RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 KIAA1468Q9P260 1216 aa8.03□□□□□ -1.12
SF3A3-202ENST00000460925 GAPVD1Q14C86 1478 aa8.02□□□□□ -1.13
SF3A3-202ENST00000460925 MTMR14Q8NCE2 650 aa8.02□□□□□ -1.13
SF3A3-202ENST00000460925 RABGEF1Q9UJ41 708 aa8.02□□□□□ -1.13
SF3A3-202ENST00000460925 SMAPO00193 183 aa8.01□□□□□ -1.13
SF3A3-202ENST00000460925 NDUFV2P19404 249 aa8.01□□□□□ -1.13
SF3A3-202ENST00000460925 QPCTQ16769 361 aa8.01□□□□□ -1.13
SF3A3-202ENST00000460925 CCDC82Q8N4S0 544 aa8.01□□□□□ -1.13
SF3A3-202ENST00000460925 RDH13Q8NBN7 331 aa8.01□□□□□ -1.13
SF3A3-202ENST00000460925 SNAPC4Q5SXM2 1469 aa8□□□□□ -1.13
SF3A3-202ENST00000460925 ARHGAP33O14559 1287 aa8□□□□□ -1.13
SF3A3-202ENST00000460925 PCDHB15Q9Y5E8 787 aa8□□□□□ -1.13
SF3A3-202ENST00000460925 CHD1O14646 1710 aa7.99□□□□□ -1.13
SF3A3-202ENST00000460925 HOXA2O43364 376 aa7.99□□□□□ -1.13
SF3A3-202ENST00000460925 ADAMTS12P58397 1594 aa7.99□□□□□ -1.13
SF3A3-202ENST00000460925 KIF27Q86VH2 1401 aa7.99□□□□□ -1.13
SF3A3-202ENST00000460925 OTUD5Q96G74 571 aa7.99□□□□□ -1.13
SF3A3-202ENST00000460925 ZNF777Q9ULD5 760 aaPredicted RBP7.99□□□□□ -1.13
SF3A3-202ENST00000460925 SLC10A3P09131 477 aa7.98□□□□□ -1.13
SF3A3-202ENST00000460925 PSEN2P49810 448 aa7.98□□□□□ -1.13
SF3A3-202ENST00000460925 RTL5Q5HYW3 569 aaPredicted RBP7.98□□□□□ -1.13
SF3A3-202ENST00000460925 ZBTB3Q9H5J0 574 aa7.98□□□□□ -1.13
SF3A3-202ENST00000460925 PLSCR2Q9NRY7 297 aa7.98□□□□□ -1.13
SF3A3-202ENST00000460925 SERPINA10Q9UK55 444 aa7.98□□□□□ -1.13
SF3A3-202ENST00000460925 PBX2P40425 430 aa7.97□□□□□ -1.13
SF3A3-202ENST00000460925 CSPP1Q1MSJ5 1256 aa7.97□□□□□ -1.13
SF3A3-202ENST00000460925 SWT1Q5T5J6 900 aaKnown RBP7.97□□□□□ -1.13
SF3A3-202ENST00000460925 POTEEQ6S8J3 1075 aa7.97□□□□□ -1.13
SF3A3-202ENST00000460925 PRM3Q9NNZ6 103 aa7.97□□□□□ -1.13
SF3A3-202ENST00000460925 GRIN2BQ13224 1484 aa7.97□□□□□ -1.13
SF3A3-202ENST00000460925 ERICH3Q5RHP9 1530 aa7.97□□□□□ -1.13
SF3A3-202ENST00000460925 CUL7Q14999 1698 aa7.96□□□□□ -1.13
SF3A3-202ENST00000460925 FDX1P10109 184 aa7.96□□□□□ -1.14
SF3A3-202ENST00000460925 HRCP23327 699 aa7.96□□□□□ -1.14
SF3A3-202ENST00000460925 FAM98CQ17RN3 349 aaKnown RBP7.96□□□□□ -1.14
SF3A3-202ENST00000460925 LAPTM4BQ86VI4 370 aa7.96□□□□□ -1.14
SF3A3-202ENST00000460925 NUTM2BA6NNL0 878 aaPredicted RBP7.95□□□□□ -1.14
SF3A3-202ENST00000460925 NUTM2EB1AL46 878 aaPredicted RBP7.95□□□□□ -1.14
SF3A3-202ENST00000460925 AP1G2O75843 785 aa7.95□□□□□ -1.14
SF3A3-202ENST00000460925 USP17L8P0C7I0 530 aa7.95□□□□□ -1.14
SF3A3-202ENST00000460925 HDGFP51858 240 aaKnown RBP7.95□□□□□ -1.14
SF3A3-202ENST00000460925 NUTM2DQ5VT03 806 aaPredicted RBP7.95□□□□□ -1.14
SF3A3-202ENST00000460925 NUTM2AQ8IVF1 878 aaPredicted RBP7.95□□□□□ -1.14
SF3A3-202ENST00000460925 CABLES1Q8TDN4 633 aa7.95□□□□□ -1.14
SF3A3-202ENST00000460925 GDPD2Q9HCC8 539 aa7.95□□□□□ -1.14
SF3A3-202ENST00000460925 PCDHGC3Q9UN70 934 aa7.95□□□□□ -1.14
SF3A3-202ENST00000460925 ZNF330Q9Y3S2 320 aaPredicted RBP7.95□□□□□ -1.14
SF3A3-202ENST00000460925 IGF1RP08069 1367 aa7.95□□□□□ -1.14
SF3A3-202ENST00000460925 SLC4A3P48751 1232 aa7.94□□□□□ -1.14
SF3A3-202ENST00000460925 WWC1Q8IX03 1113 aa7.94□□□□□ -1.14
SF3A3-202ENST00000460925 SLF2Q8IX21 1173 aa7.94□□□□□ -1.14
SF3A3-202ENST00000460925 ERBB3P21860 1342 aa7.94□□□□□ -1.14
SF3A3-202ENST00000460925 RAPGEF2Q9Y4G8 1499 aa7.94□□□□□ -1.14
SF3A3-202ENST00000460925 VARS2Q5ST30 1063 aaKnown RBP7.93□□□□□ -1.14
SF3A3-202ENST00000460925 DMRTA1Q5VZB9 504 aa7.93□□□□□ -1.14
SF3A3-202ENST00000460925 CCDC97Q96F63 343 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-202ENST00000460925 GJD4Q96KN9 370 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-202ENST00000460925 SEPT9Q9UHD8 586 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-202ENST00000460925 VPS9D1Q9Y2B5 631 aa7.93□□□□□ -1.14
SF3A3-202ENST00000460925 EEA1Q15075 1411 aa7.93□□□□□ -1.14
SF3A3-202ENST00000460925 MAGI1Q96QZ7 1491 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-202ENST00000460925 KIF21BO75037 1637 aa7.92□□□□□ -1.14
SF3A3-202ENST00000460925 MTMR2Q13614 643 aa7.92□□□□□ -1.14
SF3A3-202ENST00000460925 GRIPAP1Q4V328 841 aa7.92□□□□□ -1.14
SF3A3-202ENST00000460925 PRXQ9BXM0 1461 aa7.92□□□□□ -1.14
SF3A3-202ENST00000460925 BHMG1C9JSJ3 638 aaPredicted RBP7.91□□□□□ -1.14
SF3A3-202ENST00000460925 ZNF687Q8N1G0 1237 aa7.91□□□□□ -1.14
SF3A3-202ENST00000460925 TBC1D2BQ9UPU7 963 aa7.91□□□□□ -1.14
SF3A3-202ENST00000460925 CARMIL1Q5VZK9 1371 aa7.91□□□□□ -1.14
SF3A3-202ENST00000460925 CEP170Q5SW79 1584 aa7.91□□□□□ -1.14
SF3A3-202ENST00000460925 CTTNBP2Q8WZ74 1663 aa7.9□□□□□ -1.14
SF3A3-202ENST00000460925 SYNJ2O15056 1496 aa7.9□□□□□ -1.14
SF3A3-202ENST00000460925 GRIN2AQ12879 1464 aa7.9□□□□□ -1.14
SF3A3-202ENST00000460925 FHAD1B1AJZ9 1412 aa7.9□□□□□ -1.14
SF3A3-202ENST00000460925 TK2O00142 265 aa7.9□□□□□ -1.14
SF3A3-202ENST00000460925 NBPF3Q9H094 633 aa7.9□□□□□ -1.14
SF3A3-202ENST00000460925 NDUFB9Q9Y6M9 179 aa7.9□□□□□ -1.14
SF3A3-202ENST00000460925 LOC105371045A0A1W2PR82 267 aa7.89□□□□□ -1.15
SF3A3-202ENST00000460925 ABL2P42684 1182 aa7.89□□□□□ -1.15
SF3A3-202ENST00000460925 GUCA2AQ02747 115 aa7.89□□□□□ -1.15
SF3A3-202ENST00000460925 FUT2Q10981 343 aa7.89□□□□□ -1.15
SF3A3-202ENST00000460925 SAMD7Q7Z3H4 446 aa7.89□□□□□ -1.15
SF3A3-202ENST00000460925 HELBQ8NG08 1087 aaPredicted RBP7.89□□□□□ -1.15
SF3A3-202ENST00000460925 NECTIN2Q92692 538 aa7.89□□□□□ -1.15
SF3A3-202ENST00000460925 HLA-CQ95604 372 aa7.89□□□□□ -1.15
SF3A3-202ENST00000460925 AXIN2Q9Y2T1 843 aa7.89□□□□□ -1.15
SF3A3-202ENST00000460925 CFHP08603 1231 aa7.88□□□□□ -1.15
SF3A3-202ENST00000460925 ATP6V1AP38606 617 aa7.88□□□□□ -1.15
SF3A3-202ENST00000460925 CTDSPL2Q05D32 466 aa7.88□□□□□ -1.15
SF3A3-202ENST00000460925 TRIM34Q9BYJ4 488 aa7.88□□□□□ -1.15
SF3A3-202ENST00000460925 GOLGA3Q08378 1498 aa7.87□□□□□ -1.15
SF3A3-202ENST00000460925 ST18O60284 1047 aa7.87□□□□□ -1.15
SF3A3-202ENST00000460925 GPR37L1O60883 481 aa7.87□□□□□ -1.15
SF3A3-202ENST00000460925 PDIA4P13667 645 aaKnown RBP7.87□□□□□ -1.15
SF3A3-202ENST00000460925 EMP3P54852 163 aa7.87□□□□□ -1.15
SF3A3-202ENST00000460925 IRF5Q13568 498 aa7.87□□□□□ -1.15
SF3A3-202ENST00000460925 CFAP99D6REC4 459 aa7.86□□□□□ -1.15
SF3A3-202ENST00000460925 TRIM26Q12899 539 aaPredicted RBP7.86□□□□□ -1.15
SF3A3-202ENST00000460925 WASHC4Q2M389 1173 aa7.86□□□□□ -1.15
SF3A3-202ENST00000460925 CHMP7Q8WUX9 453 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms