aa		7.91	□□□□□ -1.14
UBS1	YBR165W	GLO3	P38682	493 aa	Known RBP	7.9	□□□□□ -1.14
UBS1	YBR165W	ICP55	P40051	511 aa		7.9	□□□□□ -1.14
UBS1	YBR165W	QDR1	P40475	563 aa		7.9	□□□□□ -1.14
UBS1	YBR165W	ACF4	P47129	309 aa		7.9	□□□□□ -1.14
UBS1	YBR165W	SMC1	P32908	1225 aa		7.89	□□□□□ -1.15
UBS1	YBR165W	MDJ1	P35191	511 aa		7.89	□□□□□ -1.15
UBS1	YBR165W	EMG1	Q06287	252 aa	Known RBP	7.89	□□□□□ -1.15
UBS1	YBR165W	THI72	Q08579	599 aa		7.89	□□□□□ -1.15
UBS1	YBR165W	PHM7	Q12252	991 aa		7.89	□□□□□ -1.15
UBS1	YBR165W	MET1	P36150	593 aa		7.87	□□□□□ -1.15
UBS1	YBR165W	RAD55	P38953	406 aa		7.87	□□□□□ -1.15
UBS1	YBR165W	NSG2	P53898	299 aa		7.87	□□□□□ -1.15
UBS1	YBR165W	HAT1	Q12341	374 aa		7.87	□□□□□ -1.15
UBS1	YBR165W	ERP5	P38819	212 aa		7.86	□□□□□ -1.15
UBS1	YBR165W	SBE2	P42223	864 aa	Known RBP	7.86	□□□□□ -1.15
UBS1	YBR165W	RSC2	Q06488	889 aa		7.86	□□□□□ -1.15
UBS1	YBR165W	AIM46	P38885	310 aa		7.85	□□□□□ -1.15
UBS1	YBR165W	MDJ2	P42834	146 aa		7.85	□□□□□ -1.15
UBS1	YBR165W	UFD2	P54860	961 aa		7.85	□□□□□ -1.15
UBS1	YBR165W	TIF6	Q12522	245 aa	Known RBP	7.85	□□□□□ -1.15
UBS1	YBR165W	YBL113C	Q7M4S9	792 aa		7.85	□□□□□ -1.15
UBS1	YBR165W	MRP10	O75012	95 aa		7.84	□□□□□ -1.15
UBS1	YBR165W	IRS4	P36115	615 aa	Known RBP	7.84	□□□□□ -1.15
UBS1	YBR165W	YNR014W	P53719	212 aa		7.84	□□□□□ -1.15
UBS1	YBR165W	MCX1	P38323	520 aa	Predicted RBP	7.83	□□□□□ -1.16
UBS1	YBR165W	PSY2	P40164	858 aa		7.83	□□□□□ -1.16
UBS1	YBR165W	GIS4	Q04233	774 aa		7.83	□□□□□ -1.16
UBS1	YBR165W	NAR1	P23503	491 aa	Known RBP	7.82	□□□□□ -1.16
UBS1	YBR165W	BOI2	P39969	1040 aa		7.82	□□□□□ -1.16
UBS1	YBR165W	PPT1	P53043	513 aa		7.82	□□□□□ -1.16
UBS1	YBR165W	RSC4	Q02206	625 aa		7.82	□□□□□ -1.16
UBS1	YBR165W	TRS120	Q04183	1289 aa		7.82	□□□□□ -1.16
UBS1	YBR165W	TDA6	Q06466	467 aa		7.82	□□□□□ -1.16
UBS1	YBR165W	PGM2	P37012	569 aa	Known RBP	7.81	□□□□□ -1.16
UBS1	YBR165W	PUS1	Q12211	544 aa	Known RBP	7.81	□□□□□ -1.16
UBS1	YBR165W	NHA1	Q99271	985 aa		7.81	□□□□□ -1.16
UBS1	YBR165W	GRS1	P38088	690 aa	Known RBP	7.8	□□□□□ -1.16
UBS1	YBR165W	ALG14	P38242	237 aa		7.8	□□□□□ -1.16
UBS1	YBR165W	SSF1	P38789	453 aa	Predicted RBP	7.8	□□□□□ -1.16
UBS1	YBR165W	MNL2	Q12205	849 aa		7.8	□□□□□ -1.16
UBS1	YBR165W	SLP1	Q12232	587 aa		7.79	□□□□□ -1.16
UBS1	YBR165W	INP51	P40559	946 aa	Known RBP	7.78	□□□□□ -1.16
UBS1	YBR165W	BIO5	P53744	561 aa	Known RBP	7.77	□□□□□ -1.17
UBS1	YBR165W	YPR053C	Q6Q5F3	151 aa		7.77	□□□□□ -1.17
UBS1	YBR165W	FUS1	P11710	512 aa		7.76	□□□□□ -1.17
UBS1	YBR165W	SKN7	P38889	622 aa		7.76	□□□□□ -1.17
UBS1	YBR165W	YNL011C	P53980	444 aa		7.76	□□□□□ -1.17
UBS1	YBR165W	YMR187C	Q03236	431 aa		7.76	□□□□□ -1.17
UBS1	YBR165W	MTC5	Q03897	1148 aa		7.76	□□□□□ -1.17
UBS1	YBR165W	NUT2	Q06213	157 aa		7.76	□□□□□ -1.17
UBS1	YBR165W	FRT1	Q99332	602 aa		7.76	□□□□□ -1.17
UBS1	YBR165W	YJL181W	P46987	611 aa		7.75	□□□□□ -1.17
UBS1	YBR165W	ALD3	P54114	506 aa		7.75	□□□□□ -1.17
UBS1	YBR165W	SOG2	Q08817	791 aa		7.75	□□□□□ -1.17
UBS1	YBR165W	CDC55	Q00362	526 aa		7.74	□□□□□ -1.17
UBS1	YBR165W	PYC2	P32327	1180 aa	Known RBP	7.73	□□□□□ -1.17
UBS1	YBR165W	TFA2	P36145	328 aa		7.73	□□□□□ -1.17

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms