RNA–Protein interactions for RNA: ENST00000368864.8

RPF2-201, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 5

Gene RPF2, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-201ENST00000368864 TOPBP1Q92547 1522 aa11.48□□□□□ -0.57
RPF2-201ENST00000368864 SYNJ1O43426 1573 aa11.47□□□□□ -0.57
RPF2-201ENST00000368864 PLEKHG3A1L390 1219 aa11.47□□□□□ -0.57
RPF2-201ENST00000368864 SKIV2LQ15477 1246 aaKnown RBP11.47□□□□□ -0.57
RPF2-201ENST00000368864 KCTD12Q96CX2 325 aaKnown RBP11.47□□□□□ -0.57
RPF2-201ENST00000368864 TOP2BQ02880 1626 aa11.46□□□□□ -0.57
RPF2-201ENST00000368864 CUX1P39880 1505 aa11.46□□□□□ -0.57
RPF2-201ENST00000368864 THSD4Q6ZMP0 1018 aa11.46□□□□□ -0.57
RPF2-201ENST00000368864 CUX2O14529 1486 aa11.45□□□□□ -0.58
RPF2-201ENST00000368864 BCAMP50895 628 aa11.45□□□□□ -0.58
RPF2-201ENST00000368864 SLC10A3P09131 477 aa11.44□□□□□ -0.58
RPF2-201ENST00000368864 CLK2P49760 499 aaKnown RBP11.44□□□□□ -0.58
RPF2-201ENST00000368864 SPIRE2Q8WWL2 714 aa11.44□□□□□ -0.58
RPF2-201ENST00000368864 MYSM1Q5VVJ2 828 aa11.43□□□□□ -0.58
RPF2-201ENST00000368864 ERICH6Q7L0X2 663 aa11.43□□□□□ -0.58
RPF2-201ENST00000368864 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
RPF2-201ENST00000368864 ACTN4O43707 911 aaKnown RBP11.42□□□□□ -0.58
RPF2-201ENST00000368864 ATP6V1AP38606 617 aa11.42□□□□□ -0.58
RPF2-201ENST00000368864 TUSC1Q2TAM9 212 aa11.41□□□□□ -0.58
RPF2-201ENST00000368864 Q3C1V9 767 aa11.41□□□□□ -0.58
RPF2-201ENST00000368864 RIC3Q7Z5B4 369 aa11.41□□□□□ -0.58
RPF2-201ENST00000368864 HOXA2O43364 376 aa11.4□□□□□ -0.58
RPF2-201ENST00000368864 POLA1P09884 1462 aaPredicted RBP11.39□□□□□ -0.59
RPF2-201ENST00000368864 SPTLC1O15269 473 aa11.39□□□□□ -0.59
RPF2-201ENST00000368864 NR1I2O75469 434 aa11.39□□□□□ -0.59
RPF2-201ENST00000368864 PCDHB3Q9Y5E6 796 aa11.39□□□□□ -0.59
RPF2-201ENST00000368864 FUT2Q10981 343 aa11.38□□□□□ -0.59
RPF2-201ENST00000368864 RSBN1LQ6PCB5 846 aaPredicted RBP11.38□□□□□ -0.59
RPF2-201ENST00000368864 POLR3EQ9NVU0 708 aa11.38□□□□□ -0.59
RPF2-201ENST00000368864 IFT140Q96RY7 1462 aa11.38□□□□□ -0.59
RPF2-201ENST00000368864 FDX1P10109 184 aa11.37□□□□□ -0.59
RPF2-201ENST00000368864 RNF166Q96A37 237 aaPredicted RBP11.37□□□□□ -0.59
RPF2-201ENST00000368864 HCSTQ9UBK5 93 aa11.37□□□□□ -0.59
RPF2-201ENST00000368864 WDR97A6NE52 1622 aa11.37□□□□□ -0.59
RPF2-201ENST00000368864 SPDYE5A6NIY4 337 aa11.36□□□□□ -0.59
RPF2-201ENST00000368864 PRPF38BQ5VTL8 546 aaKnown RBP11.36□□□□□ -0.59
RPF2-201ENST00000368864 WBP1LQ9NX94 342 aa11.36□□□□□ -0.59
RPF2-201ENST00000368864 MOXD2PA6NHM9 499 aa11.35□□□□□ -0.59
RPF2-201ENST00000368864 ZBTB3Q9H5J0 574 aa11.35□□□□□ -0.59
RPF2-201ENST00000368864 EIF4G3O43432 1585 aaKnown RBP11.34□□□□□ -0.59
RPF2-201ENST00000368864 PTPN5P54829 565 aa11.34□□□□□ -0.59
RPF2-201ENST00000368864 GTF3C3Q9Y5Q9 886 aa11.34□□□□□ -0.59
RPF2-201ENST00000368864 TARBP1Q13395 1621 aaKnown RBP11.34□□□□□ -0.59
RPF2-201ENST00000368864 SOGA1O94964 1423 aa11.34□□□□□ -0.59
RPF2-201ENST00000368864 RAD54L2Q9Y4B4 1467 aa11.33□□□□□ -0.6
RPF2-201ENST00000368864 NUTM2BA6NNL0 878 aaPredicted RBP11.33□□□□□ -0.6
RPF2-201ENST00000368864 NUTM2EB1AL46 878 aaPredicted RBP11.33□□□□□ -0.6
RPF2-201ENST00000368864 APLP1P51693 650 aa11.33□□□□□ -0.6
RPF2-201ENST00000368864 NUTM2DQ5VT03 806 aaPredicted RBP11.33□□□□□ -0.6
RPF2-201ENST00000368864 NUTM2AQ8IVF1 878 aaPredicted RBP11.33□□□□□ -0.6
RPF2-201ENST00000368864 PBRM1Q86U86 1689 aa11.32□□□□□ -0.6
RPF2-201ENST00000368864 APBB1O00213 710 aa11.31□□□□□ -0.6
RPF2-201ENST00000368864 MORN1Q5T089 497 aa11.31□□□□□ -0.6
RPF2-201ENST00000368864 C6orf229H3BNL8 230 aa11.3□□□□□ -0.6
RPF2-201ENST00000368864 MTMR2Q13614 643 aa11.3□□□□□ -0.6
RPF2-201ENST00000368864 NDUFV2P19404 249 aa11.29□□□□□ -0.6
RPF2-201ENST00000368864 CSPP1Q1MSJ5 1256 aa11.29□□□□□ -0.6
RPF2-201ENST00000368864 HELBQ8NG08 1087 aaPredicted RBP11.29□□□□□ -0.6
RPF2-201ENST00000368864 LIMD1Q9UGP4 676 aa11.29□□□□□ -0.6
RPF2-201ENST00000368864 SALL2Q9Y467 1007 aaPredicted RBP11.29□□□□□ -0.6
RPF2-201ENST00000368864 ABCA10Q8WWZ4 1543 aa11.29□□□□□ -0.6
RPF2-201ENST00000368864 FMNL1O95466 1100 aaPredicted RBP11.28□□□□□ -0.6
RPF2-201ENST00000368864 FLIIQ13045 1269 aa11.28□□□□□ -0.6
RPF2-201ENST00000368864 TMEM259Q4ZIN3 620 aa11.28□□□□□ -0.6
RPF2-201ENST00000368864 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
RPF2-201ENST00000368864 ABCA5Q8WWZ7 1642 aa11.27□□□□□ -0.6
RPF2-201ENST00000368864 IL21Q9HBE4 155 aa11.27□□□□□ -0.61
RPF2-201ENST00000368864 ZNF608Q9ULD9 1512 aaPredicted RBP11.26□□□□□ -0.61
RPF2-201ENST00000368864 PPP2R2DQ66LE6 453 aa11.26□□□□□ -0.61
RPF2-201ENST00000368864 RETREG3Q86VR2 466 aa11.26□□□□□ -0.61
RPF2-201ENST00000368864 PROCA1Q8NCQ7 364 aaPredicted RBP11.26□□□□□ -0.61
RPF2-201ENST00000368864 LILRB3O75022 631 aa11.25□□□□□ -0.61
RPF2-201ENST00000368864 PUS10Q3MIT2 529 aaKnown RBP11.25□□□□□ -0.61
RPF2-201ENST00000368864 BLOC1S3Q6QNY0 202 aa11.25□□□□□ -0.61
RPF2-201ENST00000368864 SLC27A5Q9Y2P5 690 aa11.25□□□□□ -0.61
RPF2-201ENST00000368864 KIF27Q86VH2 1401 aa11.25□□□□□ -0.61
RPF2-201ENST00000368864 TDRD9Q8NDG6 1382 aaKnown RBP11.24□□□□□ -0.61
RPF2-201ENST00000368864 GAPVD1Q14C86 1478 aa11.24□□□□□ -0.61
RPF2-201ENST00000368864 BANK1Q8NDB2 785 aa11.23□□□□□ -0.61
RPF2-201ENST00000368864 PRM3Q9NNZ6 103 aa11.23□□□□□ -0.61
RPF2-201ENST00000368864 AQRO60306 1485 aaKnown RBP eCLIP11.22□□□□□ -0.614e-7■■■■■ 35.4
RPF2-201ENST00000368864 HRCP23327 699 aa11.22□□□□□ -0.61
RPF2-201ENST00000368864 RFC5P40937 340 aa11.22□□□□□ -0.61
RPF2-201ENST00000368864 COPS2P61201 443 aa11.22□□□□□ -0.61
RPF2-201ENST00000368864 SCUBE3Q8IX30 993 aa11.22□□□□□ -0.61
RPF2-201ENST00000368864 MTRQ99707 1265 aa11.22□□□□□ -0.61
RPF2-201ENST00000368864 USB1Q9BQ65 265 aaKnown RBP11.22□□□□□ -0.61
RPF2-201ENST00000368864 CUL7Q14999 1698 aa11.21□□□□□ -0.61
RPF2-201ENST00000368864 GRIN2BQ13224 1484 aa11.21□□□□□ -0.61
RPF2-201ENST00000368864 GUCA2AQ02747 115 aa11.21□□□□□ -0.61
RPF2-201ENST00000368864 PCDHGC3Q9UN70 934 aa11.21□□□□□ -0.61
RPF2-201ENST00000368864 ZPR1O75312 459 aa11.2□□□□□ -0.62
RPF2-201ENST00000368864 PCDHB15Q9Y5E8 787 aa11.2□□□□□ -0.62
RPF2-201ENST00000368864 SNAPC4Q5SXM2 1469 aa11.19□□□□□ -0.62
RPF2-201ENST00000368864 ADH1BP00325 375 aa11.19□□□□□ -0.62
RPF2-201ENST00000368864 QPCTQ16769 361 aa11.19□□□□□ -0.62
RPF2-201ENST00000368864 DESI1Q6ICB0 168 aa11.19□□□□□ -0.62
RPF2-201ENST00000368864 PNMA1Q8ND90 353 aa11.19□□□□□ -0.62
RPF2-201ENST00000368864 TSC1Q92574 1164 aa11.19□□□□□ -0.62
RPF2-201ENST00000368864 HLA-CQ95604 372 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms