RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 BIVM-ERCC5R4GMW8 1640 aa9.09□□□□□ -0.95
CPSF7-220ENST00000541963 GAPVD1Q14C86 1478 aa9.08□□□□□ -0.96
CPSF7-220ENST00000541963 RNF40O75150 1001 aa9.08□□□□□ -0.96
CPSF7-220ENST00000541963 UBTFP17480 764 aaKnown RBP9.08□□□□□ -0.96
CPSF7-220ENST00000541963 CSPP1Q1MSJ5 1256 aa9.08□□□□□ -0.96
CPSF7-220ENST00000541963 TUSC1Q2TAM9 212 aa9.08□□□□□ -0.96
CPSF7-220ENST00000541963 RSBN1LQ6PCB5 846 aaPredicted RBP9.08□□□□□ -0.96
CPSF7-220ENST00000541963 MOXD2PA6NHM9 499 aa9.07□□□□□ -0.96
CPSF7-220ENST00000541963 GOLGA8CPA6NN73 597 aa9.07□□□□□ -0.96
CPSF7-220ENST00000541963 NUTM2BA6NNL0 878 aaPredicted RBP9.07□□□□□ -0.96
CPSF7-220ENST00000541963 NUTM2EB1AL46 878 aaPredicted RBP9.07□□□□□ -0.96
CPSF7-220ENST00000541963 NUTM2DQ5VT03 806 aaPredicted RBP9.07□□□□□ -0.96
CPSF7-220ENST00000541963 NUTM2AQ8IVF1 878 aaPredicted RBP9.07□□□□□ -0.96
CPSF7-220ENST00000541963 LIMD1Q9UGP4 676 aa9.07□□□□□ -0.96
CPSF7-220ENST00000541963 MAGI1Q96QZ7 1491 aaPredicted RBP9.07□□□□□ -0.96
CPSF7-220ENST00000541963 RAD21O60216 631 aa9.06□□□□□ -0.96
CPSF7-220ENST00000541963 RFC5P40937 340 aa9.06□□□□□ -0.96
CPSF7-220ENST00000541963 SAMD7Q7Z3H4 446 aa9.06□□□□□ -0.96
CPSF7-220ENST00000541963 BANK1Q8NDB2 785 aa9.06□□□□□ -0.96
CPSF7-220ENST00000541963 SNAPC4Q5SXM2 1469 aa9.06□□□□□ -0.96
CPSF7-220ENST00000541963 SYNJ1O43426 1573 aa9.06□□□□□ -0.96
CPSF7-220ENST00000541963 NDUFV2P19404 249 aa9.05□□□□□ -0.96
CPSF7-220ENST00000541963 SLC10A3P09131 477 aa9.04□□□□□ -0.96
CPSF7-220ENST00000541963 FDX1P10109 184 aa9.04□□□□□ -0.96
CPSF7-220ENST00000541963 KMT5BQ4FZB7 885 aa9.04□□□□□ -0.96
CPSF7-220ENST00000541963 PPP2R2DQ66LE6 453 aa9.04□□□□□ -0.96
CPSF7-220ENST00000541963 LRCH3Q96II8 777 aa9.04□□□□□ -0.96
CPSF7-220ENST00000541963 ZFRQ96KR1 1074 aaKnown RBP9.04□□□□□ -0.96
CPSF7-220ENST00000541963 CHD1O14646 1710 aa9.04□□□□□ -0.96
CPSF7-220ENST00000541963 SYNJ2O15056 1496 aa9.03□□□□□ -0.96
CPSF7-220ENST00000541963 BHMG1C9JSJ3 638 aaPredicted RBP9.03□□□□□ -0.96
CPSF7-220ENST00000541963 APBB1O00213 710 aa9.03□□□□□ -0.96
CPSF7-220ENST00000541963 LSM11P83369 360 aaKnown RBP eCLIP9.03□□□□□ -0.96
CPSF7-220ENST00000541963 MCM6Q14566 821 aa9.03□□□□□ -0.96
CPSF7-220ENST00000541963 PRPF38BQ5VTL8 546 aaKnown RBP9.03□□□□□ -0.96
CPSF7-220ENST00000541963 ADGRD1Q6QNK2 874 aa9.03□□□□□ -0.96
CPSF7-220ENST00000541963 PRM3Q9NNZ6 103 aa9.03□□□□□ -0.96
CPSF7-220ENST00000541963 PBRM1Q86U86 1689 aa9.03□□□□□ -0.96
CPSF7-220ENST00000541963 ABCA5Q8WWZ7 1642 aa9.02□□□□□ -0.96
CPSF7-220ENST00000541963 SPDYE5A6NIY4 337 aa9.02□□□□□ -0.97
CPSF7-220ENST00000541963 HOXA2O43364 376 aa9.02□□□□□ -0.97
CPSF7-220ENST00000541963 CFHP08603 1231 aa9.02□□□□□ -0.97
CPSF7-220ENST00000541963 ANKRD13DQ6ZTN6 518 aa9.02□□□□□ -0.97
CPSF7-220ENST00000541963 ZBTB3Q9H5J0 574 aa9.02□□□□□ -0.97
CPSF7-220ENST00000541963 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-220ENST00000541963 ANKK1Q8NFD2 765 aa9.01□□□□□ -0.97
CPSF7-220ENST00000541963 PRR14Q9BWN1 585 aa9.01□□□□□ -0.97
CPSF7-220ENST00000541963 PCDHB15Q9Y5E8 787 aa9.01□□□□□ -0.97
CPSF7-220ENST00000541963 A6NJR5 290 aa9□□□□□ -0.97
CPSF7-220ENST00000541963 LILRB3O75022 631 aa9□□□□□ -0.97
CPSF7-220ENST00000541963 FHAD1B1AJZ9 1412 aa8.99□□□□□ -0.97
CPSF7-220ENST00000541963 POTEB3A0JP26 581 aa8.99□□□□□ -0.97
CPSF7-220ENST00000541963 AP1G2O75843 785 aa8.99□□□□□ -0.97
CPSF7-220ENST00000541963 ATP6V1AP38606 617 aa8.99□□□□□ -0.97
CPSF7-220ENST00000541963 POTEBQ6S5H4 581 aa8.99□□□□□ -0.97
CPSF7-220ENST00000541963 ERICH3Q5RHP9 1530 aa8.99□□□□□ -0.97
CPSF7-220ENST00000541963 KIF27Q86VH2 1401 aa8.98□□□□□ -0.97
CPSF7-220ENST00000541963 QPCTQ16769 361 aa8.98□□□□□ -0.97
CPSF7-220ENST00000541963 WWC1Q8IX03 1113 aa8.98□□□□□ -0.97
CPSF7-220ENST00000541963 ARXQ96QS3 562 aa8.98□□□□□ -0.97
CPSF7-220ENST00000541963 C6orf229H3BNL8 230 aa8.97□□□□□ -0.97
CPSF7-220ENST00000541963 HRCP23327 699 aa8.97□□□□□ -0.97
CPSF7-220ENST00000541963 PPP4CP60510 307 aa8.97□□□□□ -0.97
CPSF7-220ENST00000541963 FUT2Q10981 343 aa8.97□□□□□ -0.97
CPSF7-220ENST00000541963 MTMR2Q13614 643 aa8.97□□□□□ -0.97
CPSF7-220ENST00000541963 CABLES1Q8TDN4 633 aa8.97□□□□□ -0.97
CPSF7-220ENST00000541963 CLUAP1Q96AJ1 413 aa8.97□□□□□ -0.97
CPSF7-220ENST00000541963 RIMBP3CA6NJZ7 1639 aa8.97□□□□□ -0.97
CPSF7-220ENST00000541963 RIMBP3BA6NNM3 1639 aa8.97□□□□□ -0.97
CPSF7-220ENST00000541963 RIMBP3Q9UFD9 1639 aa8.97□□□□□ -0.97
CPSF7-220ENST00000541963 ARHGEF11O15085 1522 aa8.96□□□□□ -0.97
CPSF7-220ENST00000541963 RTL5Q5HYW3 569 aaPredicted RBP8.96□□□□□ -0.98
CPSF7-220ENST00000541963 CYB5RLQ6IPT4 315 aa8.96□□□□□ -0.98
CPSF7-220ENST00000541963 Q3C1V9 767 aa8.95□□□□□ -0.98
CPSF7-220ENST00000541963 HELBQ8NG08 1087 aaPredicted RBP8.95□□□□□ -0.98
CPSF7-220ENST00000541963 TSC1Q92574 1164 aa8.95□□□□□ -0.98
CPSF7-220ENST00000541963 SNRKQ9NRH2 765 aa8.95□□□□□ -0.98
CPSF7-220ENST00000541963 GRIN2AQ12879 1464 aa8.95□□□□□ -0.98
CPSF7-220ENST00000541963 ADAMTS12P58397 1594 aa8.95□□□□□ -0.98
CPSF7-220ENST00000541963 HRO43593 1189 aa8.94□□□□□ -0.98
CPSF7-220ENST00000541963 ACTN4O43707 911 aaKnown RBP8.94□□□□□ -0.98
CPSF7-220ENST00000541963 TRAK2O60296 914 aa8.94□□□□□ -0.98
CPSF7-220ENST00000541963 GUCA2AQ02747 115 aa8.94□□□□□ -0.98
CPSF7-220ENST00000541963 CLASP1Q7Z460 1538 aa8.94□□□□□ -0.98
CPSF7-220ENST00000541963 PROSER2Q86WR7 435 aaPredicted RBP8.93□□□□□ -0.98
CPSF7-220ENST00000541963 WNT2BQ93097 391 aa8.93□□□□□ -0.98
CPSF7-220ENST00000541963 TSR3Q9UJK0 312 aaKnown RBP8.93□□□□□ -0.98
CPSF7-220ENST00000541963 PCDHGC3Q9UN70 934 aa8.93□□□□□ -0.98
CPSF7-220ENST00000541963 IGF1RP08069 1367 aa8.93□□□□□ -0.98
CPSF7-220ENST00000541963 SOWAHBA6NEL2 793 aa8.92□□□□□ -0.98
CPSF7-220ENST00000541963 FBXO31Q5XUX0 539 aaPredicted RBP8.92□□□□□ -0.98
CPSF7-220ENST00000541963 HLA-CQ95604 372 aa8.92□□□□□ -0.98
CPSF7-220ENST00000541963 HPS5Q9UPZ3 1129 aa8.92□□□□□ -0.98
CPSF7-220ENST00000541963 NUP160Q12769 1436 aa8.91□□□□□ -0.98
CPSF7-220ENST00000541963 SOCS7O14512 581 aa8.91□□□□□ -0.98
CPSF7-220ENST00000541963 USP17L8P0C7I0 530 aa8.91□□□□□ -0.98
CPSF7-220ENST00000541963 HOMEZQ8IX15 550 aa8.91□□□□□ -0.98
CPSF7-220ENST00000541963 CARMIL1Q5VZK9 1371 aa8.9□□□□□ -0.98
CPSF7-220ENST00000541963 LCE2DQ5TA82 110 aaPredicted RBP8.9□□□□□ -0.98
CPSF7-220ENST00000541963 COG6Q9Y2V7 657 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms