RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 TATP17735 454 aaPredicted RBP10.95□□□□□ -0.66
KLHL3-209ENST00000508657 KRT18P05783 430 aaKnown RBP10.95□□□□□ -0.66
KLHL3-209ENST00000508657 FHOD3Q2V2M9 1422 aa10.95□□□□□ -0.66
KLHL3-209ENST00000508657 RALYLQ86SE5 291 aaKnown RBP10.94□□□□□ -0.66
KLHL3-209ENST00000508657 VTI1AQ96AJ9 217 aa10.94□□□□□ -0.66
KLHL3-209ENST00000508657 CSPP1Q1MSJ5 1256 aa10.94□□□□□ -0.66
KLHL3-209ENST00000508657 FAM161AQ3B820 660 aa10.94□□□□□ -0.66
KLHL3-209ENST00000508657 TPM1P09493 284 aa10.94□□□□□ -0.66
KLHL3-209ENST00000508657 TRMT1LQ7Z2T5 733 aaKnown RBP10.94□□□□□ -0.66
KLHL3-209ENST00000508657 SIL1Q9H173 461 aa10.94□□□□□ -0.66
KLHL3-209ENST00000508657 TTC39AQ5SRH9 613 aa10.93□□□□□ -0.66
KLHL3-209ENST00000508657 ST18O60284 1047 aa10.93□□□□□ -0.66
KLHL3-209ENST00000508657 BECN2A8MW95 431 aa10.93□□□□□ -0.66
KLHL3-209ENST00000508657 TTLL5Q6EMB2 1281 aa10.93□□□□□ -0.66
KLHL3-209ENST00000508657 AK7Q96M32 723 aa10.93□□□□□ -0.66
KLHL3-209ENST00000508657 UBAP1LF5GYI3 381 aa10.93□□□□□ -0.66
KLHL3-209ENST00000508657 GOLGA6L19H0YKK7 550 aa10.93□□□□□ -0.66
KLHL3-209ENST00000508657 ZNF592Q92610 1267 aa10.93□□□□□ -0.66
KLHL3-209ENST00000508657 CDK5RAP3Q96JB5 506 aa10.92□□□□□ -0.66
KLHL3-209ENST00000508657 TBC1D2BQ9UPU7 963 aa10.92□□□□□ -0.66
KLHL3-209ENST00000508657 ST20-MTHFSA0A0A6YYL1 179 aa10.92□□□□□ -0.66
KLHL3-209ENST00000508657 PRDM2Q13029 1718 aa10.92□□□□□ -0.66
KLHL3-209ENST00000508657 USP5P45974 858 aa10.91□□□□□ -0.66
KLHL3-209ENST00000508657 ZNF622Q969S3 477 aaKnown RBP eCLIP10.91□□□□□ -0.66
KLHL3-209ENST00000508657 MPHOSPH8Q99549 860 aa10.91□□□□□ -0.66
KLHL3-209ENST00000508657 ZPR1O75312 459 aa10.91□□□□□ -0.66
KLHL3-209ENST00000508657 VPS37CA5D8V6 355 aaPredicted RBP10.91□□□□□ -0.66
KLHL3-209ENST00000508657 ANKLE2Q86XL3 938 aa10.91□□□□□ -0.66
KLHL3-209ENST00000508657 L3MBTL2Q969R5 705 aa10.9□□□□□ -0.66
KLHL3-209ENST00000508657 CCDC144AA2RUR9 1427 aa10.9□□□□□ -0.66
KLHL3-209ENST00000508657 OFD1O75665 1012 aa10.9□□□□□ -0.66
KLHL3-209ENST00000508657 SAFBQ15424 915 aaKnown RBP eCLIP10.9□□□□□ -0.66
KLHL3-209ENST00000508657 BICD2Q8TD16 824 aa10.9□□□□□ -0.66
KLHL3-209ENST00000508657 NEBLO76041 1014 aa10.9□□□□□ -0.67
KLHL3-209ENST00000508657 ZKSCAN1P17029 563 aaPredicted RBP10.89□□□□□ -0.67
KLHL3-209ENST00000508657 RALBP1Q15311 655 aa10.89□□□□□ -0.67
KLHL3-209ENST00000508657 RUFY2Q8WXA3 655 aa10.89□□□□□ -0.67
KLHL3-209ENST00000508657 PDCL3Q9H2J4 239 aa10.89□□□□□ -0.67
KLHL3-209ENST00000508657 SETD5Q9C0A6 1442 aa10.89□□□□□ -0.67
KLHL3-209ENST00000508657 PTCD1O75127 700 aaKnown RBP10.89□□□□□ -0.67
KLHL3-209ENST00000508657 BRMS1Q9HCU9 246 aa10.89□□□□□ -0.67
KLHL3-209ENST00000508657 SLC4A8Q2Y0W8 1093 aa10.89□□□□□ -0.67
KLHL3-209ENST00000508657 TMOD2Q9NZR1 351 aa10.89□□□□□ -0.67
KLHL3-209ENST00000508657 ANKIB1Q9P2G1 1089 aa10.89□□□□□ -0.67
KLHL3-209ENST00000508657 COG6Q9Y2V7 657 aa10.88□□□□□ -0.67
KLHL3-209ENST00000508657 CRBNQ96SW2 442 aa10.88□□□□□ -0.67
KLHL3-209ENST00000508657 IPO7O95373 1038 aaKnown RBP10.88□□□□□ -0.67
KLHL3-209ENST00000508657 SLC3A2P08195 630 aaKnown RBP10.88□□□□□ -0.67
KLHL3-209ENST00000508657 ZNF76P36508 570 aa10.88□□□□□ -0.67
KLHL3-209ENST00000508657 PLEKHO1Q53GL0 409 aaPredicted RBP10.88□□□□□ -0.67
KLHL3-209ENST00000508657 ANKRD20A12PQ8NF67 263 aa10.88□□□□□ -0.67
KLHL3-209ENST00000508657 PSMD1Q99460 953 aa10.88□□□□□ -0.67
KLHL3-209ENST00000508657 GNL3LQ9NVN8 582 aaKnown RBP10.88□□□□□ -0.67
KLHL3-209ENST00000508657 LIG1P18858 919 aa10.88□□□□□ -0.67
KLHL3-209ENST00000508657 BIN2Q9UBW5 565 aaPredicted RBP10.88□□□□□ -0.67
KLHL3-209ENST00000508657 NUP133Q8WUM0 1156 aa10.87□□□□□ -0.67
KLHL3-209ENST00000508657 MAP4K4O95819 1239 aaPredicted RBP10.87□□□□□ -0.67
KLHL3-209ENST00000508657 MTHFSP49914 203 aa10.87□□□□□ -0.67
KLHL3-209ENST00000508657 THEMISQ8N1K5 641 aaPredicted RBP10.87□□□□□ -0.67
KLHL3-209ENST00000508657 FSD1Q9BTV5 496 aa10.87□□□□□ -0.67
KLHL3-209ENST00000508657 MPRIPQ6WCQ1 1025 aa10.87□□□□□ -0.67
KLHL3-209ENST00000508657 ABCC8Q09428 1581 aa10.87□□□□□ -0.67
KLHL3-209ENST00000508657 C8orf37Q96NL8 207 aa10.87□□□□□ -0.67
KLHL3-209ENST00000508657 APAF1O14727 1248 aa10.86□□□□□ -0.67
KLHL3-209ENST00000508657 BRPF1P55201 1214 aaPredicted RBP10.86□□□□□ -0.67
KLHL3-209ENST00000508657 SSBP05455 408 aaKnown RBP eCLIP10.86□□□□□ -0.67
KLHL3-209ENST00000508657 UBTFL1P0CB47 393 aaPredicted RBP10.86□□□□□ -0.67
KLHL3-209ENST00000508657 RAI14Q9P0K7 980 aa10.86□□□□□ -0.67
KLHL3-209ENST00000508657 CRACR2BQ8N4Y2 399 aaPredicted RBP10.86□□□□□ -0.67
KLHL3-209ENST00000508657 NACADO15069 1562 aa10.85□□□□□ -0.67
KLHL3-209ENST00000508657 FKBP4Q02790 459 aaKnown RBP eCLIP10.85□□□□□ -0.67
KLHL3-209ENST00000508657 SYCP1Q15431 976 aa10.85□□□□□ -0.67
KLHL3-209ENST00000508657 SMG6Q86US8 1419 aaKnown RBP10.85□□□□□ -0.67
KLHL3-209ENST00000508657 RAPGEF3O95398 923 aa10.85□□□□□ -0.67
KLHL3-209ENST00000508657 PDILTQ8N807 584 aa10.85□□□□□ -0.67
KLHL3-209ENST00000508657 AFAP1Q8N556 730 aa10.84□□□□□ -0.67
KLHL3-209ENST00000508657 PRAM1Q96QH2 718 aa10.84□□□□□ -0.67
KLHL3-209ENST00000508657 ABCF2Q9UG63 623 aa10.84□□□□□ -0.67
KLHL3-209ENST00000508657 RBM26Q5T8P6 1007 aaKnown RBP10.84□□□□□ -0.67
KLHL3-209ENST00000508657 ZKSCAN2Q63HK3 967 aa10.84□□□□□ -0.67
KLHL3-209ENST00000508657 UACAQ9BZF9 1416 aa10.84□□□□□ -0.67
KLHL3-209ENST00000508657 SEPT11Q9NVA2 429 aaKnown RBP10.84□□□□□ -0.67
KLHL3-209ENST00000508657 CCDC18Q5T9S5 1454 aa10.84□□□□□ -0.67
KLHL3-209ENST00000508657 CEBPZQ03701 1054 aaKnown RBP10.84□□□□□ -0.67
KLHL3-209ENST00000508657 RNF20Q5VTR2 975 aa10.84□□□□□ -0.67
KLHL3-209ENST00000508657 CCDC70Q6NSX1 233 aa10.84□□□□□ -0.67
KLHL3-209ENST00000508657 ZNF530Q6P9A1 599 aaPredicted RBP10.84□□□□□ -0.67
KLHL3-209ENST00000508657 ZNF408Q9H9D4 720 aa10.84□□□□□ -0.67
KLHL3-209ENST00000508657 DHX57Q6P158 1386 aaKnown RBP10.83□□□□□ -0.68
KLHL3-209ENST00000508657 RPGRQ92834 1020 aaKnown RBP10.83□□□□□ -0.68
KLHL3-209ENST00000508657 SPG7Q9UQ90 795 aa10.83□□□□□ -0.68
KLHL3-209ENST00000508657 TNNT3P45378 269 aaPredicted RBP10.83□□□□□ -0.68
KLHL3-209ENST00000508657 ANKRD62A6NC57 917 aa10.83□□□□□ -0.68
KLHL3-209ENST00000508657 XBP1P17861 261 aa10.83□□□□□ -0.68
KLHL3-209ENST00000508657 SART3Q15020 963 aaKnown RBP10.83□□□□□ -0.68
KLHL3-209ENST00000508657 CCDC158Q5M9N0 1113 aa10.83□□□□□ -0.68
KLHL3-209ENST00000508657 DRC1Q96MC2 740 aa10.83□□□□□ -0.68
KLHL3-209ENST00000508657 TNIKQ9UKE5 1360 aa10.83□□□□□ -0.68
KLHL3-209ENST00000508657 ACSBG1Q96GR2 724 aa10.83□□□□□ -0.68
KLHL3-209ENST00000508657 CEBPAP49715 358 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms