RNA–Protein interactions for RNA: ENSMUST00000173722.7

Lig3-211, Transcript of DNA ligase 3, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Lig3, Length 5,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-211ENSMUST00000173722 Rhox8Q6VSS7 320 aa15.53■□□□□ 0.08
Lig3-211ENSMUST00000173722 NischQ80TM9 1593 aa14.86□□□□□ -0.03
Lig3-211ENSMUST00000173722 Pelp1Q9DBD5 1123 aaKnown RBP14.53□□□□□ -0.08
Lig3-211ENSMUST00000173722 Cngb1E1AZ71 1325 aa14.44□□□□□ -0.1
Lig3-211ENSMUST00000173722 Ube2uB1AUC4 352 aa14.35□□□□□ -0.11
Lig3-211ENSMUST00000173722 Abcc9P70170 1546 aa14.29□□□□□ -0.12
Lig3-211ENSMUST00000173722 Rpgrip1Q9EPQ2 1331 aa14.21□□□□□ -0.13
Lig3-211ENSMUST00000173722 Amer1Q7TS75 1132 aa14.05□□□□□ -0.16
Lig3-211ENSMUST00000173722 Wdr66E9Q743 1299 aa14.02□□□□□ -0.17
Lig3-211ENSMUST00000173722 Las1lA2BE28 776 aaKnown RBP14□□□□□ -0.17
Lig3-211ENSMUST00000173722 Zeb1Q64318 1117 aa13.98□□□□□ -0.17
Lig3-211ENSMUST00000173722 Gm35339A0A140LHH9 1649 aa13.95□□□□□ -0.18
Lig3-211ENSMUST00000173722 4930567H17RikQ3V0K5 233 aa13.92□□□□□ -0.18
Lig3-211ENSMUST00000173722 Abcc8B2RUS7 1588 aa13.89□□□□□ -0.19
Lig3-211ENSMUST00000173722 Esf1Q3V1V3 845 aaKnown RBP13.85□□□□□ -0.19
Lig3-211ENSMUST00000173722 Ccdc136Q3TVA9 1136 aa13.83□□□□□ -0.2
Lig3-211ENSMUST00000173722 Ehmt2Q9Z148 1263 aaKnown RBP13.79□□□□□ -0.2
Lig3-211ENSMUST00000173722 Npm2Q80W85 207 aa13.66□□□□□ -0.22
Lig3-211ENSMUST00000173722 Trim41Q5NCC3 630 aa13.5□□□□□ -0.25
Lig3-211ENSMUST00000173722 Zcchc6Q5BLK4 1491 aaKnown RBP13.45□□□□□ -0.26
Lig3-211ENSMUST00000173722 Myt1lP97500 1187 aa13.43□□□□□ -0.26
Lig3-211ENSMUST00000173722 Gab3Q8BSM5 595 aa13.42□□□□□ -0.26
Lig3-211ENSMUST00000173722 Slc24a1Q91WD8 1130 aa13.37□□□□□ -0.27
Lig3-211ENSMUST00000173722 Stra8P70278 393 aa13.29□□□□□ -0.28
Lig3-211ENSMUST00000173722 CenpbP27790 599 aa13.25□□□□□ -0.29
Lig3-211ENSMUST00000173722 4933416C03RikQ3V063 378 aa13.22□□□□□ -0.29
Lig3-211ENSMUST00000173722 NacadQ5SWP3 1504 aa13.22□□□□□ -0.29
Lig3-211ENSMUST00000173722 Os9Q8K2C7 672 aa13.2□□□□□ -0.3
Lig3-211ENSMUST00000173722 Il27Q8K3I6 234 aa13.2□□□□□ -0.3
Lig3-211ENSMUST00000173722 Anp32bQ9EST5 272 aaKnown RBP13.17□□□□□ -0.3
Lig3-211ENSMUST00000173722 Ttbk1Q6PCN3 1308 aa13.17□□□□□ -0.3
Lig3-211ENSMUST00000173722 NeflP08551 543 aa13.07□□□□□ -0.32
Lig3-211ENSMUST00000173722 Rb1cc1Q9ESK9 1588 aa13.02□□□□□ -0.33
Lig3-211ENSMUST00000173722 Acin1Q9JIX8 1338 aaKnown RBP13.01□□□□□ -0.33
Lig3-211ENSMUST00000173722 NrdcQ8BHG1 1161 aa13.01□□□□□ -0.33
Lig3-211ENSMUST00000173722 Kdm5dQ62240 1548 aa12.99□□□□□ -0.33
Lig3-211ENSMUST00000173722 HrcG5E8J6 738 aa12.95□□□□□ -0.34
Lig3-211ENSMUST00000173722 Gm13697A2AK42 830 aa12.94□□□□□ -0.34
Lig3-211ENSMUST00000173722 Cdk11bP24788 784 aaKnown RBP12.94□□□□□ -0.34
Lig3-211ENSMUST00000173722 DiexfQ8BTT6 772 aaKnown RBP12.94□□□□□ -0.34
Lig3-211ENSMUST00000173722 UbtfP25976 765 aaKnown RBP12.93□□□□□ -0.34
Lig3-211ENSMUST00000173722 Ccdc180J3QNE4 1664 aa12.92□□□□□ -0.34
Lig3-211ENSMUST00000173722 Npm1Q61937 292 aaKnown RBP12.92□□□□□ -0.34
Lig3-211ENSMUST00000173722 Neurod1Q60867 357 aa12.92□□□□□ -0.34
Lig3-211ENSMUST00000173722 Ubl4bQ9CQ84 188 aa12.91□□□□□ -0.34
Lig3-211ENSMUST00000173722 Rtl1Q7M732 1744 aa12.91□□□□□ -0.34
Lig3-211ENSMUST00000173722 Eif5bQ05D44 1216 aaKnown RBP12.8□□□□□ -0.36
Lig3-211ENSMUST00000173722 ScribQ80U72 1612 aa12.8□□□□□ -0.36
Lig3-211ENSMUST00000173722 NclP09405 707 aaKnown RBP12.77□□□□□ -0.37
Lig3-211ENSMUST00000173722 Chic1Q8CBW7 227 aa12.76□□□□□ -0.37
Lig3-211ENSMUST00000173722 NefmP08553 848 aa12.75□□□□□ -0.37
Lig3-211ENSMUST00000173722 Ercc6F8VPZ5 1481 aa12.73□□□□□ -0.37
Lig3-211ENSMUST00000173722 Brd4Q9ESU6 1400 aaKnown RBP12.73□□□□□ -0.37
Lig3-211ENSMUST00000173722 Baz1aO88379 1555 aa12.72□□□□□ -0.37
Lig3-211ENSMUST00000173722 Sycp2Q9CUU3 1500 aa12.72□□□□□ -0.37
Lig3-211ENSMUST00000173722 Fam50aQ9WV03 339 aaKnown RBP12.71□□□□□ -0.37
Lig3-211ENSMUST00000173722 Dcaf1Q80TR8 1506 aa12.69□□□□□ -0.38
Lig3-211ENSMUST00000173722 Pds5bQ4VA53 1446 aaKnown RBP12.67□□□□□ -0.38
Lig3-211ENSMUST00000173722 CatipB9EKE5 520 aa12.67□□□□□ -0.38
Lig3-211ENSMUST00000173722 Gm13695A2AK44 830 aa12.65□□□□□ -0.38
Lig3-211ENSMUST00000173722 Atp1b4Q99ME6 356 aa12.65□□□□□ -0.38
Lig3-211ENSMUST00000173722 Myt1Q8CFC2 1127 aa12.61□□□□□ -0.39
Lig3-211ENSMUST00000173722 Zbtb7cQ8VCZ7 619 aa12.61□□□□□ -0.39
Lig3-211ENSMUST00000173722 Plppr3Q7TPB0 716 aa12.58□□□□□ -0.4
Lig3-211ENSMUST00000173722 Pcgf6Q99NA9 353 aa12.58□□□□□ -0.4
Lig3-211ENSMUST00000173722 Tnnt3Q9QZ47 272 aa12.58□□□□□ -0.4
Lig3-211ENSMUST00000173722 Ap3b1Q9Z1T1 1105 aa12.58□□□□□ -0.4
Lig3-211ENSMUST00000173722 Hnrnpul2Q00PI9 745 aaKnown RBP12.57□□□□□ -0.4
Lig3-211ENSMUST00000173722 Ifnlr1Q8CGK5 535 aa12.54□□□□□ -0.4
Lig3-211ENSMUST00000173722 Hsp90aa1P07901 733 aaKnown RBP12.5□□□□□ -0.41
Lig3-211ENSMUST00000173722 Kif15Q6P9L6 1387 aa12.48□□□□□ -0.41
Lig3-211ENSMUST00000173722 Nlrp6Q91WS2 869 aa12.47□□□□□ -0.41
Lig3-211ENSMUST00000173722 Polr3glQ8R0C0 218 aa12.46□□□□□ -0.41
Lig3-211ENSMUST00000173722 Rsf1E9PWW9 1441 aaKnown RBP12.45□□□□□ -0.42
Lig3-211ENSMUST00000173722 Erich6D3Z6S9 713 aa12.43□□□□□ -0.42
Lig3-211ENSMUST00000173722 Znf326O88291 580 aa12.43□□□□□ -0.42
Lig3-211ENSMUST00000173722 Prdm10Q3UTQ7 1184 aa12.42□□□□□ -0.42
Lig3-211ENSMUST00000173722 DaxxO35613 739 aa12.41□□□□□ -0.42
Lig3-211ENSMUST00000173722 Atad2bE9Q166 1460 aaKnown RBP12.38□□□□□ -0.43
Lig3-211ENSMUST00000173722 Fkbp15Q6P9Q6 1216 aaKnown RBP12.37□□□□□ -0.43
Lig3-211ENSMUST00000173722 Zbtb4Q5F293 982 aa12.36□□□□□ -0.43
Lig3-211ENSMUST00000173722 Upf2A2AT37 1269 aaKnown RBP12.35□□□□□ -0.43
Lig3-211ENSMUST00000173722 Rtl5Q5DTT4 599 aa12.34□□□□□ -0.43
Lig3-211ENSMUST00000173722 ArxO35085 564 aa12.32□□□□□ -0.44
Lig3-211ENSMUST00000173722 Crybg2B7ZCC2 1516 aa12.32□□□□□ -0.44
Lig3-211ENSMUST00000173722 Nop58Q6DFW4 536 aaKnown RBP12.32□□□□□ -0.44
Lig3-211ENSMUST00000173722 Phldb1Q6PDH0 1371 aaKnown RBP12.3□□□□□ -0.44
Lig3-211ENSMUST00000173722 Cep164Q5DU05 1446 aa12.29□□□□□ -0.44
Lig3-211ENSMUST00000173722 Hdac5Q9Z2V6 1113 aa12.28□□□□□ -0.44
Lig3-211ENSMUST00000173722 Ythdc1E9Q5K9 736 aaKnown RBP12.28□□□□□ -0.44
Lig3-211ENSMUST00000173722 Cecr2E9Q2Z1 1453 aa12.27□□□□□ -0.45
Lig3-211ENSMUST00000173722 Safb2Q80YR5 991 aaKnown RBP12.26□□□□□ -0.45
Lig3-211ENSMUST00000173722 Ccdc18Q640L5 1455 aa12.26□□□□□ -0.45
Lig3-211ENSMUST00000173722 Lmod3E9QA62 571 aa12.24□□□□□ -0.45
Lig3-211ENSMUST00000173722 Ppargc1bQ8VHJ7 1014 aa12.24□□□□□ -0.45
Lig3-211ENSMUST00000173722 Lmod2Q3UHZ5 550 aa12.23□□□□□ -0.45
Lig3-211ENSMUST00000173722 Smarca4Q3TKT4 1613 aaKnown RBP12.21□□□□□ -0.45
Lig3-211ENSMUST00000173722 Supt5hO55201 1082 aaKnown RBP12.21□□□□□ -0.45
Lig3-211ENSMUST00000173722 Rangap1P46061 589 aaKnown RBP12.21□□□□□ -0.45
Lig3-211ENSMUST00000173722 Golga3P55937 1487 aa12.2□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 55.1 ms