RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 DHX16O60231 1041 aaKnown RBP8.71□□□□□ -1.01
CCDC171-201ENST00000380701 PRM3Q9NNZ6 103 aa8.71□□□□□ -1.01
CCDC171-201ENST00000380701 KCNH5Q8NCM2 988 aa8.71□□□□□ -1.01
CCDC171-201ENST00000380701 APPP05067 770 aa8.71□□□□□ -1.02
CCDC171-201ENST00000380701 ABTB2Q8N961 1025 aa8.71□□□□□ -1.02
CCDC171-201ENST00000380701 RILPL2Q969X0 211 aa8.71□□□□□ -1.02
CCDC171-201ENST00000380701 ESCO1Q5FWF5 840 aa8.71□□□□□ -1.02
CCDC171-201ENST00000380701 ANKRD45Q5TZF3 282 aa8.71□□□□□ -1.02
CCDC171-201ENST00000380701 GOLGA6L19H0YKK7 550 aa8.7□□□□□ -1.02
CCDC171-201ENST00000380701 PSMA5P28066 241 aa8.7□□□□□ -1.02
CCDC171-201ENST00000380701 INTS3Q68E01 1043 aaKnown RBP8.7□□□□□ -1.02
CCDC171-201ENST00000380701 HECW1Q76N89 1606 aa8.7□□□□□ -1.02
CCDC171-201ENST00000380701 WDHD1O75717 1129 aaPredicted RBP8.7□□□□□ -1.02
CCDC171-201ENST00000380701 ZNF428Q96B54 188 aa8.7□□□□□ -1.02
CCDC171-201ENST00000380701 A0A0U1RQG5 324 aaPredicted RBP8.7□□□□□ -1.02
CCDC171-201ENST00000380701 WWC2Q6AWC2 1192 aa8.7□□□□□ -1.02
CCDC171-201ENST00000380701 SENP3-EIF4A1A0A087X0R7 540 aa8.7□□□□□ -1.02
CCDC171-201ENST00000380701 UBTFL1P0CB47 393 aaPredicted RBP8.7□□□□□ -1.02
CCDC171-201ENST00000380701 BRD4O60885 1362 aaPredicted RBP8.69□□□□□ -1.02
CCDC171-201ENST00000380701 LRPPRCP42704 1394 aaKnown RBP8.69□□□□□ -1.02
CCDC171-201ENST00000380701 FAM161AQ3B820 660 aa8.69□□□□□ -1.02
CCDC171-201ENST00000380701 TOPBP1Q92547 1522 aa8.69□□□□□ -1.02
CCDC171-201ENST00000380701 BECN2A8MW95 431 aa8.69□□□□□ -1.02
CCDC171-201ENST00000380701 RDXP35241 583 aaKnown RBP8.69□□□□□ -1.02
CCDC171-201ENST00000380701 C9orf84Q5VXU9 1444 aa8.69□□□□□ -1.02
CCDC171-201ENST00000380701 DNMBPQ6XZF7 1577 aa8.69□□□□□ -1.02
CCDC171-201ENST00000380701 NFXL1Q6ZNB6 911 aa8.69□□□□□ -1.02
CCDC171-201ENST00000380701 ZSCAN25Q6NSZ9 544 aa8.68□□□□□ -1.02
CCDC171-201ENST00000380701 CLASRPQ8N2M8 674 aaKnown RBP8.68□□□□□ -1.02
CCDC171-201ENST00000380701 GOLGA6L3A6NEY3 463 aa8.68□□□□□ -1.02
CCDC171-201ENST00000380701 NCBP3Q53F19 620 aaKnown RBP8.68□□□□□ -1.02
CCDC171-201ENST00000380701 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.68□□□□□ -1.02
CCDC171-201ENST00000380701 LAMC3Q9Y6N6 1575 aa8.68□□□□□ -1.02
CCDC171-201ENST00000380701 FBXW7Q969H0 707 aa8.68□□□□□ -1.02
CCDC171-201ENST00000380701 PRDM2Q13029 1718 aa8.68□□□□□ -1.02
CCDC171-201ENST00000380701 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.68□□□□□ -1.02
CCDC171-201ENST00000380701 APAF1O14727 1248 aa8.67□□□□□ -1.02
CCDC171-201ENST00000380701 PDIA4P13667 645 aaKnown RBP8.67□□□□□ -1.02
CCDC171-201ENST00000380701 DHX8Q14562 1220 aaKnown RBP8.67□□□□□ -1.02
CCDC171-201ENST00000380701 CCAR1Q8IX12 1150 aaKnown RBP8.67□□□□□ -1.02
CCDC171-201ENST00000380701 PIP4K2AP48426 406 aaPredicted RBP8.67□□□□□ -1.02
CCDC171-201ENST00000380701 AFAP1Q8N556 730 aa8.67□□□□□ -1.02
CCDC171-201ENST00000380701 CNKSR2Q8WXI2 1034 aa8.67□□□□□ -1.02
CCDC171-201ENST00000380701 RTEL1-TNFRSF6BF6WH68 1400 aa8.67□□□□□ -1.02
CCDC171-201ENST00000380701 MAGI1Q96QZ7 1491 aaPredicted RBP8.67□□□□□ -1.02
CCDC171-201ENST00000380701 ANO2Q9NQ90 1003 aa8.67□□□□□ -1.02
CCDC171-201ENST00000380701 SNAPC4Q5SXM2 1469 aa8.66□□□□□ -1.02
CCDC171-201ENST00000380701 MCM2P49736 904 aa8.66□□□□□ -1.02
CCDC171-201ENST00000380701 PRDM11Q9NQV5 511 aa8.66□□□□□ -1.02
CCDC171-201ENST00000380701 RRP7AQ9Y3A4 280 aaKnown RBP8.66□□□□□ -1.02
CCDC171-201ENST00000380701 KIAA1107Q9UPP5 1409 aa8.66□□□□□ -1.02
CCDC171-201ENST00000380701 GPS2Q13227 327 aa8.66□□□□□ -1.02
CCDC171-201ENST00000380701 RRP1P56182 461 aaKnown RBP8.66□□□□□ -1.02
CCDC171-201ENST00000380701 NUCB2P80303 420 aa8.66□□□□□ -1.02
CCDC171-201ENST00000380701 CNTROBQ8N137 903 aa8.66□□□□□ -1.02
CCDC171-201ENST00000380701 NACAP1Q9BZK3 213 aa8.66□□□□□ -1.02
CCDC171-201ENST00000380701 CCDC141Q6ZP82 1450 aa8.66□□□□□ -1.02
CCDC171-201ENST00000380701 ELL2O00472 640 aaPredicted RBP8.66□□□□□ -1.02
CCDC171-201ENST00000380701 AKNAQ7Z591 1439 aa8.65□□□□□ -1.02
CCDC171-201ENST00000380701 CCT4P50991 539 aaKnown RBP8.65□□□□□ -1.02
CCDC171-201ENST00000380701 CABP4P57796 275 aa8.65□□□□□ -1.02
CCDC171-201ENST00000380701 CCDC158Q5M9N0 1113 aa8.65□□□□□ -1.02
CCDC171-201ENST00000380701 ZNF652Q9Y2D9 606 aa8.65□□□□□ -1.02
CCDC171-201ENST00000380701 TOM1L2Q6ZVM7 507 aa8.65□□□□□ -1.02
CCDC171-201ENST00000380701 PDCP20941 246 aa8.65□□□□□ -1.02
CCDC171-201ENST00000380701 RAD21O60216 631 aa8.65□□□□□ -1.03
CCDC171-201ENST00000380701 CDR1P51861 262 aa8.65□□□□□ -1.03
CCDC171-201ENST00000380701 KLHL34Q8N239 644 aa8.65□□□□□ -1.03
CCDC171-201ENST00000380701 KIF7Q2M1P5 1343 aa8.65□□□□□ -1.03
CCDC171-201ENST00000380701 CCDC73Q6ZRK6 1079 aa8.64□□□□□ -1.03
CCDC171-201ENST00000380701 EPRSP07814 1512 aaKnown RBP8.64□□□□□ -1.03
CCDC171-201ENST00000380701 PES1O00541 588 aaKnown RBP8.64□□□□□ -1.03
CCDC171-201ENST00000380701 CC2D2AQ9P2K1 1620 aa8.64□□□□□ -1.03
CCDC171-201ENST00000380701 WASHC4Q2M389 1173 aa8.64□□□□□ -1.03
CCDC171-201ENST00000380701 MCTP1Q6DN14 999 aa8.64□□□□□ -1.03
CCDC171-201ENST00000380701 IPO9Q96P70 1041 aaKnown RBP8.63□□□□□ -1.03
CCDC171-201ENST00000380701 POLA1P09884 1462 aaPredicted RBP8.63□□□□□ -1.03
CCDC171-201ENST00000380701 TXLNAP40222 546 aa8.63□□□□□ -1.03
CCDC171-201ENST00000380701 NEUROD6Q96NK8 337 aa8.63□□□□□ -1.03
CCDC171-201ENST00000380701 TMOD2Q9NZR1 351 aa8.63□□□□□ -1.03
CCDC171-201ENST00000380701 PRAM1Q96QH2 718 aa8.63□□□□□ -1.03
CCDC171-201ENST00000380701 DNAI2Q9GZS0 605 aa8.63□□□□□ -1.03
CCDC171-201ENST00000380701 CDC45O75419 566 aa8.63□□□□□ -1.03
CCDC171-201ENST00000380701 RBM42Q9BTD8 480 aaKnown RBP8.63□□□□□ -1.03
CCDC171-201ENST00000380701 ZNF287Q9HBT7 754 aa8.63□□□□□ -1.03
CCDC171-201ENST00000380701 SMC3Q9UQE7 1217 aa8.63□□□□□ -1.03
CCDC171-201ENST00000380701 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.63□□□□□ -1.03
CCDC171-201ENST00000380701 CD109Q6YHK3 1445 aa8.63□□□□□ -1.03
CCDC171-201ENST00000380701 GGNBP2Q9H3C7 697 aa8.63□□□□□ -1.03
CCDC171-201ENST00000380701 STARD3NLO95772 234 aa8.63□□□□□ -1.03
CCDC171-201ENST00000380701 SLKQ9H2G2 1235 aaPredicted RBP8.63□□□□□ -1.03
CCDC171-201ENST00000380701 CABP2Q9NPB3 220 aa8.63□□□□□ -1.03
CCDC171-201ENST00000380701 CCDC27Q2M243 656 aa8.62□□□□□ -1.03
CCDC171-201ENST00000380701 SPRYD3Q8NCJ5 442 aa8.62□□□□□ -1.03
CCDC171-201ENST00000380701 GCC1Q96CN9 775 aa8.62□□□□□ -1.03
CCDC171-201ENST00000380701 NAT10Q9H0A0 1025 aaKnown RBP8.62□□□□□ -1.03
CCDC171-201ENST00000380701 ZNF530Q6P9A1 599 aaPredicted RBP8.62□□□□□ -1.03
CCDC171-201ENST00000380701 CREBRFQ8IUR6 639 aa8.62□□□□□ -1.03
CCDC171-201ENST00000380701 HSP90AB3PQ58FF7 597 aa8.62□□□□□ -1.03
CCDC171-201ENST00000380701 SRCIN1Q9C0H9 1055 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms