RNA–Protein interactions for RNA: ENSMUST00000156290.8

Ttc28-206, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ttc28, Length 10,688 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-206ENSMUST00000156290 Nutm1Q8BHP2 1126 aa11.17□□□□□ -0.62
Ttc28-206ENSMUST00000156290 SrrtQ99MR6 875 aaKnown RBP11.17□□□□□ -0.62
Ttc28-206ENSMUST00000156290 Dnaaf4Q8R368 420 aa11.17□□□□□ -0.62
Ttc28-206ENSMUST00000156290 Mcm2P97310 904 aa11.17□□□□□ -0.62
Ttc28-206ENSMUST00000156290 TimelessQ9R1X4 1197 aa11.17□□□□□ -0.62
Ttc28-206ENSMUST00000156290 Dixdc1Q80Y83 711 aa11.17□□□□□ -0.62
Ttc28-206ENSMUST00000156290 Dapk1Q80YE7 1442 aa11.17□□□□□ -0.62
Ttc28-206ENSMUST00000156290 Ttll13A4Q9F6 804 aa11.17□□□□□ -0.62
Ttc28-206ENSMUST00000156290 Hap1O35668 628 aa11.16□□□□□ -0.62
Ttc28-206ENSMUST00000156290 Cchcr1Q8K2I2 770 aa11.16□□□□□ -0.62
Ttc28-206ENSMUST00000156290 Map9Q3TRR0 646 aa11.16□□□□□ -0.62
Ttc28-206ENSMUST00000156290 Afap1Q80YS6 731 aa11.16□□□□□ -0.62
Ttc28-206ENSMUST00000156290 Puf60Q3UEB3 564 aaKnown RBP11.16□□□□□ -0.62
Ttc28-206ENSMUST00000156290 Otud6bQ8K2H2 294 aa11.15□□□□□ -0.62
Ttc28-206ENSMUST00000156290 TchhA0A0B4J1F9 1599 aa11.15□□□□□ -0.62
Ttc28-206ENSMUST00000156290 Cep112Q5PR68 954 aa11.15□□□□□ -0.62
Ttc28-206ENSMUST00000156290 Spag5Q7TME2 1165 aa11.15□□□□□ -0.62
Ttc28-206ENSMUST00000156290 GsdmaQ9EST1 446 aa11.15□□□□□ -0.62
Ttc28-206ENSMUST00000156290 BcanQ61361 883 aa11.15□□□□□ -0.62
Ttc28-206ENSMUST00000156290 Atp2b2Q9R0K7 1198 aa11.15□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Jakmip2D3YXK0 820 aa11.14□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Triml2E9PW10 424 aa11.14□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Top2aQ01320 1528 aaKnown RBP11.14□□□□□ -0.63
Ttc28-206ENSMUST00000156290 LarsQ8BMJ2 1178 aa11.14□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Ncoa2Q61026 1462 aa11.14□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Zscan10Q3URR7 782 aa11.14□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Map3k1P53349 1493 aa11.14□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Cavin1O54724 392 aa11.14□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Gpatch3Q8BIY1 525 aa11.14□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Ccdc47Q9D024 483 aaKnown RBP11.14□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Zkscan1Q8BGS3 561 aaKnown RBP11.13□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Sptbn5F6UCX4 1208 aa11.13□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Fam107bQ3TGF2 131 aa11.12□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Arhgap5P97393 1501 aa11.12□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Gm10471E9Q1C7 252 aa11.12□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Sytl4Q9R0Q1 673 aa11.12□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Rpgrip1lQ8CG73 1264 aa11.12□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Atf3Q60765 181 aa11.12□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Ddx54Q8K4L0 874 aaKnown RBP11.12□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Tmc1Q8R4P5 757 aa11.12□□□□□ -0.63
Ttc28-206ENSMUST00000156290 G3bp1P97855 465 aaKnown RBP11.12□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Chmp7Q8R1T1 451 aa11.12□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Duox2A2AQ99 1517 aa11.12□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Arhgap31A6X8Z5 1425 aa11.12□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Evc2Q8K1G2 1220 aa11.11□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Ppp2r3aB2RXC8 1150 aa11.11□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Gtpbp4Q99ME9 634 aaKnown RBP11.11□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Paip2Q9D6V8 124 aa11.11□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Ttll5Q8CHB8 1328 aa11.11□□□□□ -0.63
Ttc28-206ENSMUST00000156290 MpripP97434 1024 aa11.11□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Med4Q9CQA5 270 aa11.11□□□□□ -0.63
Ttc28-206ENSMUST00000156290 FosbP13346 338 aa11.11□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Tomm22Q9CPQ3 142 aa11.11□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Dnajc5bQ9CQ94 199 aa11.11□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Rbm10Q99KG3 930 aaKnown RBP11.11□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Tiam1Q60610 1591 aa11.1□□□□□ -0.63
Ttc28-206ENSMUST00000156290 AnlnQ8K298 1121 aaKnown RBP11.1□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Klf15Q9EPW2 415 aa11.1□□□□□ -0.63
Ttc28-206ENSMUST00000156290 PnisrA2AJT4 805 aaKnown RBP11.1□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Unc13aQ4KUS2 1712 aa11.1□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Gsto1O09131 240 aa11.1□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Usp16Q99LG0 825 aa11.1□□□□□ -0.63
Ttc28-206ENSMUST00000156290 AcrbpQ3V140 540 aa11.09□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Elp1Q7TT37 1333 aaKnown RBP11.09□□□□□ -0.63
Ttc28-206ENSMUST00000156290 ImpactO55091 318 aa11.09□□□□□ -0.63
Ttc28-206ENSMUST00000156290 IbspQ61711 324 aa11.09□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Dhx9O70133 1380 aaKnown RBP11.09□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Pdia4P08003 638 aaKnown RBP11.09□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Phldb2Q8K1N2 1249 aa11.09□□□□□ -0.63
Ttc28-206ENSMUST00000156290 Ccdc171E9Q1U1 1324 aa11.08□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Neurod6P48986 337 aa11.08□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Zranb3Q6NZP1 1069 aa11.08□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Sirt1Q923E4 737 aa11.08□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Nat10Q8K224 1024 aaKnown RBP11.08□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Rsph4aQ8BYM7 716 aa11.08□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Ccdc94Q9D6J3 314 aa11.08□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Q7TT23 1179 aa11.08□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Pank1Q8K4K6 548 aa11.07□□□□□ -0.64
Ttc28-206ENSMUST00000156290 NinlQ6ZQ12 1394 aa11.07□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Tubb6Q922F4 447 aa11.07□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Rfx1P48377 963 aa11.07□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Dydc1Q9D9T0 175 aa11.07□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Sparcl1P70663 650 aa11.07□□□□□ -0.64
Ttc28-206ENSMUST00000156290 TatQ8QZR1 454 aa11.07□□□□□ -0.64
Ttc28-206ENSMUST00000156290 MicalclQ9D5U9 680 aa11.07□□□□□ -0.64
Ttc28-206ENSMUST00000156290 TxlnbQ8VBT1 685 aa11.07□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Sf3b2Q3UJB0 878 aaKnown RBP11.07□□□□□ -0.64
Ttc28-206ENSMUST00000156290 SkilQ60665 675 aa11.07□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Dnajc2P54103 621 aaKnown RBP11.06□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Sugp2Q8CH09 1067 aa11.06□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Vps53Q8CCB4 832 aa11.06□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Zmym3Q9JLM4 1370 aa11.06□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Eif3aP23116 1344 aaKnown RBP11.06□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Gabpb2P81069 414 aa11.06□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Gm7298A0A0N4SVU1 1476 aa11.05□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Tubb4aQ9D6F9 444 aa11.05□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Tmco3Q8BH01 678 aa11.05□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Wdr78E9PYY5 807 aa11.05□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Dhx16G3X8X0 1044 aaKnown RBP11.05□□□□□ -0.64
Ttc28-206ENSMUST00000156290 Paf1Q8K2T8 535 aa11.05□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 7.6 ms