RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 RAD54L2Q9Y4B4 1467 aa11.16□□□□□ -0.62
HMGN1P6-201ENST00000438508 TRIM26Q12899 539 aaPredicted RBP11.15□□□□□ -0.62
HMGN1P6-201ENST00000438508 WDR97A6NE52 1622 aa11.15□□□□□ -0.62
HMGN1P6-201ENST00000438508 CARMIL1Q5VZK9 1371 aa11.15□□□□□ -0.63
HMGN1P6-201ENST00000438508 MRC2Q9UBG0 1479 aa11.14□□□□□ -0.63
HMGN1P6-201ENST00000438508 ACTN4O43707 911 aaKnown RBP11.14□□□□□ -0.63
HMGN1P6-201ENST00000438508 CDHR5Q9HBB8 845 aa11.13□□□□□ -0.63
HMGN1P6-201ENST00000438508 TARBP1Q13395 1621 aaKnown RBP11.11□□□□□ -0.63
HMGN1P6-201ENST00000438508 OSBPP22059 807 aa11.11□□□□□ -0.63
HMGN1P6-201ENST00000438508 RPIAP49247 311 aa11.11□□□□□ -0.63
HMGN1P6-201ENST00000438508 FOXC1Q12948 553 aa11.11□□□□□ -0.63
HMGN1P6-201ENST00000438508 CLIP1P30622 1438 aa11.1□□□□□ -0.63
HMGN1P6-201ENST00000438508 PADI6Q6TGC4 694 aa11.1□□□□□ -0.63
HMGN1P6-201ENST00000438508 SLC6A16Q9GZN6 736 aa11.1□□□□□ -0.63
HMGN1P6-201ENST00000438508 NPDC1Q9NQX5 325 aaPredicted RBP11.1□□□□□ -0.63
HMGN1P6-201ENST00000438508 ARIH1Q9Y4X5 557 aaPredicted RBP11.1□□□□□ -0.63
HMGN1P6-201ENST00000438508 WDR62O43379 1518 aa11.09□□□□□ -0.63
HMGN1P6-201ENST00000438508 ABCA5Q8WWZ7 1642 aa11.09□□□□□ -0.63
HMGN1P6-201ENST00000438508 CUL7Q14999 1698 aa11.08□□□□□ -0.64
HMGN1P6-201ENST00000438508 PCGF6Q9BYE7 350 aa11.08□□□□□ -0.64
HMGN1P6-201ENST00000438508 GRXCR2A6NFK2 248 aa11.07□□□□□ -0.64
HMGN1P6-201ENST00000438508 KMT5BQ4FZB7 885 aa11.07□□□□□ -0.64
HMGN1P6-201ENST00000438508 CYP4X1Q8N118 509 aa11.07□□□□□ -0.64
HMGN1P6-201ENST00000438508 GAPVD1Q14C86 1478 aa11.06□□□□□ -0.64
HMGN1P6-201ENST00000438508 NR1I2O75469 434 aa11.06□□□□□ -0.64
HMGN1P6-201ENST00000438508 SUZ12Q15022 739 aaKnown RBP11.06□□□□□ -0.64
HMGN1P6-201ENST00000438508 LORP23490 312 aaPredicted RBP11.05□□□□□ -0.64
HMGN1P6-201ENST00000438508 TRIM47Q96LD4 638 aa11.05□□□□□ -0.64
HMGN1P6-201ENST00000438508 TDRD9Q8NDG6 1382 aaKnown RBP11.04□□□□□ -0.64
HMGN1P6-201ENST00000438508 SENP2Q9HC62 589 aa11.04□□□□□ -0.64
HMGN1P6-201ENST00000438508 IFT140Q96RY7 1462 aa11.04□□□□□ -0.64
HMGN1P6-201ENST00000438508 VPS8Q8N3P4 1428 aa11.03□□□□□ -0.64
HMGN1P6-201ENST00000438508 CD2BP2O95400 341 aaKnown RBP11.03□□□□□ -0.64
HMGN1P6-201ENST00000438508 SNRPBP14678 240 aaKnown RBP11.03□□□□□ -0.64
HMGN1P6-201ENST00000438508 ATP13A2Q9NQ11 1180 aa11.03□□□□□ -0.64
HMGN1P6-201ENST00000438508 THOC2Q8NI27 1593 aaKnown RBP11.02□□□□□ -0.65
HMGN1P6-201ENST00000438508 ERCC6Q03468 1493 aa11.01□□□□□ -0.65
HMGN1P6-201ENST00000438508 DNAJB2P25686 324 aa11□□□□□ -0.65
HMGN1P6-201ENST00000438508 TMEM134Q9H6X4 195 aa11□□□□□ -0.65
HMGN1P6-201ENST00000438508 ZSCAN1Q8NBB4 408 aa10.99□□□□□ -0.65
HMGN1P6-201ENST00000438508 ARHGAP35Q9NRY4 1499 aa10.99□□□□□ -0.65
HMGN1P6-201ENST00000438508 PBRM1Q86U86 1689 aa10.98□□□□□ -0.65
HMGN1P6-201ENST00000438508 SCUBE3Q8IX30 993 aa10.98□□□□□ -0.65
HMGN1P6-201ENST00000438508 ARAP1Q96P48 1450 aa10.98□□□□□ -0.65
HMGN1P6-201ENST00000438508 CFHP08603 1231 aa10.97□□□□□ -0.65
HMGN1P6-201ENST00000438508 KIFC2Q96AC6 838 aa10.97□□□□□ -0.65
HMGN1P6-201ENST00000438508 AQRO60306 1485 aaKnown RBP eCLIP10.97□□□□□ -0.65
HMGN1P6-201ENST00000438508 GRIN2BQ13224 1484 aa10.97□□□□□ -0.65
HMGN1P6-201ENST00000438508 CTTNBP2Q8WZ74 1663 aa10.97□□□□□ -0.65
HMGN1P6-201ENST00000438508 FHAD1B1AJZ9 1412 aa10.96□□□□□ -0.65
HMGN1P6-201ENST00000438508 SLC16A10Q8TF71 515 aa10.95□□□□□ -0.66
HMGN1P6-201ENST00000438508 SPSB2Q99619 263 aa10.95□□□□□ -0.66
HMGN1P6-201ENST00000438508 SMPD1P17405 629 aa10.93□□□□□ -0.66
HMGN1P6-201ENST00000438508 NPAS3Q8IXF0 933 aa10.93□□□□□ -0.66
HMGN1P6-201ENST00000438508 ZNF608Q9ULD9 1512 aaPredicted RBP10.93□□□□□ -0.66
HMGN1P6-201ENST00000438508 TTC24A2A3L6 582 aaPredicted RBP10.92□□□□□ -0.66
HMGN1P6-201ENST00000438508 PPARGC1BQ86YN6 1023 aaKnown RBP10.92□□□□□ -0.66
HMGN1P6-201ENST00000438508 EFCAB5A4FU69 1503 aa10.92□□□□□ -0.66
HMGN1P6-201ENST00000438508 ADAMTS12P58397 1594 aa10.91□□□□□ -0.66
HMGN1P6-201ENST00000438508 MAP3K1Q13233 1512 aa10.91□□□□□ -0.66
HMGN1P6-201ENST00000438508 SLC10A3P09131 477 aa10.91□□□□□ -0.66
HMGN1P6-201ENST00000438508 RANGAP1P46060 587 aaPredicted RBP10.91□□□□□ -0.66
HMGN1P6-201ENST00000438508 E2F4Q16254 413 aa10.91□□□□□ -0.66
HMGN1P6-201ENST00000438508 GMPRP36959 345 aa10.9□□□□□ -0.66
HMGN1P6-201ENST00000438508 SNIP1Q8TAD8 396 aaKnown RBP10.9□□□□□ -0.66
HMGN1P6-201ENST00000438508 RBM46Q8TBY0 533 aaKnown RBP10.9□□□□□ -0.66
HMGN1P6-201ENST00000438508 NXF1Q9UBU9 619 aaKnown RBP10.89□□□□□ -0.67
HMGN1P6-201ENST00000438508 WNT7AO00755 349 aa10.88□□□□□ -0.67
HMGN1P6-201ENST00000438508 EIF4G3O43432 1585 aaKnown RBP10.88□□□□□ -0.67
HMGN1P6-201ENST00000438508 HRCP23327 699 aa10.88□□□□□ -0.67
HMGN1P6-201ENST00000438508 IRF7Q92985 503 aa10.88□□□□□ -0.67
HMGN1P6-201ENST00000438508 MAGI1Q96QZ7 1491 aaPredicted RBP10.87□□□□□ -0.67
HMGN1P6-201ENST00000438508 FCF1Q9Y324 198 aaKnown RBP10.87□□□□□ -0.67
HMGN1P6-201ENST00000438508 SAMD9Q5K651 1589 aa10.86□□□□□ -0.67
HMGN1P6-201ENST00000438508 ADGRG1Q9Y653 693 aa10.86□□□□□ -0.67
HMGN1P6-201ENST00000438508 RCCD1A6NED2 376 aa10.85□□□□□ -0.67
HMGN1P6-201ENST00000438508 KIAA0586Q9BVV6 1533 aa10.84□□□□□ -0.67
HMGN1P6-201ENST00000438508 FMN1Q68DA7 1419 aa10.84□□□□□ -0.67
HMGN1P6-201ENST00000438508 SNAPC4Q5SXM2 1469 aa10.83□□□□□ -0.68
HMGN1P6-201ENST00000438508 CASKIN1Q8WXD9 1431 aa10.83□□□□□ -0.68
HMGN1P6-201ENST00000438508 SYNJ2O15056 1496 aa10.82□□□□□ -0.68
HMGN1P6-201ENST00000438508 GRIN2AQ12879 1464 aa10.82□□□□□ -0.68
HMGN1P6-201ENST00000438508 KANK4Q5T7N3 995 aaPredicted RBP10.82□□□□□ -0.68
HMGN1P6-201ENST00000438508 THAP11Q96EK4 314 aa10.82□□□□□ -0.68
HMGN1P6-201ENST00000438508 UGGT2Q9NYU1 1516 aa10.82□□□□□ -0.68
HMGN1P6-201ENST00000438508 IQGAP2Q13576 1575 aa10.82□□□□□ -0.68
HMGN1P6-201ENST00000438508 P3H3Q8IVL6 736 aa10.8□□□□□ -0.68
HMGN1P6-201ENST00000438508 FHOD3Q2V2M9 1422 aa10.8□□□□□ -0.68
HMGN1P6-201ENST00000438508 TIAM1Q13009 1591 aa10.8□□□□□ -0.68
HMGN1P6-201ENST00000438508 FYCO1Q9BQS8 1478 aa10.8□□□□□ -0.68
HMGN1P6-201ENST00000438508 H3BM21 787 aa10.79□□□□□ -0.68
HMGN1P6-201ENST00000438508 J3QL48 77 aa10.79□□□□□ -0.68
HMGN1P6-201ENST00000438508 PTGDRQ13258 359 aa10.79□□□□□ -0.68
HMGN1P6-201ENST00000438508 PUS10Q3MIT2 529 aaKnown RBP10.79□□□□□ -0.68
HMGN1P6-201ENST00000438508 FAM160A2Q8N612 972 aaPredicted RBP10.79□□□□□ -0.68
HMGN1P6-201ENST00000438508 CHMP7Q8WUX9 453 aaPredicted RBP10.79□□□□□ -0.68
HMGN1P6-201ENST00000438508 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.78□□□□□ -0.68
HMGN1P6-201ENST00000438508 ZBTB24O43167 697 aaPredicted RBP10.78□□□□□ -0.68
HMGN1P6-201ENST00000438508 ZEB1P37275 1124 aaPredicted RBP10.78□□□□□ -0.68
HMGN1P6-201ENST00000438508 KCNMA1Q12791 1236 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms