RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Nsd2Q8BVE8 1365 aa14.17□□□□□ -0.14
Ndc1-204ENSMUST00000139560 TimelessQ9R1X4 1197 aa14.16□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Chmp7Q8R1T1 451 aa14.16□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Ncoa2Q61026 1462 aa14.16□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Neurod6P48986 337 aa14.16□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Fnbp4Q6ZQ03 1031 aa14.15□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Bcl11bQ99PV8 884 aa14.15□□□□□ -0.14
Ndc1-204ENSMUST00000139560 Dusp27Q148W8 1138 aa14.14□□□□□ -0.15
Ndc1-204ENSMUST00000139560 PtprkP35822 1457 aa14.14□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Syce3B5KM66 88 aa14.14□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Tpm3-rs7D3Z2H9 248 aa14.14□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Ift140E9PY46 1464 aa14.14□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Prdm16A2A935 1275 aa14.14□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Mcm4P49717 862 aa14.14□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Sytl4Q9R0Q1 673 aa14.14□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Cfdp1O88271 295 aaKnown RBP14.14□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Afap1Q80YS6 731 aa14.14□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Jakmip1Q8BVL9 626 aa14.13□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Cd109Q8R422 1442 aa14.13□□□□□ -0.15
Ndc1-204ENSMUST00000139560 KinQ8K339 391 aa14.12□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Glipr1l2Q9CQ35 332 aa14.12□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Map7d2A2AG50 781 aa14.12□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Cc2d2aQ8CFW7 1633 aa14.12□□□□□ -0.15
Ndc1-204ENSMUST00000139560 TatQ8QZR1 454 aa14.12□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Vps8Q0P5W1 1427 aa14.11□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Tpm2P58774 284 aa14.11□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Cbx1P83917 185 aaKnown RBP14.11□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Cyp46a1Q9WVK8 500 aa14.11□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Tpm3P21107 285 aaKnown RBP14.11□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Swt1Q9DBQ9 907 aa14.1□□□□□ -0.15
Ndc1-204ENSMUST00000139560 DmtnQ9WV69 405 aa14.1□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Ppm1fQ8CGA0 452 aa14.1□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Zkscan1Q8BGS3 561 aaKnown RBP14.1□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Gabpb2P81069 414 aa14.09□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Tmc1Q8R4P5 757 aa14.09□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Gm10471E9Q1C7 252 aa14.09□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Q8C5K5 320 aa14.09□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Gm7298A0A0N4SVU1 1476 aa14.09□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Maco1Q7TQE6 664 aaKnown RBP14.08□□□□□ -0.15
Ndc1-204ENSMUST00000139560 Cnnm3Q32NY4 713 aa14.08□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Gnai1B2RSH2 354 aa14.08□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Gnai3Q9DC51 354 aa14.08□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Aplp1Q03157 653 aa14.08□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Egfem1Q8C088 590 aa14.08□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Cetn4Q8K4K1 168 aa14.08□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Znf704Q9ERQ3 566 aa14.08□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Rab3gap2Q8BMG7 1366 aa14.08□□□□□ -0.16
Ndc1-204ENSMUST00000139560 MpripP97434 1024 aa14.07□□□□□ -0.16
Ndc1-204ENSMUST00000139560 BcanQ61361 883 aa14.07□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Smc4Q8CG47 1286 aa14.07□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Sv2bQ8BG39 683 aa14.07□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Smc5Q8CG46 1101 aaKnown RBP14.07□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Ncbp3Q8BZR9 615 aaKnown RBP14.07□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Hook1Q8BIL5 728 aa14.06□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Smarca5Q91ZW3 1051 aaKnown RBP14.06□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Zbtb22Q9Z0G7 638 aa14.06□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Plekhg5Q66T02 1073 aa14.06□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Kdm4aQ8BW72 1064 aa14.06□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Arhgap5P97393 1501 aa14.06□□□□□ -0.16
Ndc1-204ENSMUST00000139560 PogzQ8BZH4 1409 aaKnown RBP14.06□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Cplx1P63040 134 aa14.06□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Dnai2A2AC93 623 aa14.05□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Krt82Q99M74 516 aa14.05□□□□□ -0.16
Ndc1-204ENSMUST00000139560 PrxO55103 1391 aa14.05□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Fgd6Q69ZL1 1399 aa14.05□□□□□ -0.16
Ndc1-204ENSMUST00000139560 1700010I14RikQ7TPG0 532 aa14.05□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Samm50Q8BGH2 469 aa14.05□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Arhgef5E9Q7D5 1581 aa14.05□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Zranb3Q6NZP1 1069 aa14.05□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Ppp1r9bQ6R891 817 aaKnown RBP14.05□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Chrna2Q91X60 512 aa14.05□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Cabp2Q9JLK4 216 aa14.05□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Evi5lH3BKQ3 813 aa14.04□□□□□ -0.16
Ndc1-204ENSMUST00000139560 CastP51125 788 aa14.04□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Fez1Q8K0X8 392 aa14.04□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Serpina10Q8R121 448 aa14.04□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Cux1P53564 1515 aa14.04□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Ggnbp2Q5SV77 696 aa14.04□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Mcm3P25206 812 aaKnown RBP14.03□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Rec8Q8C5S7 591 aa14.03□□□□□ -0.16
Ndc1-204ENSMUST00000139560 SetQ9EQU5 289 aaKnown RBP14.03□□□□□ -0.16
Ndc1-204ENSMUST00000139560 FanciQ8K368 1330 aa14.03□□□□□ -0.16
Ndc1-204ENSMUST00000139560 NrkQ9R0G8 1455 aa14.03□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Rbm27Q5SFM8 1060 aaKnown RBP14.03□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Atf3Q60765 181 aa14.03□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Rsph6aQ8CDR2 708 aa14.03□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Ccdc173A0JLY1 547 aa14.03□□□□□ -0.16
Ndc1-204ENSMUST00000139560 Grin2bQ01097 1482 aa14.02□□□□□ -0.17
Ndc1-204ENSMUST00000139560 Cavin4A2AMM0 362 aa14.02□□□□□ -0.17
Ndc1-204ENSMUST00000139560 Kif3aP28741 701 aa14.02□□□□□ -0.17
Ndc1-204ENSMUST00000139560 Map3k13Q1HKZ5 959 aa14.02□□□□□ -0.17
Ndc1-204ENSMUST00000139560 NexnQ7TPW1 607 aa14.02□□□□□ -0.17
Ndc1-204ENSMUST00000139560 Znf771Q8BJ90 317 aa14.02□□□□□ -0.17
Ndc1-204ENSMUST00000139560 Myom3A2ABU4 1439 aa14.02□□□□□ -0.17
Ndc1-204ENSMUST00000139560 Cwc27Q3TKY6 469 aa14.02□□□□□ -0.17
Ndc1-204ENSMUST00000139560 Sirt1Q923E4 737 aa14.02□□□□□ -0.17
Ndc1-204ENSMUST00000139560 CadpsQ80TJ1 1355 aa14.01□□□□□ -0.17
Ndc1-204ENSMUST00000139560 Ppfia3P60469 1194 aa14.01□□□□□ -0.17
Ndc1-204ENSMUST00000139560 Dhx16G3X8X0 1044 aaKnown RBP14.01□□□□□ -0.17
Ndc1-204ENSMUST00000139560 Mroh2bQ7M6Y6 1581 aa14.01□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms