RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 ITGBL1O95965 494 aaPredicted RBP9.46□□□□□ -0.9
CAPN3-218ENST00000568153 APLP1P51693 650 aa9.46□□□□□ -0.9
CAPN3-218ENST00000568153 BRPF1P55201 1214 aaPredicted RBP9.46□□□□□ -0.9
CAPN3-218ENST00000568153 TTLL12Q14166 644 aaPredicted RBP9.46□□□□□ -0.9
CAPN3-218ENST00000568153 PARP9Q8IXQ6 854 aa9.46□□□□□ -0.9
CAPN3-218ENST00000568153 TMUB1Q9BVT8 246 aa9.46□□□□□ -0.9
CAPN3-218ENST00000568153 GRIN2BQ13224 1484 aa9.46□□□□□ -0.9
CAPN3-218ENST00000568153 IFFO2Q5TF58 517 aa9.45□□□□□ -0.9
CAPN3-218ENST00000568153 NECTIN2Q92692 538 aa9.45□□□□□ -0.9
CAPN3-218ENST00000568153 GPBP1L1Q9HC44 474 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-218ENST00000568153 FHAD1B1AJZ9 1412 aa9.45□□□□□ -0.9
CAPN3-218ENST00000568153 CLCN1P35523 988 aa9.44□□□□□ -0.9
CAPN3-218ENST00000568153 SLC4A3P48751 1232 aa9.44□□□□□ -0.9
CAPN3-218ENST00000568153 NEUROD2Q15784 382 aa9.44□□□□□ -0.9
CAPN3-218ENST00000568153 CHMP7Q8WUX9 453 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-218ENST00000568153 GPCPD1Q9NPB8 672 aa9.44□□□□□ -0.9
CAPN3-218ENST00000568153 ZNF608Q9ULD9 1512 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-218ENST00000568153 SLC10A3P09131 477 aa9.43□□□□□ -0.9
CAPN3-218ENST00000568153 GIGYF2Q6Y7W6 1299 aaKnown RBP9.43□□□□□ -0.9
CAPN3-218ENST00000568153 DAXXQ9UER7 740 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-218ENST00000568153 ABCA5Q8WWZ7 1642 aa9.42□□□□□ -0.9
CAPN3-218ENST00000568153 TJAP1Q5JTD0 557 aa9.41□□□□□ -0.9
CAPN3-218ENST00000568153 KDM4CQ9H3R0 1056 aa9.41□□□□□ -0.9
CAPN3-218ENST00000568153 THOC2Q8NI27 1593 aaKnown RBP9.41□□□□□ -0.9
CAPN3-218ENST00000568153 VPS8Q8N3P4 1428 aa9.4□□□□□ -0.9
CAPN3-218ENST00000568153 CUL7Q14999 1698 aa9.4□□□□□ -0.9
CAPN3-218ENST00000568153 FAM217BQ9NTX9 383 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-218ENST00000568153 WDR97A6NE52 1622 aa9.39□□□□□ -0.91
CAPN3-218ENST00000568153 CFHP08603 1231 aa9.39□□□□□ -0.91
CAPN3-218ENST00000568153 MTRQ99707 1265 aa9.39□□□□□ -0.91
CAPN3-218ENST00000568153 DDX11L8A8MPP1 907 aa9.38□□□□□ -0.91
CAPN3-218ENST00000568153 MS4A1P11836 297 aa9.38□□□□□ -0.91
CAPN3-218ENST00000568153 SSTR3P32745 418 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-218ENST00000568153 KCNC4Q03721 635 aa9.38□□□□□ -0.91
CAPN3-218ENST00000568153 ARHGAP35Q9NRY4 1499 aa9.37□□□□□ -0.91
CAPN3-218ENST00000568153 PRR14Q9BWN1 585 aa9.37□□□□□ -0.91
CAPN3-218ENST00000568153 ATP1B4Q9UN42 357 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-218ENST00000568153 TTBK1Q5TCY1 1321 aaPredicted RBP9.36□□□□□ -0.91
CAPN3-218ENST00000568153 ACTN4O43707 911 aaKnown RBP9.36□□□□□ -0.91
CAPN3-218ENST00000568153 SNAPC4Q5SXM2 1469 aa9.35□□□□□ -0.91
CAPN3-218ENST00000568153 ARAP1Q96P48 1450 aa9.35□□□□□ -0.91
CAPN3-218ENST00000568153 A0A0G2JS52 829 aa9.35□□□□□ -0.91
CAPN3-218ENST00000568153 KMT5BQ4FZB7 885 aa9.35□□□□□ -0.91
CAPN3-218ENST00000568153 SULF1Q8IWU6 871 aa9.35□□□□□ -0.91
CAPN3-218ENST00000568153 IL21Q9HBE4 155 aa9.35□□□□□ -0.91
CAPN3-218ENST00000568153 MAGI1Q96QZ7 1491 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-218ENST00000568153 CD46P15529 392 aa9.34□□□□□ -0.91
CAPN3-218ENST00000568153 RDH13Q8NBN7 331 aa9.34□□□□□ -0.91
CAPN3-218ENST00000568153 ZNF516Q92618 1163 aa9.34□□□□□ -0.91
CAPN3-218ENST00000568153 PCDHB3Q9Y5E6 796 aa9.34□□□□□ -0.91
CAPN3-218ENST00000568153 COPS2P61201 443 aa9.33□□□□□ -0.92
CAPN3-218ENST00000568153 RSPH4AQ5TD94 716 aa9.33□□□□□ -0.92
CAPN3-218ENST00000568153 FAM117AQ9C073 453 aa9.33□□□□□ -0.92
CAPN3-218ENST00000568153 SYNJ2O15056 1496 aa9.33□□□□□ -0.92
CAPN3-218ENST00000568153 KANK4Q5T7N3 995 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-218ENST00000568153 BLOC1S3Q6QNY0 202 aa9.32□□□□□ -0.92
CAPN3-218ENST00000568153 BEGAINQ9BUH8 593 aa9.32□□□□□ -0.92
CAPN3-218ENST00000568153 KIAA0586Q9BVV6 1533 aa9.31□□□□□ -0.92
CAPN3-218ENST00000568153 GCGRP47871 477 aa9.31□□□□□ -0.92
CAPN3-218ENST00000568153 EIF4G3O43432 1585 aaKnown RBP9.3□□□□□ -0.92
CAPN3-218ENST00000568153 ADAMTS12P58397 1594 aa9.3□□□□□ -0.92
CAPN3-218ENST00000568153 GRIN2AQ12879 1464 aa9.3□□□□□ -0.92
CAPN3-218ENST00000568153 FHOD3Q2V2M9 1422 aa9.3□□□□□ -0.92
CAPN3-218ENST00000568153 FMN1Q68DA7 1419 aa9.3□□□□□ -0.92
CAPN3-218ENST00000568153 PLEKHG3A1L390 1219 aa9.29□□□□□ -0.92
CAPN3-218ENST00000568153 ZPR1O75312 459 aa9.29□□□□□ -0.92
CAPN3-218ENST00000568153 IL27Q8NEV9 243 aa9.29□□□□□ -0.92
CAPN3-218ENST00000568153 EFCAB5A4FU69 1503 aa9.29□□□□□ -0.92
CAPN3-218ENST00000568153 PBRM1Q86U86 1689 aa9.29□□□□□ -0.92
CAPN3-218ENST00000568153 NKX2-3Q8TAU0 364 aa9.28□□□□□ -0.92
CAPN3-218ENST00000568153 FUT2Q10981 343 aa9.27□□□□□ -0.93
CAPN3-218ENST00000568153 DDRGK1Q96HY6 314 aa9.27□□□□□ -0.93
CAPN3-218ENST00000568153 CASKIN1Q8WXD9 1431 aa9.26□□□□□ -0.93
CAPN3-218ENST00000568153 PUS10Q3MIT2 529 aaKnown RBP9.26□□□□□ -0.93
CAPN3-218ENST00000568153 NUP160Q12769 1436 aa9.25□□□□□ -0.93
CAPN3-218ENST00000568153 TLL1O43897 1013 aa9.25□□□□□ -0.93
CAPN3-218ENST00000568153 MORN1Q5T089 497 aa9.25□□□□□ -0.93
CAPN3-218ENST00000568153 SPIRE2Q8WWL2 714 aa9.25□□□□□ -0.93
CAPN3-218ENST00000568153 CARMIL2Q6F5E8 1435 aa9.24□□□□□ -0.93
CAPN3-218ENST00000568153 KDM4AO75164 1064 aa9.24□□□□□ -0.93
CAPN3-218ENST00000568153 NR1I2O75469 434 aa9.24□□□□□ -0.93
CAPN3-218ENST00000568153 ATP6V1AP38606 617 aa9.24□□□□□ -0.93
CAPN3-218ENST00000568153 MAP3K1Q13233 1512 aa9.24□□□□□ -0.93
CAPN3-218ENST00000568153 UGGT2Q9NYU1 1516 aa9.24□□□□□ -0.93
CAPN3-218ENST00000568153 IQGAP2Q13576 1575 aa9.24□□□□□ -0.93
CAPN3-218ENST00000568153 RGS20O76081 388 aa9.23□□□□□ -0.93
CAPN3-218ENST00000568153 SCUBE3Q8IX30 993 aa9.23□□□□□ -0.93
CAPN3-218ENST00000568153 TBC1D2Q9BYX2 928 aa9.23□□□□□ -0.93
CAPN3-218ENST00000568153 PPP1R18Q6NYC8 613 aa9.22□□□□□ -0.93
CAPN3-218ENST00000568153 NUTM1Q86Y26 1132 aa9.22□□□□□ -0.93
CAPN3-218ENST00000568153 CTTNBP2Q8WZ74 1663 aa9.22□□□□□ -0.93
CAPN3-218ENST00000568153 CDK11AQ9UQ88 783 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-218ENST00000568153 SLC27A5Q9Y2P5 690 aa9.21□□□□□ -0.94
CAPN3-218ENST00000568153 FYCO1Q9BQS8 1478 aa9.21□□□□□ -0.94
CAPN3-218ENST00000568153 SAMD9Q5K651 1589 aa9.2□□□□□ -0.94
CAPN3-218ENST00000568153 HOXA2O43364 376 aa9.2□□□□□ -0.94
CAPN3-218ENST00000568153 HRCP23327 699 aa9.2□□□□□ -0.94
CAPN3-218ENST00000568153 MYSM1Q5VVJ2 828 aa9.2□□□□□ -0.94
CAPN3-218ENST00000568153 HLA-CQ95604 372 aa9.2□□□□□ -0.94
CAPN3-218ENST00000568153 THAP11Q96EK4 314 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms