RNA–Protein interactions for RNA: ENSMUST00000190050.1

Gm28539-201, Transcript of Predicted gene 28539, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Gm28539, Length 2,982 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28539-201ENSMUST00000190050 Dip2bQ3UH60 1574 aa18.48■□□□□ 0.55
Gm28539-201ENSMUST00000190050 Abca14E9Q8F8 1683 aa18.47■□□□□ 0.55
Gm28539-201ENSMUST00000190050 Q9D9H8 365 aa18.47■□□□□ 0.55
Gm28539-201ENSMUST00000190050 Nwd1A6H603 1563 aa18.46■□□□□ 0.55
Gm28539-201ENSMUST00000190050 Slit3Q9WVB4 1523 aa18.46■□□□□ 0.55
Gm28539-201ENSMUST00000190050 Mak16Q8BGS0 296 aaKnown RBP18.46■□□□□ 0.55
Gm28539-201ENSMUST00000190050 Dcaf11Q91VU6 549 aa18.45■□□□□ 0.54
Gm28539-201ENSMUST00000190050 Ofd1Q80Z25 1017 aa18.44■□□□□ 0.54
Gm28539-201ENSMUST00000190050 Stk26Q99JT2 416 aa18.44■□□□□ 0.54
Gm28539-201ENSMUST00000190050 Adgrl1Q80TR1 1466 aa18.42■□□□□ 0.54
Gm28539-201ENSMUST00000190050 Aplp2Q06335 707 aa18.42■□□□□ 0.54
Gm28539-201ENSMUST00000190050 Atp1b4Q99ME6 356 aa18.42■□□□□ 0.54
Gm28539-201ENSMUST00000190050 Bcl9Q9D219 1425 aa18.41■□□□□ 0.54
Gm28539-201ENSMUST00000190050 Utp14aQ640M1 767 aaKnown RBP18.4■□□□□ 0.54
Gm28539-201ENSMUST00000190050 Lmtk3Q5XJV6 1424 aa18.4■□□□□ 0.54
Gm28539-201ENSMUST00000190050 Arap3Q8R5G7 1538 aa18.4■□□□□ 0.54
Gm28539-201ENSMUST00000190050 Scaf11E9PZM7 1456 aaKnown RBP18.39■□□□□ 0.54
Gm28539-201ENSMUST00000190050 IghaA0A0A6YXW6 389 aa18.39■□□□□ 0.53
Gm28539-201ENSMUST00000190050 Cps1Q8C196 1500 aa18.39■□□□□ 0.53
Gm28539-201ENSMUST00000190050 Gsto1O09131 240 aa18.38■□□□□ 0.53
Gm28539-201ENSMUST00000190050 Cnga1P29974 684 aa18.38■□□□□ 0.53
Gm28539-201ENSMUST00000190050 Psme1P97371 249 aa18.37■□□□□ 0.53
Gm28539-201ENSMUST00000190050 Atp2b2Q9R0K7 1198 aa18.37■□□□□ 0.53
Gm28539-201ENSMUST00000190050 Zfp444Q3TDV8 331 aaKnown RBP18.36■□□□□ 0.53
Gm28539-201ENSMUST00000190050 Pik3r4Q8VD65 1358 aa18.36■□□□□ 0.53
Gm28539-201ENSMUST00000190050 Mink1Q9JM52 1308 aa18.36■□□□□ 0.53
Gm28539-201ENSMUST00000190050 Kank1E9Q238 1360 aa18.36■□□□□ 0.53
Gm28539-201ENSMUST00000190050 Dnajc5P60904 198 aa18.36■□□□□ 0.53
Gm28539-201ENSMUST00000190050 P3h3Q8CG70 732 aa18.36■□□□□ 0.53
Gm28539-201ENSMUST00000190050 Txndc2Q6P902 515 aa18.35■□□□□ 0.53
Gm28539-201ENSMUST00000190050 Cdk19Q8BWD8 501 aa18.35■□□□□ 0.53
Gm28539-201ENSMUST00000190050 Asxl2Q8BZ32 1370 aa18.34■□□□□ 0.53
Gm28539-201ENSMUST00000190050 Safb2Q80YR5 991 aaKnown RBP18.34■□□□□ 0.53
Gm28539-201ENSMUST00000190050 Kiaa1107Q80TK0 1369 aa18.34■□□□□ 0.53
Gm28539-201ENSMUST00000190050 Exosc9Q9JHI7 438 aaKnown RBP18.33■□□□□ 0.53
Gm28539-201ENSMUST00000190050 IbtkQ6ZPR6 1352 aaKnown RBP18.33■□□□□ 0.53
Gm28539-201ENSMUST00000190050 Esx1O88933 382 aa18.33■□□□□ 0.52
Gm28539-201ENSMUST00000190050 Calr4Q3TQS0 420 aa18.33■□□□□ 0.52
Gm28539-201ENSMUST00000190050 FanciQ8K368 1330 aa18.33■□□□□ 0.52
Gm28539-201ENSMUST00000190050 Usp32F8VPZ3 1604 aa18.32■□□□□ 0.52
Gm28539-201ENSMUST00000190050 Pcdh10E9PXQ7 1057 aa18.32■□□□□ 0.52
Gm28539-201ENSMUST00000190050 Cald1E9QA15 768 aaKnown RBP18.32■□□□□ 0.52
Gm28539-201ENSMUST00000190050 L3mbtl2P59178 703 aa18.32■□□□□ 0.52
Gm28539-201ENSMUST00000190050 PzpQ61838 1495 aa18.32■□□□□ 0.52
Gm28539-201ENSMUST00000190050 Ttc41Q692V3 1318 aa18.31■□□□□ 0.52
Gm28539-201ENSMUST00000190050 4930407I10RikD3Z5T8 1512 aa18.3■□□□□ 0.52
Gm28539-201ENSMUST00000190050 Usp19Q3UJD6 1360 aa18.3■□□□□ 0.52
Gm28539-201ENSMUST00000190050 1700123L14RikQ3V2K7 440 aa18.29■□□□□ 0.52
Gm28539-201ENSMUST00000190050 Zranb1Q7M760 708 aa18.28■□□□□ 0.52
Gm28539-201ENSMUST00000190050 P2rx7Q9Z1M0 595 aa18.28■□□□□ 0.52
Gm28539-201ENSMUST00000190050 Eif5bQ05D44 1216 aaKnown RBP18.27■□□□□ 0.52
Gm28539-201ENSMUST00000190050 Sirt1Q923E4 737 aa18.27■□□□□ 0.51
Gm28539-201ENSMUST00000190050 PtpruB1AUH1 1446 aa18.26■□□□□ 0.51
Gm28539-201ENSMUST00000190050 Pik3c2bE9QAN8 1632 aa18.26■□□□□ 0.51
Gm28539-201ENSMUST00000190050 Nlrp6Q91WS2 869 aa18.26■□□□□ 0.51
Gm28539-201ENSMUST00000190050 Map3k19E9Q3S4 1311 aa18.26■□□□□ 0.51
Gm28539-201ENSMUST00000190050 Erbb3Q61526 1339 aa18.26■□□□□ 0.51
Gm28539-201ENSMUST00000190050 Map4k4P97820 1233 aaKnown RBP18.26■□□□□ 0.51
Gm28539-201ENSMUST00000190050 Kif16bB1AVY7 1312 aa18.24■□□□□ 0.51
Gm28539-201ENSMUST00000190050 NinlQ6ZQ12 1394 aa18.24■□□□□ 0.51
Gm28539-201ENSMUST00000190050 Upf2A2AT37 1269 aaKnown RBP18.24■□□□□ 0.51
Gm28539-201ENSMUST00000190050 SafbD3YXK2 937 aaKnown RBP18.23■□□□□ 0.51
Gm28539-201ENSMUST00000190050 Uspl1Q3ULM6 1089 aa18.22■□□□□ 0.51
Gm28539-201ENSMUST00000190050 Idi2Q8BFZ6 227 aa18.22■□□□□ 0.51
Gm28539-201ENSMUST00000190050 Tnrc6bQ8BKI2 1810 aaKnown RBP18.22■□□□□ 0.51
Gm28539-201ENSMUST00000190050 Plppr3Q7TPB0 716 aa18.21■□□□□ 0.51
Gm28539-201ENSMUST00000190050 Ncbp3Q8BZR9 615 aaKnown RBP18.21■□□□□ 0.51
Gm28539-201ENSMUST00000190050 Iqsec2Q5DU25 1478 aa18.21■□□□□ 0.51
Gm28539-201ENSMUST00000190050 GsdmaQ9EST1 446 aa18.2■□□□□ 0.5
Gm28539-201ENSMUST00000190050 GphnQ8BUV3 769 aaKnown RBP18.19■□□□□ 0.5
Gm28539-201ENSMUST00000190050 Golga2Q921M4 999 aa18.19■□□□□ 0.5
Gm28539-201ENSMUST00000190050 N4bp2F8VQG7 1678 aaKnown RBP18.18■□□□□ 0.5
Gm28539-201ENSMUST00000190050 Alpk3Q924C5 1678 aa18.18■□□□□ 0.5
Gm28539-201ENSMUST00000190050 CrbnQ8C7D2 445 aa18.18■□□□□ 0.5
Gm28539-201ENSMUST00000190050 HnrnpmQ9D0E1 729 aaKnown RBP18.17■□□□□ 0.5
Gm28539-201ENSMUST00000190050 Rreb1Q3UH06 1700 aaKnown RBP18.17■□□□□ 0.5
Gm28539-201ENSMUST00000190050 D430041D05RikF6ZGR6 1678 aa18.17■□□□□ 0.5
Gm28539-201ENSMUST00000190050 Kif1aP33173 1695 aa18.17■□□□□ 0.5
Gm28539-201ENSMUST00000190050 Rims2Q9EQZ7 1530 aa18.17■□□□□ 0.5
Gm28539-201ENSMUST00000190050 Topaz1E5FYH1 1653 aa18.16■□□□□ 0.5
Gm28539-201ENSMUST00000190050 Znf541Q0GGX2 1363 aa18.16■□□□□ 0.5
Gm28539-201ENSMUST00000190050 Prdm10Q3UTQ7 1184 aa18.15■□□□□ 0.5
Gm28539-201ENSMUST00000190050 Rad21Q61550 635 aaKnown RBP18.15■□□□□ 0.5
Gm28539-201ENSMUST00000190050 Trim28Q62318 834 aa18.14■□□□□ 0.49
Gm28539-201ENSMUST00000190050 Ralbp1Q62172 648 aa18.14■□□□□ 0.49
Gm28539-201ENSMUST00000190050 Als2Q920R0 1651 aa18.13■□□□□ 0.49
Gm28539-201ENSMUST00000190050 Znf335A2A5K6 1337 aa18.13■□□□□ 0.49
Gm28539-201ENSMUST00000190050 CatipB9EKE5 520 aa18.13■□□□□ 0.49
Gm28539-201ENSMUST00000190050 Kif20bQ80WE4 1774 aaKnown RBP18.13■□□□□ 0.49
Gm28539-201ENSMUST00000190050 C5P06684 1680 aa18.12■□□□□ 0.49
Gm28539-201ENSMUST00000190050 Q3UJC8 639 aa18.12■□□□□ 0.49
Gm28539-201ENSMUST00000190050 Mon2Q80TL7 1715 aa18.11■□□□□ 0.49
Gm28539-201ENSMUST00000190050 Plekhh1Q80TI1 1356 aa18.11■□□□□ 0.49
Gm28539-201ENSMUST00000190050 Mdc1Q5PSV9 1707 aa18.1■□□□□ 0.49
Gm28539-201ENSMUST00000190050 Speer4f1Q9D5Q6 258 aa18.1■□□□□ 0.49
Gm28539-201ENSMUST00000190050 Ccdc30Q8BVF4 654 aa18.09■□□□□ 0.49
Gm28539-201ENSMUST00000190050 Hoxb7P09024 217 aa18.09■□□□□ 0.49
Gm28539-201ENSMUST00000190050 Rimbp3Q3V0F0 1606 aa18.08■□□□□ 0.49
Gm28539-201ENSMUST00000190050 Tsen2Q6P7W5 460 aa18.08■□□□□ 0.49
Gm28539-201ENSMUST00000190050 Fam135bQ9DAI6 1403 aa18.08■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms