RNA–Protein interactions for RNA: ENSMUST00000149179.8

Col20a1-202, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col20a1, Length 3,867 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-202ENSMUST00000149179 Col17a1Q07563 1470 aa13.6□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Tulp4Q9JIL5 1547 aa13.6□□□□□ -0.23
Col20a1-202ENSMUST00000149179 AampJ3QN89 436 aa13.6□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Znf521Q6KAS7 1311 aa13.6□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Rrp9Q91WM3 475 aaKnown RBP13.6□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Nsfl1cQ9CZ44 370 aaKnown RBP13.6□□□□□ -0.23
Col20a1-202ENSMUST00000149179 P2rx7Q9Z1M0 595 aa13.6□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Terf2O35144 541 aa13.59□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Tsen2Q6P7W5 460 aa13.59□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Trim44Q9QXA7 346 aa13.59□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Cog6Q8R3I3 657 aa13.58□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Stag3O70576 1240 aa13.58□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Fam208aQ69ZR9 1610 aaKnown RBP13.57□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Gm14025A2AP89 1413 aa13.57□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Ccar1Q8CH18 1146 aaKnown RBP13.57□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Dnajc5bQ9CQ94 199 aa13.57□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Nectin2P32507 530 aa13.56□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Fancd2Q80V62 1450 aa13.56□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Kif18aQ91WD7 886 aa13.56□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Dmrtc1Q9D9R7 182 aa13.56□□□□□ -0.24
Col20a1-202ENSMUST00000149179 DmtnQ9WV69 405 aa13.56□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Stk11ipQ3TAA7 1072 aa13.56□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Tmco5bQ80X59 307 aa13.55□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Ccdc60Q8C4J0 545 aa13.55□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Kif2cQ922S8 721 aa13.55□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Abcc6Q9R1S7 1498 aa13.54□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Map4k4P97820 1233 aaKnown RBP13.54□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Dusp27Q148W8 1138 aa13.54□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Zranb1Q7M760 708 aa13.54□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Atl3Q91YH5 541 aa13.54□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Ppip5k1A2ARP1 1436 aa13.54□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Map7O88735 730 aa13.54□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Maco1Q7TQE6 664 aaKnown RBP13.53□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Tfip11Q9ERA6 838 aaKnown RBP13.53□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Phlpp2Q8BXA7 1320 aa13.53□□□□□ -0.24
Col20a1-202ENSMUST00000149179 AI481877A2ALV5 1481 aa13.52□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Puf60Q3UEB3 564 aaKnown RBP13.52□□□□□ -0.24
Col20a1-202ENSMUST00000149179 Nsd2Q8BVE8 1365 aa13.52□□□□□ -0.24
Col20a1-202ENSMUST00000149179 4933402E13RikQ9D4D2 429 aa13.52□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Kif20aP97329 887 aa13.52□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Zcchc11B2RX14 1644 aaKnown RBP13.51□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Mast1Q9R1L5 1570 aa13.51□□□□□ -0.25
Col20a1-202ENSMUST00000149179 IbspQ61711 324 aa13.51□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Cep170Q6A065 1588 aa13.5□□□□□ -0.25
Col20a1-202ENSMUST00000149179 NgefQ8CHT1 710 aa13.5□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Prdm16A2A935 1275 aa13.5□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Cald1E9QA15 768 aaKnown RBP13.5□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Stk26Q99JT2 416 aa13.49□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Atp1b4Q99ME6 356 aa13.49□□□□□ -0.25
Col20a1-202ENSMUST00000149179 ErbinQ80TH2 1402 aa13.49□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Kdm5aQ3UXZ9 1690 aa13.49□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Erich6bQ9D4S6 220 aa13.49□□□□□ -0.25
Col20a1-202ENSMUST00000149179 IbtkQ6ZPR6 1352 aaKnown RBP13.49□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Zfp777B9EKF4 885 aa13.49□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Rrp12Q6P5B0 1295 aaKnown RBP13.49□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Fam135bQ9DAI6 1403 aa13.49□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Rbm10Q99KG3 930 aaKnown RBP13.48□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Q4VA45 678 aa13.48□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Exosc9Q9JHI7 438 aaKnown RBP13.48□□□□□ -0.25
Col20a1-202ENSMUST00000149179 PogkQ80TC5 607 aa13.48□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Rsph3aQ3UFY4 516 aa13.47□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Ddit3P35639 168 aa13.47□□□□□ -0.25
Col20a1-202ENSMUST00000149179 SkilQ60665 675 aa13.47□□□□□ -0.25
Col20a1-202ENSMUST00000149179 KnstrnQ9D9Z1 312 aaKnown RBP13.47□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Myom2Q14BI5 1463 aa13.46□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Rbm25B2RY56 838 aaKnown RBP13.46□□□□□ -0.25
Col20a1-202ENSMUST00000149179 Ccdc146E9Q9F7 977 aa13.46□□□□□ -0.26
Col20a1-202ENSMUST00000149179 G3bp1P97855 465 aaKnown RBP13.45□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Nek4Q9Z1J2 792 aa13.45□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Pola1P33609 1465 aa13.45□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Gm32742A0A1B0GT42 1604 aa13.45□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Ttc21bQ0HA38 1315 aa13.45□□□□□ -0.26
Col20a1-202ENSMUST00000149179 PtmaP26350 111 aa13.44□□□□□ -0.26
Col20a1-202ENSMUST00000149179 CastP51125 788 aa13.44□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Stard8Q8K031 1019 aa13.44□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Usp54Q8BL06 1588 aaKnown RBP13.44□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Pbrm1Q8BSQ9 1634 aaKnown RBP13.43□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Plin1Q8CGN5 517 aa13.43□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Scaf11E9PZM7 1456 aaKnown RBP13.42□□□□□ -0.26
Col20a1-202ENSMUST00000149179 IqubQ8CDK3 788 aa13.42□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Myo3aQ8K3H5 1613 aa13.42□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Arid3cA6PWV5 409 aa13.41□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Brd1E9PZ26 1189 aaKnown RBP13.41□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Chmp4cQ9D7F7 232 aa13.41□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Pdia4P08003 638 aaKnown RBP13.41□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Tbc1d9Q3UYK3 1264 aa13.41□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Cdc42bpbQ7TT50 1713 aa13.41□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Kif1bQ60575 1816 aaKnown RBP13.4□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Itsn2Q9Z0R6 1659 aa13.4□□□□□ -0.26
Col20a1-202ENSMUST00000149179 Bloc1s4Q8VED2 215 aa13.39□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Gprasp1Q5U4C1 1347 aa13.39□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Gm10093D3YYI8 482 aa13.39□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Hdac1O09106 482 aaKnown RBP13.39□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Rusc2Q80U22 1514 aa13.39□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Dnmt1P13864 1620 aaKnown RBP13.39□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Robo2Q7TPD3 1470 aa13.38□□□□□ -0.27
Col20a1-202ENSMUST00000149179 AatkQ80YE4 1365 aa13.38□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Dhx16G3X8X0 1044 aaKnown RBP13.38□□□□□ -0.27
Col20a1-202ENSMUST00000149179 U2surpQ6NV83 1029 aaKnown RBP13.38□□□□□ -0.27
Col20a1-202ENSMUST00000149179 Ddrgk1Q80WW9 315 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms