RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 SMG6Q86US8 1419 aaKnown RBP12.43□□□□□ -0.42
SCN10A-201ENST00000449082 CFAP70Q5T0N1 1121 aa12.43□□□□□ -0.42
SCN10A-201ENST00000449082 TPM1P09493 284 aa12.43□□□□□ -0.42
SCN10A-201ENST00000449082 SKOR2Q2VWA4 1001 aaPredicted RBP12.43□□□□□ -0.42
SCN10A-201ENST00000449082 CFTRP13569 1480 aa12.42□□□□□ -0.42
SCN10A-201ENST00000449082 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
SCN10A-201ENST00000449082 BECN2A8MW95 431 aa12.42□□□□□ -0.42
SCN10A-201ENST00000449082 UBTFL1P0CB47 393 aaPredicted RBP12.42□□□□□ -0.42
SCN10A-201ENST00000449082 AAMPQ13685 434 aa12.42□□□□□ -0.42
SCN10A-201ENST00000449082 NEUROD6Q96NK8 337 aa12.42□□□□□ -0.42
SCN10A-201ENST00000449082 USP35Q9P2H5 1018 aa12.42□□□□□ -0.42
SCN10A-201ENST00000449082 INTS3Q68E01 1043 aaKnown RBP12.42□□□□□ -0.42
SCN10A-201ENST00000449082 HFM1A2PYH4 1435 aa12.42□□□□□ -0.42
SCN10A-201ENST00000449082 DDX49Q9Y6V7 483 aaKnown RBP12.42□□□□□ -0.42
SCN10A-201ENST00000449082 MTHFSP49914 203 aa12.41□□□□□ -0.42
SCN10A-201ENST00000449082 GOLGA6L1Q8N7Z2 621 aa12.41□□□□□ -0.42
SCN10A-201ENST00000449082 PRAM1Q96QH2 718 aa12.41□□□□□ -0.42
SCN10A-201ENST00000449082 CWC22Q9HCG8 908 aaKnown RBP12.41□□□□□ -0.42
SCN10A-201ENST00000449082 CCDC30Q5VVM6 783 aa12.41□□□□□ -0.42
SCN10A-201ENST00000449082 CNTLNQ9NXG0 1405 aa12.41□□□□□ -0.42
SCN10A-201ENST00000449082 EFCAB5A4FU69 1503 aa12.41□□□□□ -0.42
SCN10A-201ENST00000449082 WWC1Q8IX03 1113 aa12.4□□□□□ -0.42
SCN10A-201ENST00000449082 KIF6Q6ZMV9 814 aa12.4□□□□□ -0.42
SCN10A-201ENST00000449082 FOXD4L6Q3SYB3 417 aaPredicted RBP12.4□□□□□ -0.42
SCN10A-201ENST00000449082 FOXD4L3Q6VB84 417 aaPredicted RBP12.4□□□□□ -0.42
SCN10A-201ENST00000449082 SLC52A1Q9NWF4 448 aa12.4□□□□□ -0.42
SCN10A-201ENST00000449082 HOOK1Q9UJC3 728 aaKnown RBP12.4□□□□□ -0.42
SCN10A-201ENST00000449082 TATP17735 454 aaPredicted RBP12.39□□□□□ -0.43
SCN10A-201ENST00000449082 TSHZ2Q9NRE2 1034 aa12.39□□□□□ -0.43
SCN10A-201ENST00000449082 C9orf84Q5VXU9 1444 aa12.39□□□□□ -0.43
SCN10A-201ENST00000449082 ZNF692Q9BU19 519 aaPredicted RBP12.39□□□□□ -0.43
SCN10A-201ENST00000449082 EHBP1L1Q8N3D4 1523 aa12.39□□□□□ -0.43
SCN10A-201ENST00000449082 POGZQ7Z3K3 1410 aa12.39□□□□□ -0.43
SCN10A-201ENST00000449082 SCAPERQ9BY12 1400 aa12.39□□□□□ -0.43
SCN10A-201ENST00000449082 WASHC4Q2M389 1173 aa12.39□□□□□ -0.43
SCN10A-201ENST00000449082 RALYLQ86SE5 291 aaKnown RBP12.39□□□□□ -0.43
SCN10A-201ENST00000449082 NESP48681 1621 aa12.39□□□□□ -0.43
SCN10A-201ENST00000449082 CCDC27Q2M243 656 aa12.38□□□□□ -0.43
SCN10A-201ENST00000449082 BRD4O60885 1362 aaPredicted RBP12.38□□□□□ -0.43
SCN10A-201ENST00000449082 ANKRD20A12PQ8NF67 263 aa12.38□□□□□ -0.43
SCN10A-201ENST00000449082 STRN4Q9NRL3 753 aa12.38□□□□□ -0.43
SCN10A-201ENST00000449082 SAFBQ15424 915 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCN10A-201ENST00000449082 RBM42Q9BTD8 480 aaKnown RBP12.38□□□□□ -0.43
SCN10A-201ENST00000449082 DCAF8L1A6NGE4 600 aa12.37□□□□□ -0.43
SCN10A-201ENST00000449082 GNAI3P08754 354 aa12.37□□□□□ -0.43
SCN10A-201ENST00000449082 ANKLE2Q86XL3 938 aa12.37□□□□□ -0.43
SCN10A-201ENST00000449082 NINLQ9Y2I6 1382 aa12.37□□□□□ -0.43
SCN10A-201ENST00000449082 CC2D2AQ9P2K1 1620 aa12.37□□□□□ -0.43
SCN10A-201ENST00000449082 SNAPC4Q5SXM2 1469 aa12.37□□□□□ -0.43
SCN10A-201ENST00000449082 CCDC43Q96MW1 224 aaKnown RBP12.37□□□□□ -0.43
SCN10A-201ENST00000449082 CDK19Q9BWU1 502 aa12.37□□□□□ -0.43
SCN10A-201ENST00000449082 LNPKQ9C0E8 428 aa12.36□□□□□ -0.43
SCN10A-201ENST00000449082 SMC3Q9UQE7 1217 aa12.36□□□□□ -0.43
SCN10A-201ENST00000449082 HECW1Q76N89 1606 aa12.36□□□□□ -0.43
SCN10A-201ENST00000449082 TOPBP1Q92547 1522 aa12.36□□□□□ -0.43
SCN10A-201ENST00000449082 PRKAR2BP31323 418 aa12.36□□□□□ -0.43
SCN10A-201ENST00000449082 TROQ12816 1431 aaPredicted RBP12.36□□□□□ -0.43
SCN10A-201ENST00000449082 PCMTD1Q96MG8 357 aaPredicted RBP12.36□□□□□ -0.43
SCN10A-201ENST00000449082 TBC1D2BQ9UPU7 963 aa12.36□□□□□ -0.43
SCN10A-201ENST00000449082 FYB1O15117 783 aa12.36□□□□□ -0.43
SCN10A-201ENST00000449082 TCP11L2Q8N4U5 519 aa12.36□□□□□ -0.43
SCN10A-201ENST00000449082 ADAMTS8Q9UP79 889 aa12.35□□□□□ -0.43
SCN10A-201ENST00000449082 CNTROBQ8N137 903 aa12.35□□□□□ -0.43
SCN10A-201ENST00000449082 BICD2Q8TD16 824 aa12.35□□□□□ -0.43
SCN10A-201ENST00000449082 CLASRPQ8N2M8 674 aaKnown RBP12.35□□□□□ -0.43
SCN10A-201ENST00000449082 PPP2R1AP30153 589 aa12.34□□□□□ -0.43
SCN10A-201ENST00000449082 SF3B2Q13435 895 aaKnown RBP12.34□□□□□ -0.43
SCN10A-201ENST00000449082 KIAA1107Q9UPP5 1409 aa12.34□□□□□ -0.43
SCN10A-201ENST00000449082 RPGRIP1LQ68CZ1 1315 aa12.34□□□□□ -0.43
SCN10A-201ENST00000449082 PNISRQ8TF01 805 aaKnown RBP12.34□□□□□ -0.43
SCN10A-201ENST00000449082 TOM1L2Q6ZVM7 507 aa12.34□□□□□ -0.43
SCN10A-201ENST00000449082 BRMS1Q9HCU9 246 aa12.34□□□□□ -0.43
SCN10A-201ENST00000449082 IPO7O95373 1038 aaKnown RBP12.34□□□□□ -0.43
SCN10A-201ENST00000449082 SAMD1Q6SPF0 538 aaPredicted RBP12.34□□□□□ -0.43
SCN10A-201ENST00000449082 VPS37CA5D8V6 355 aaPredicted RBP12.33□□□□□ -0.44
SCN10A-201ENST00000449082 FAM177BA6PVY3 158 aa12.33□□□□□ -0.44
SCN10A-201ENST00000449082 SLC4A3P48751 1232 aa12.33□□□□□ -0.44
SCN10A-201ENST00000449082 CABP4P57796 275 aa12.33□□□□□ -0.44
SCN10A-201ENST00000449082 PANK1Q8TE04 598 aa12.33□□□□□ -0.44
SCN10A-201ENST00000449082 SPG7Q9UQ90 795 aa12.33□□□□□ -0.44
SCN10A-201ENST00000449082 PSMA5P28066 241 aa12.33□□□□□ -0.44
SCN10A-201ENST00000449082 RTEL1-TNFRSF6BF6WH68 1400 aa12.33□□□□□ -0.44
SCN10A-201ENST00000449082 CDC45O75419 566 aa12.33□□□□□ -0.44
SCN10A-201ENST00000449082 XBP1P17861 261 aa12.33□□□□□ -0.44
SCN10A-201ENST00000449082 FSD1Q9BTV5 496 aa12.33□□□□□ -0.44
SCN10A-201ENST00000449082 SYNJ1O43426 1573 aa12.32□□□□□ -0.44
SCN10A-201ENST00000449082 CCDC70Q6NSX1 233 aa12.32□□□□□ -0.44
SCN10A-201ENST00000449082 CABP1Q9NZU7 370 aa12.32□□□□□ -0.44
SCN10A-201ENST00000449082 ARAP1Q96P48 1450 aa12.32□□□□□ -0.44
SCN10A-201ENST00000449082 HMGXB3Q12766 1538 aa12.32□□□□□ -0.44
SCN10A-201ENST00000449082 SURF6O75683 361 aaKnown RBP12.32□□□□□ -0.44
SCN10A-201ENST00000449082 ERC1Q8IUD2 1116 aa12.32□□□□□ -0.44
SCN10A-201ENST00000449082 NUCB2P80303 420 aa12.32□□□□□ -0.44
SCN10A-201ENST00000449082 NUTM2BA6NNL0 878 aaPredicted RBP12.32□□□□□ -0.44
SCN10A-201ENST00000449082 NUTM2EB1AL46 878 aaPredicted RBP12.32□□□□□ -0.44
SCN10A-201ENST00000449082 RAPGEF3O95398 923 aa12.32□□□□□ -0.44
SCN10A-201ENST00000449082 TWISTNBQ3B726 338 aaPredicted RBP12.32□□□□□ -0.44
SCN10A-201ENST00000449082 NUTM2AQ8IVF1 878 aaPredicted RBP12.32□□□□□ -0.44
SCN10A-201ENST00000449082 CHMP5Q9NZZ3 219 aa12.32□□□□□ -0.44
SCN10A-201ENST00000449082 POLA1P09884 1462 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms