RNA–Protein interactions for RNA: ENSMUST00000173722.7

Lig3-211, Transcript of DNA ligase 3, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Lig3, Length 5,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-211ENSMUST00000173722 Nsd2Q8BVE8 1365 aa10.93□□□□□ -0.66
Lig3-211ENSMUST00000173722 Fhad1A6PWD2 1420 aa10.92□□□□□ -0.66
Lig3-211ENSMUST00000173722 Tcerg1Q8CGF7 1100 aaKnown RBP10.92□□□□□ -0.66
Lig3-211ENSMUST00000173722 Rundc1Q0VDN7 615 aa10.92□□□□□ -0.66
Lig3-211ENSMUST00000173722 Def6Q8C2K1 630 aa10.92□□□□□ -0.66
Lig3-211ENSMUST00000173722 Chmp7Q8R1T1 451 aa10.92□□□□□ -0.66
Lig3-211ENSMUST00000173722 Pbrm1Q8BSQ9 1634 aaKnown RBP10.92□□□□□ -0.66
Lig3-211ENSMUST00000173722 Wdr7Q920I9 1489 aa10.92□□□□□ -0.66
Lig3-211ENSMUST00000173722 Ddx23D3Z0M9 819 aaKnown RBP10.92□□□□□ -0.66
Lig3-211ENSMUST00000173722 GphnQ8BUV3 769 aaKnown RBP10.92□□□□□ -0.66
Lig3-211ENSMUST00000173722 Kcnj4P52189 445 aa10.91□□□□□ -0.66
Lig3-211ENSMUST00000173722 NexmifQ5DTT1 1515 aa10.91□□□□□ -0.66
Lig3-211ENSMUST00000173722 Chmp5Q9D7S9 219 aa10.91□□□□□ -0.66
Lig3-211ENSMUST00000173722 IkQ9Z1M8 557 aaKnown RBP10.91□□□□□ -0.66
Lig3-211ENSMUST00000173722 Smc2Q8CG48 1191 aaKnown RBP10.91□□□□□ -0.66
Lig3-211ENSMUST00000173722 Zfp644E9QA22 1323 aa10.91□□□□□ -0.66
Lig3-211ENSMUST00000173722 NaspQ99MD9 773 aaKnown RBP10.9□□□□□ -0.66
Lig3-211ENSMUST00000173722 Erich4Q3UNU4 136 aa10.9□□□□□ -0.66
Lig3-211ENSMUST00000173722 L1td1Q587J6 782 aaKnown RBP10.9□□□□□ -0.66
Lig3-211ENSMUST00000173722 Lrrc45Q8CIM1 670 aa10.9□□□□□ -0.66
Lig3-211ENSMUST00000173722 Rbm19Q8R3C6 952 aaKnown RBP10.9□□□□□ -0.66
Lig3-211ENSMUST00000173722 Plagl1Q9JLQ4 704 aa10.9□□□□□ -0.66
Lig3-211ENSMUST00000173722 Pcf11G3X9Z4 1553 aa10.9□□□□□ -0.66
Lig3-211ENSMUST00000173722 Ipo4Q8VI75 1082 aa10.89□□□□□ -0.67
Lig3-211ENSMUST00000173722 Cabp4Q8VHC5 271 aa10.89□□□□□ -0.67
Lig3-211ENSMUST00000173722 Sytl4Q9R0Q1 673 aa10.89□□□□□ -0.67
Lig3-211ENSMUST00000173722 Ipo9Q91YE6 1041 aa10.88□□□□□ -0.67
Lig3-211ENSMUST00000173722 Dnai1Q8C0M8 701 aa10.88□□□□□ -0.67
Lig3-211ENSMUST00000173722 Atf3Q60765 181 aa10.88□□□□□ -0.67
Lig3-211ENSMUST00000173722 Mlh3A0A1Y7VMP7 1443 aa10.88□□□□□ -0.67
Lig3-211ENSMUST00000173722 Evi5lH3BKQ3 813 aa10.88□□□□□ -0.67
Lig3-211ENSMUST00000173722 Themis2Q91YX0 663 aa10.88□□□□□ -0.67
Lig3-211ENSMUST00000173722 Q9D9H8 365 aa10.88□□□□□ -0.67
Lig3-211ENSMUST00000173722 St18Q80TY4 1045 aa10.87□□□□□ -0.67
Lig3-211ENSMUST00000173722 Arhgef12Q8R4H2 1543 aaKnown RBP10.87□□□□□ -0.67
Lig3-211ENSMUST00000173722 Ankrd26Q811D2 1581 aa10.86□□□□□ -0.67
Lig3-211ENSMUST00000173722 Ncoa3O09000 1398 aa10.86□□□□□ -0.67
Lig3-211ENSMUST00000173722 Tmc1Q8R4P5 757 aa10.86□□□□□ -0.67
Lig3-211ENSMUST00000173722 SlkO54988 1233 aa10.86□□□□□ -0.67
Lig3-211ENSMUST00000173722 GlmnQ8BZM1 596 aa10.86□□□□□ -0.67
Lig3-211ENSMUST00000173722 Stk31Q99MW1 1018 aa10.86□□□□□ -0.67
Lig3-211ENSMUST00000173722 Srcin1Q9QWI6 1250 aa10.86□□□□□ -0.67
Lig3-211ENSMUST00000173722 Tiam1Q60610 1591 aa10.86□□□□□ -0.67
Lig3-211ENSMUST00000173722 Ccdc146E9Q9F7 977 aa10.86□□□□□ -0.67
Lig3-211ENSMUST00000173722 Gtf2f1Q3THK3 508 aaKnown RBP10.86□□□□□ -0.67
Lig3-211ENSMUST00000173722 Erlin2Q8BFZ9 340 aa10.86□□□□□ -0.67
Lig3-211ENSMUST00000173722 Samd1D3YXK1 519 aa10.85□□□□□ -0.67
Lig3-211ENSMUST00000173722 Bicd2Q921C5 820 aa10.85□□□□□ -0.67
Lig3-211ENSMUST00000173722 Golga2Q921M4 999 aa10.85□□□□□ -0.67
Lig3-211ENSMUST00000173722 AI481877A2ALV5 1481 aa10.85□□□□□ -0.67
Lig3-211ENSMUST00000173722 Ca8P28651 291 aa10.85□□□□□ -0.67
Lig3-211ENSMUST00000173722 Homer1Q9Z2Y3 366 aa10.85□□□□□ -0.67
Lig3-211ENSMUST00000173722 Gbp4Q61107 620 aa10.85□□□□□ -0.67
Lig3-211ENSMUST00000173722 Ddrgk1Q80WW9 315 aa10.85□□□□□ -0.67
Lig3-211ENSMUST00000173722 EspnQ9ET47 871 aa10.85□□□□□ -0.67
Lig3-211ENSMUST00000173722 BcanQ61361 883 aa10.84□□□□□ -0.67
Lig3-211ENSMUST00000173722 VgfQ0VGU4 617 aa10.84□□□□□ -0.67
Lig3-211ENSMUST00000173722 Eif2s2Q99L45 331 aaKnown RBP10.84□□□□□ -0.67
Lig3-211ENSMUST00000173722 Mink1Q9JM52 1308 aa10.84□□□□□ -0.67
Lig3-211ENSMUST00000173722 Cd109Q8R422 1442 aa10.84□□□□□ -0.67
Lig3-211ENSMUST00000173722 Cgnl1Q6AW69 1298 aa10.84□□□□□ -0.67
Lig3-211ENSMUST00000173722 Polr3gQ6NXY9 223 aa10.84□□□□□ -0.67
Lig3-211ENSMUST00000173722 Filip1lQ6P6L0 1131 aa10.84□□□□□ -0.67
Lig3-211ENSMUST00000173722 NexnQ7TPW1 607 aa10.84□□□□□ -0.67
Lig3-211ENSMUST00000173722 Taf3Q5HZG4 932 aa10.84□□□□□ -0.67
Lig3-211ENSMUST00000173722 Tmf1B9EKI3 1091 aa10.84□□□□□ -0.67
Lig3-211ENSMUST00000173722 Abl1P00520 1123 aa10.83□□□□□ -0.68
Lig3-211ENSMUST00000173722 Me1P06801 572 aa10.83□□□□□ -0.68
Lig3-211ENSMUST00000173722 Cbx1P83917 185 aaKnown RBP10.83□□□□□ -0.68
Lig3-211ENSMUST00000173722 IbspQ61711 324 aa10.83□□□□□ -0.68
Lig3-211ENSMUST00000173722 Rab11fip3Q8CHD8 1047 aa10.83□□□□□ -0.68
Lig3-211ENSMUST00000173722 SlmapQ3URD3 845 aa10.83□□□□□ -0.68
Lig3-211ENSMUST00000173722 Rnf20Q5DTM8 973 aa10.83□□□□□ -0.68
Lig3-211ENSMUST00000173722 Rbm28Q8CGC6 750 aaKnown RBP10.83□□□□□ -0.68
Lig3-211ENSMUST00000173722 StambpQ9CQ26 424 aa10.83□□□□□ -0.68
Lig3-211ENSMUST00000173722 Mapkbp1Q6NS57 1503 aa10.83□□□□□ -0.68
Lig3-211ENSMUST00000173722 Anp32eP97822 260 aaKnown RBP10.83□□□□□ -0.68
Lig3-211ENSMUST00000173722 Sirt1Q923E4 737 aa10.83□□□□□ -0.68
Lig3-211ENSMUST00000173722 Caskin1Q6P9K8 1431 aa10.83□□□□□ -0.68
Lig3-211ENSMUST00000173722 Cep170Q6A065 1588 aa10.83□□□□□ -0.68
Lig3-211ENSMUST00000173722 CenpjQ569L8 1344 aa10.83□□□□□ -0.68
Lig3-211ENSMUST00000173722 Dcaf11Q91VU6 549 aa10.83□□□□□ -0.68
Lig3-211ENSMUST00000173722 Frat2Q8K025 231 aa10.82□□□□□ -0.68
Lig3-211ENSMUST00000173722 Nol7Q9D7Z3 254 aaKnown RBP10.82□□□□□ -0.68
Lig3-211ENSMUST00000173722 Sept6Q9R1T4 434 aa10.82□□□□□ -0.68
Lig3-211ENSMUST00000173722 Noc2lQ9WV70 747 aaKnown RBP10.82□□□□□ -0.68
Lig3-211ENSMUST00000173722 Il16O54824 1322 aa10.82□□□□□ -0.68
Lig3-211ENSMUST00000173722 Rapgef6Q5NCJ1 1609 aa10.82□□□□□ -0.68
Lig3-211ENSMUST00000173722 Mex3cQ05A36 652 aaKnown RBP10.82□□□□□ -0.68
Lig3-211ENSMUST00000173722 Psmd1Q3TXS7 953 aa10.82□□□□□ -0.68
Lig3-211ENSMUST00000173722 Usp40Q8BWR4 1235 aa10.82□□□□□ -0.68
Lig3-211ENSMUST00000173722 Q8C5K5 320 aa10.82□□□□□ -0.68
Lig3-211ENSMUST00000173722 Lrrfip2Q91WK0 415 aa10.82□□□□□ -0.68
Lig3-211ENSMUST00000173722 Tceal9Q9DD24 104 aa10.82□□□□□ -0.68
Lig3-211ENSMUST00000173722 Usp47Q8BY87 1376 aa10.82□□□□□ -0.68
Lig3-211ENSMUST00000173722 Ipo8Q7TMY7 1010 aa10.82□□□□□ -0.68
Lig3-211ENSMUST00000173722 PhaxQ9JJT9 385 aaKnown RBP10.82□□□□□ -0.68
Lig3-211ENSMUST00000173722 Neurod6P48986 337 aa10.81□□□□□ -0.68
Lig3-211ENSMUST00000173722 Arid3aQ62431 601 aa10.81□□□□□ -0.68
Lig3-211ENSMUST00000173722 Rock2P70336 1388 aa10.81□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms