RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Shq1Q7TMX5 569 aa19.98■□□□□ 0.79
Trim11-203ENSMUST00000108810 PplQ9R269 1755 aa19.98■□□□□ 0.79
Trim11-203ENSMUST00000108810 Abca14E9Q8F8 1683 aa19.97■□□□□ 0.79
Trim11-203ENSMUST00000108810 Zfp444Q3TDV8 331 aaKnown RBP19.96■□□□□ 0.79
Trim11-203ENSMUST00000108810 Dcaf11Q91VU6 549 aa19.96■□□□□ 0.79
Trim11-203ENSMUST00000108810 Nrxn1Q9CS84 1514 aa19.95■□□□□ 0.78
Trim11-203ENSMUST00000108810 Chd2E9PZM4 1827 aaKnown RBP19.95■□□□□ 0.78
Trim11-203ENSMUST00000108810 L3mbtl2P59178 703 aa19.94■□□□□ 0.78
Trim11-203ENSMUST00000108810 P3h3Q8CG70 732 aa19.94■□□□□ 0.78
Trim11-203ENSMUST00000108810 Dip2aQ8BWT5 1523 aa19.94■□□□□ 0.78
Trim11-203ENSMUST00000108810 Cnga1P29974 684 aa19.94■□□□□ 0.78
Trim11-203ENSMUST00000108810 Plekhg1F6S200 1446 aa19.94■□□□□ 0.78
Trim11-203ENSMUST00000108810 Stk26Q99JT2 416 aa19.93■□□□□ 0.78
Trim11-203ENSMUST00000108810 Kank1E9Q238 1360 aa19.92■□□□□ 0.78
Trim11-203ENSMUST00000108810 NktrP30415 1453 aa19.92■□□□□ 0.78
Trim11-203ENSMUST00000108810 Q9D9H8 365 aa19.91■□□□□ 0.78
Trim11-203ENSMUST00000108810 Nwd1A6H603 1563 aa19.91■□□□□ 0.78
Trim11-203ENSMUST00000108810 Gemin5Q8BX17 1502 aaKnown RBP19.9■□□□□ 0.78
Trim11-203ENSMUST00000108810 Atp1b4Q99ME6 356 aa19.9■□□□□ 0.78
Trim11-203ENSMUST00000108810 Esx1O88933 382 aa19.89■□□□□ 0.77
Trim11-203ENSMUST00000108810 Erbb3Q61526 1339 aa19.89■□□□□ 0.77
Trim11-203ENSMUST00000108810 Scaf11E9PZM7 1456 aaKnown RBP19.88■□□□□ 0.77
Trim11-203ENSMUST00000108810 Kiaa1107Q80TK0 1369 aa19.86■□□□□ 0.77
Trim11-203ENSMUST00000108810 Adgrl1Q80TR1 1466 aa19.85■□□□□ 0.77
Trim11-203ENSMUST00000108810 Usp19Q3UJD6 1360 aa19.85■□□□□ 0.77
Trim11-203ENSMUST00000108810 Mink1Q9JM52 1308 aa19.84■□□□□ 0.77
Trim11-203ENSMUST00000108810 Utp14aQ640M1 767 aaKnown RBP19.84■□□□□ 0.77
Trim11-203ENSMUST00000108810 IbtkQ6ZPR6 1352 aaKnown RBP19.82■□□□□ 0.76
Trim11-203ENSMUST00000108810 Asxl2Q8BZ32 1370 aa19.82■□□□□ 0.76
Trim11-203ENSMUST00000108810 Kif16bB1AVY7 1312 aa19.81■□□□□ 0.76
Trim11-203ENSMUST00000108810 Zranb1Q7M760 708 aa19.81■□□□□ 0.76
Trim11-203ENSMUST00000108810 Dip2bQ3UH60 1574 aa19.81■□□□□ 0.76
Trim11-203ENSMUST00000108810 Slit3Q9WVB4 1523 aa19.81■□□□□ 0.76
Trim11-203ENSMUST00000108810 CenpbP27790 599 aa19.8■□□□□ 0.76
Trim11-203ENSMUST00000108810 Exosc9Q9JHI7 438 aaKnown RBP19.8■□□□□ 0.76
Trim11-203ENSMUST00000108810 Atp2b2Q9R0K7 1198 aa19.8■□□□□ 0.76
Trim11-203ENSMUST00000108810 Nlrp6Q91WS2 869 aa19.8■□□□□ 0.76
Trim11-203ENSMUST00000108810 Ttc41Q692V3 1318 aa19.79■□□□□ 0.76
Trim11-203ENSMUST00000108810 Rad21Q61550 635 aaKnown RBP19.79■□□□□ 0.76
Trim11-203ENSMUST00000108810 P2rx7Q9Z1M0 595 aa19.79■□□□□ 0.76
Trim11-203ENSMUST00000108810 Prdm10Q3UTQ7 1184 aa19.79■□□□□ 0.76
Trim11-203ENSMUST00000108810 Gsto1O09131 240 aa19.78■□□□□ 0.76
Trim11-203ENSMUST00000108810 IghaA0A0A6YXW6 389 aa19.77■□□□□ 0.76
Trim11-203ENSMUST00000108810 Cald1E9QA15 768 aaKnown RBP19.77■□□□□ 0.76
Trim11-203ENSMUST00000108810 Cps1Q8C196 1500 aa19.77■□□□□ 0.76
Trim11-203ENSMUST00000108810 CrbnQ8C7D2 445 aa19.77■□□□□ 0.76
Trim11-203ENSMUST00000108810 Cdk19Q8BWD8 501 aa19.76■□□□□ 0.75
Trim11-203ENSMUST00000108810 Usp32F8VPZ3 1604 aa19.75■□□□□ 0.75
Trim11-203ENSMUST00000108810 Iqsec2Q5DU25 1478 aa19.73■□□□□ 0.75
Trim11-203ENSMUST00000108810 Upf2A2AT37 1269 aaKnown RBP19.73■□□□□ 0.75
Trim11-203ENSMUST00000108810 Txndc2Q6P902 515 aa19.73■□□□□ 0.75
Trim11-203ENSMUST00000108810 Psme1P97371 249 aa19.73■□□□□ 0.75
Trim11-203ENSMUST00000108810 Arap3Q8R5G7 1538 aa19.72■□□□□ 0.75
Trim11-203ENSMUST00000108810 NinlQ6ZQ12 1394 aa19.71■□□□□ 0.75
Trim11-203ENSMUST00000108810 FanciQ8K368 1330 aa19.71■□□□□ 0.75
Trim11-203ENSMUST00000108810 Golga2Q921M4 999 aa19.7■□□□□ 0.74
Trim11-203ENSMUST00000108810 Uspl1Q3ULM6 1089 aa19.69■□□□□ 0.74
Trim11-203ENSMUST00000108810 Pik3c2bE9QAN8 1632 aa19.69■□□□□ 0.74
Trim11-203ENSMUST00000108810 Map4k4P97820 1233 aaKnown RBP19.68■□□□□ 0.74
Trim11-203ENSMUST00000108810 PzpQ61838 1495 aa19.68■□□□□ 0.74
Trim11-203ENSMUST00000108810 Plppr3Q7TPB0 716 aa19.68■□□□□ 0.74
Trim11-203ENSMUST00000108810 GsdmaQ9EST1 446 aa19.68■□□□□ 0.74
Trim11-203ENSMUST00000108810 Map3k19E9Q3S4 1311 aa19.67■□□□□ 0.74
Trim11-203ENSMUST00000108810 Anp32aO35381 247 aa19.67■□□□□ 0.74
Trim11-203ENSMUST00000108810 Safb2Q80YR5 991 aaKnown RBP19.67■□□□□ 0.74
Trim11-203ENSMUST00000108810 Wdr43Q6ZQL4 677 aaKnown RBP19.65■□□□□ 0.74
Trim11-203ENSMUST00000108810 Plekhh1Q80TI1 1356 aa19.65■□□□□ 0.74
Trim11-203ENSMUST00000108810 Speer4f1Q9D5Q6 258 aa19.65■□□□□ 0.74
Trim11-203ENSMUST00000108810 4930407I10RikD3Z5T8 1512 aa19.64■□□□□ 0.73
Trim11-203ENSMUST00000108810 Kif1aP33173 1695 aa19.64■□□□□ 0.73
Trim11-203ENSMUST00000108810 Tnrc6bQ8BKI2 1810 aaKnown RBP19.64■□□□□ 0.73
Trim11-203ENSMUST00000108810 Pik3r4Q8VD65 1358 aa19.64■□□□□ 0.73
Trim11-203ENSMUST00000108810 PtpruB1AUH1 1446 aa19.64■□□□□ 0.73
Trim11-203ENSMUST00000108810 Nolc1E9Q5C9 702 aaKnown RBP19.63■□□□□ 0.73
Trim11-203ENSMUST00000108810 Ccdc30Q8BVF4 654 aa19.63■□□□□ 0.73
Trim11-203ENSMUST00000108810 Bcl9Q9D219 1425 aa19.62■□□□□ 0.73
Trim11-203ENSMUST00000108810 Kcnh8P59111 1102 aa19.61■□□□□ 0.73
Trim11-203ENSMUST00000108810 Lmtk3Q5XJV6 1424 aa19.61■□□□□ 0.73
Trim11-203ENSMUST00000108810 Ralbp1Q62172 648 aa19.6■□□□□ 0.73
Trim11-203ENSMUST00000108810 N4bp2F8VQG7 1678 aaKnown RBP19.59■□□□□ 0.73
Trim11-203ENSMUST00000108810 Ppp4r2Q0VGB7 417 aa19.59■□□□□ 0.73
Trim11-203ENSMUST00000108810 Rreb1Q3UH06 1700 aaKnown RBP19.59■□□□□ 0.73
Trim11-203ENSMUST00000108810 D430041D05RikF6ZGR6 1678 aa19.57■□□□□ 0.72
Trim11-203ENSMUST00000108810 TnikP83510 1323 aa19.57■□□□□ 0.72
Trim11-203ENSMUST00000108810 Tsen2Q6P7W5 460 aa19.57■□□□□ 0.72
Trim11-203ENSMUST00000108810 Idi2Q8BFZ6 227 aa19.57■□□□□ 0.72
Trim11-203ENSMUST00000108810 Neurod2Q62414 383 aa19.56■□□□□ 0.72
Trim11-203ENSMUST00000108810 HnrnpmQ9D0E1 729 aaKnown RBP19.56■□□□□ 0.72
Trim11-203ENSMUST00000108810 Znf541Q0GGX2 1363 aa19.55■□□□□ 0.72
Trim11-203ENSMUST00000108810 Pcdh10E9PXQ7 1057 aa19.55■□□□□ 0.72
Trim11-203ENSMUST00000108810 Ncbp3Q8BZR9 615 aaKnown RBP19.54■□□□□ 0.72
Trim11-203ENSMUST00000108810 U2af1Q9D883 239 aaKnown RBP19.54■□□□□ 0.72
Trim11-203ENSMUST00000108810 Kif20bQ80WE4 1774 aaKnown RBP19.53■□□□□ 0.72
Trim11-203ENSMUST00000108810 Trim28Q62318 834 aa19.53■□□□□ 0.72
Trim11-203ENSMUST00000108810 Prkrip1Q9CWV6 186 aaKnown RBP19.52■□□□□ 0.72
Trim11-203ENSMUST00000108810 Sirt1Q923E4 737 aa19.52■□□□□ 0.71
Trim11-203ENSMUST00000108810 Chd4Q6PDQ2 1915 aaKnown RBP19.52■□□□□ 0.71
Trim11-203ENSMUST00000108810 C5P06684 1680 aa19.51■□□□□ 0.71
Trim11-203ENSMUST00000108810 Gas2l2Q5SSG4 860 aa19.51■□□□□ 0.71
Trim11-203ENSMUST00000108810 Als2Q920R0 1651 aa19.51■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms