RNA–Protein interactions for RNA: ENST00000579458.1

PCAT18-201, prostate cancer associated transcript 18, humanhuman

TSL 2 BASIC

Gene PCAT18, Length 2,598 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT18-201ENST00000579458 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.62□□□□□ -0.39
PCAT18-201ENST00000579458 PROCA1Q8NCQ7 364 aaPredicted RBP12.62□□□□□ -0.39
PCAT18-201ENST00000579458 WDR78Q5VTH9 848 aa12.61□□□□□ -0.39
PCAT18-201ENST00000579458 CCDC144BQ3MJ40 725 aa12.61□□□□□ -0.39
PCAT18-201ENST00000579458 HELBQ8NG08 1087 aaPredicted RBP12.61□□□□□ -0.39
PCAT18-201ENST00000579458 STAC3Q96MF2 364 aa12.61□□□□□ -0.39
PCAT18-201ENST00000579458 NRBP1Q9UHY1 535 aa12.61□□□□□ -0.39
PCAT18-201ENST00000579458 GPR37O15354 613 aa12.6□□□□□ -0.39
PCAT18-201ENST00000579458 SDE2Q6IQ49 451 aa12.6□□□□□ -0.39
PCAT18-201ENST00000579458 MRC2Q9UBG0 1479 aa12.6□□□□□ -0.39
PCAT18-201ENST00000579458 FANCD2Q9BXW9 1451 aa12.59□□□□□ -0.39
PCAT18-201ENST00000579458 PPP4CP60510 307 aa12.59□□□□□ -0.39
PCAT18-201ENST00000579458 CFAP70Q5T0N1 1121 aa12.59□□□□□ -0.39
PCAT18-201ENST00000579458 NPAS4Q8IUM7 802 aa12.59□□□□□ -0.39
PCAT18-201ENST00000579458 WDR62O43379 1518 aa12.59□□□□□ -0.39
PCAT18-201ENST00000579458 TTC36A6NLP5 189 aa12.59□□□□□ -0.39
PCAT18-201ENST00000579458 ANP32CO43423 234 aa12.59□□□□□ -0.39
PCAT18-201ENST00000579458 ATL2Q8NHH9 583 aa12.59□□□□□ -0.39
PCAT18-201ENST00000579458 CXorf38Q8TB03 319 aa12.58□□□□□ -0.4
PCAT18-201ENST00000579458 CCDC88BA6NC98 1476 aa12.58□□□□□ -0.4
PCAT18-201ENST00000579458 CEP164Q9UPV0 1460 aa12.58□□□□□ -0.4
PCAT18-201ENST00000579458 RPGRIP1LQ68CZ1 1315 aa12.58□□□□□ -0.4
PCAT18-201ENST00000579458 ARHGEF10LQ9HCE6 1279 aa12.58□□□□□ -0.4
PCAT18-201ENST00000579458 TBX22Q9Y458 520 aa12.58□□□□□ -0.4
PCAT18-201ENST00000579458 HMGB1P1B2RPK0 211 aaPredicted RBP12.57□□□□□ -0.4
PCAT18-201ENST00000579458 HOXA2O43364 376 aa12.57□□□□□ -0.4
PCAT18-201ENST00000579458 EIF3JO75822 258 aaKnown RBP12.57□□□□□ -0.4
PCAT18-201ENST00000579458 STK10O94804 968 aaKnown RBP12.57□□□□□ -0.4
PCAT18-201ENST00000579458 NBPF11Q86T75 865 aa12.57□□□□□ -0.4
PCAT18-201ENST00000579458 NOP9Q86U38 636 aaKnown RBP12.57□□□□□ -0.4
PCAT18-201ENST00000579458 COMMD10Q9Y6G5 202 aa12.57□□□□□ -0.4
PCAT18-201ENST00000579458 OXER1Q8TDS5 423 aa12.57□□□□□ -0.4
PCAT18-201ENST00000579458 GNEQ9Y223 722 aaKnown RBP12.57□□□□□ -0.4
PCAT18-201ENST00000579458 AMHR2Q16671 573 aa12.56□□□□□ -0.4
PCAT18-201ENST00000579458 ZKSCAN2Q63HK3 967 aa12.56□□□□□ -0.4
PCAT18-201ENST00000579458 RPS6KC1Q96S38 1066 aa12.56□□□□□ -0.4
PCAT18-201ENST00000579458 PRDM2Q13029 1718 aa12.56□□□□□ -0.4
PCAT18-201ENST00000579458 GOLGA6CA6NDK9 693 aa12.56□□□□□ -0.4
PCAT18-201ENST00000579458 GOLGA6BA6NDN3 693 aa12.56□□□□□ -0.4
PCAT18-201ENST00000579458 GOLGA6DP0CG33 693 aa12.56□□□□□ -0.4
PCAT18-201ENST00000579458 TBX4P57082 545 aa12.56□□□□□ -0.4
PCAT18-201ENST00000579458 TSNAXIP1Q2TAA8 658 aa12.56□□□□□ -0.4
PCAT18-201ENST00000579458 HSP90AB2PQ58FF8 381 aa12.56□□□□□ -0.4
PCAT18-201ENST00000579458 CACTIN-AS1Q8N1I8 211 aa12.56□□□□□ -0.4
PCAT18-201ENST00000579458 ADAMTS19Q8TE59 1207 aa12.56□□□□□ -0.4
PCAT18-201ENST00000579458 GOLGA6AQ9NYA3 693 aa12.56□□□□□ -0.4
PCAT18-201ENST00000579458 FBXO9Q9UK97 447 aaPredicted RBP12.56□□□□□ -0.4
PCAT18-201ENST00000579458 IQSEC3Q9UPP2 1182 aaPredicted RBP12.56□□□□□ -0.4
PCAT18-201ENST00000579458 TTLL12Q14166 644 aaPredicted RBP12.55□□□□□ -0.4
PCAT18-201ENST00000579458 WWC3Q9ULE0 1092 aa12.55□□□□□ -0.4
PCAT18-201ENST00000579458 ERCC5P28715 1186 aaPredicted RBP12.55□□□□□ -0.4
PCAT18-201ENST00000579458 CFAP69A5D8W1 941 aa12.54□□□□□ -0.4
PCAT18-201ENST00000579458 PDAP1Q13442 181 aaKnown RBP12.54□□□□□ -0.4
PCAT18-201ENST00000579458 NBPF1Q3BBV0 1214 aa12.54□□□□□ -0.4
PCAT18-201ENST00000579458 AMOTL1Q8IY63 956 aa12.54□□□□□ -0.4
PCAT18-201ENST00000579458 MPNDQ8N594 471 aa12.54□□□□□ -0.4
PCAT18-201ENST00000579458 CCER1Q8TC90 406 aaPredicted RBP12.54□□□□□ -0.4
PCAT18-201ENST00000579458 STAG1Q8WVM7 1258 aa12.54□□□□□ -0.4
PCAT18-201ENST00000579458 TANGO6Q9C0B7 1094 aa12.54□□□□□ -0.4
PCAT18-201ENST00000579458 LIG1P18858 919 aa12.54□□□□□ -0.4
PCAT18-201ENST00000579458 BIRC2Q13490 618 aa12.54□□□□□ -0.4
PCAT18-201ENST00000579458 REPIN1Q9BWE0 567 aaKnown RBP12.54□□□□□ -0.4
PCAT18-201ENST00000579458 MAP3K20Q9NYL2 800 aaKnown RBP12.54□□□□□ -0.4
PCAT18-201ENST00000579458 C7P10643 843 aa12.53□□□□□ -0.4
PCAT18-201ENST00000579458 CNGB1Q14028 1251 aaPredicted RBP12.53□□□□□ -0.4
PCAT18-201ENST00000579458 FBXO31Q5XUX0 539 aaPredicted RBP12.53□□□□□ -0.4
PCAT18-201ENST00000579458 RPUSD2Q8IZ73 545 aaKnown RBP12.53□□□□□ -0.4
PCAT18-201ENST00000579458 CASC1Q6TDU7 716 aa12.52□□□□□ -0.4
PCAT18-201ENST00000579458 PLEKHG6Q3KR16 790 aa12.51□□□□□ -0.41
PCAT18-201ENST00000579458 IRF2BPLQ9H1B7 796 aa12.51□□□□□ -0.41
PCAT18-201ENST00000579458 HDAC5Q9UQL6 1122 aa12.51□□□□□ -0.41
PCAT18-201ENST00000579458 NOP58Q9Y2X3 529 aaKnown RBP12.51□□□□□ -0.41
PCAT18-201ENST00000579458 DMGDHQ9UI17 866 aaKnown RBP12.51□□□□□ -0.41
PCAT18-201ENST00000579458 STAG3Q9UJ98 1225 aa12.51□□□□□ -0.41
PCAT18-201ENST00000579458 MMP14P50281 582 aa12.5□□□□□ -0.41
PCAT18-201ENST00000579458 URB2Q14146 1524 aaKnown RBP12.5□□□□□ -0.41
PCAT18-201ENST00000579458 SPDYE2BA6NHP3 402 aa12.5□□□□□ -0.41
PCAT18-201ENST00000579458 SPDYE5A6NIY4 337 aa12.5□□□□□ -0.41
PCAT18-201ENST00000579458 SPDYE6P0CI01 402 aa12.5□□□□□ -0.41
PCAT18-201ENST00000579458 SPDYE2Q495Y8 402 aa12.5□□□□□ -0.41
PCAT18-201ENST00000579458 CCDC85AQ96PX6 553 aaPredicted RBP12.5□□□□□ -0.41
PCAT18-201ENST00000579458 TSPAN18Q96SJ8 248 aa12.5□□□□□ -0.41
PCAT18-201ENST00000579458 CTDP1Q9Y5B0 961 aaPredicted RBP12.5□□□□□ -0.41
PCAT18-201ENST00000579458 FMNL3Q8IVF7 1028 aa12.49□□□□□ -0.41
PCAT18-201ENST00000579458 KLF15Q9UIH9 416 aa12.49□□□□□ -0.41
PCAT18-201ENST00000579458 ATP1B4Q9UN42 357 aaPredicted RBP12.49□□□□□ -0.41
PCAT18-201ENST00000579458 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.48□□□□□ -0.417e-8■■■■■ 186.3
PCAT18-201ENST00000579458 TPX2Q9ULW0 747 aaKnown RBP12.48□□□□□ -0.41
PCAT18-201ENST00000579458 PPP1R37O75864 691 aa12.48□□□□□ -0.41
PCAT18-201ENST00000579458 SCP2P22307 547 aa12.48□□□□□ -0.41
PCAT18-201ENST00000579458 SEMA3FQ13275 785 aa12.48□□□□□ -0.41
PCAT18-201ENST00000579458 GIGYF2Q6Y7W6 1299 aaKnown RBP12.48□□□□□ -0.41
PCAT18-201ENST00000579458 JAZF1Q86VZ6 243 aa12.48□□□□□ -0.41
PCAT18-201ENST00000579458 ABL2P42684 1182 aa12.47□□□□□ -0.41
PCAT18-201ENST00000579458 BMS1Q14692 1282 aaKnown RBP12.47□□□□□ -0.41
PCAT18-201ENST00000579458 MKRN1Q9UHC7 482 aaKnown RBP12.47□□□□□ -0.41
PCAT18-201ENST00000579458 FRMD4BQ9Y2L6 1034 aa12.47□□□□□ -0.41
PCAT18-201ENST00000579458 GTF2F1P35269 517 aaKnown RBP eCLIP12.46□□□□□ -0.41
PCAT18-201ENST00000579458 DDX27Q96GQ7 796 aaKnown RBP12.46□□□□□ -0.41
PCAT18-201ENST00000579458 CSPP1Q1MSJ5 1256 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms