RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 GnpatP98192 678 aa13.92□□□□□ -0.18
Chd3-202ENSMUST00000108661 Zscan10Q3URR7 782 aa13.92□□□□□ -0.18
Chd3-202ENSMUST00000108661 Ric3Q8BPM6 367 aa13.92□□□□□ -0.18
Chd3-202ENSMUST00000108661 Swt1Q9DBQ9 907 aa13.92□□□□□ -0.18
Chd3-202ENSMUST00000108661 Smg6P61406 1418 aaKnown RBP13.91□□□□□ -0.18
Chd3-202ENSMUST00000108661 Triml2E9PW10 424 aa13.91□□□□□ -0.18
Chd3-202ENSMUST00000108661 PhaxQ9JJT9 385 aaKnown RBP13.91□□□□□ -0.18
Chd3-202ENSMUST00000108661 Grin2bQ01097 1482 aa13.9□□□□□ -0.18
Chd3-202ENSMUST00000108661 Fkbp4P30416 458 aa13.9□□□□□ -0.18
Chd3-202ENSMUST00000108661 Fnbp4Q6ZQ03 1031 aa13.9□□□□□ -0.18
Chd3-202ENSMUST00000108661 Fam50bQ9WTJ8 334 aa13.9□□□□□ -0.18
Chd3-202ENSMUST00000108661 Kdm2bQ6P1G2 1309 aa13.9□□□□□ -0.18
Chd3-202ENSMUST00000108661 IkQ9Z1M8 557 aaKnown RBP13.9□□□□□ -0.18
Chd3-202ENSMUST00000108661 Prl7d1P04769 244 aa13.89□□□□□ -0.19
Chd3-202ENSMUST00000108661 Tpm2P58774 284 aa13.89□□□□□ -0.19
Chd3-202ENSMUST00000108661 Rock1P70335 1354 aa13.89□□□□□ -0.19
Chd3-202ENSMUST00000108661 Klc3Q91W40 508 aa13.89□□□□□ -0.19
Chd3-202ENSMUST00000108661 Ripply1Q2WG77 201 aa13.89□□□□□ -0.19
Chd3-202ENSMUST00000108661 Atp6v1dP57746 247 aa13.89□□□□□ -0.19
Chd3-202ENSMUST00000108661 NgdnQ9DB96 315 aaKnown RBP13.89□□□□□ -0.19
Chd3-202ENSMUST00000108661 Stard3nlQ9DCI3 235 aa13.89□□□□□ -0.19
Chd3-202ENSMUST00000108661 EprsQ8CGC7 1512 aaKnown RBP13.89□□□□□ -0.19
Chd3-202ENSMUST00000108661 Trim34bJ3QNR8 485 aa13.89□□□□□ -0.19
Chd3-202ENSMUST00000108661 Ppp4r3bQ922R5 820 aa13.89□□□□□ -0.19
Chd3-202ENSMUST00000108661 Kiaa0754Q69ZZ9 979 aa13.88□□□□□ -0.19
Chd3-202ENSMUST00000108661 Flad1Q8R123 492 aa13.88□□□□□ -0.19
Chd3-202ENSMUST00000108661 AU015836B2RUM3 263 aa13.88□□□□□ -0.19
Chd3-202ENSMUST00000108661 NrkQ9R0G8 1455 aa13.87□□□□□ -0.19
Chd3-202ENSMUST00000108661 Cetn4Q8K4K1 168 aa13.87□□□□□ -0.19
Chd3-202ENSMUST00000108661 OvosQ3UU35 1456 aa13.87□□□□□ -0.19
Chd3-202ENSMUST00000108661 Q3UJC8 639 aa13.86□□□□□ -0.19
Chd3-202ENSMUST00000108661 Strn4P58404 760 aa13.86□□□□□ -0.19
Chd3-202ENSMUST00000108661 Emilin2Q8K482 1074 aa13.86□□□□□ -0.19
Chd3-202ENSMUST00000108661 Dnajc5bQ9CQ94 199 aa13.86□□□□□ -0.19
Chd3-202ENSMUST00000108661 Znf704Q9ERQ3 566 aa13.86□□□□□ -0.19
Chd3-202ENSMUST00000108661 Erc2Q6PH08 957 aa13.86□□□□□ -0.19
Chd3-202ENSMUST00000108661 Zmym3Q9JLM4 1370 aa13.85□□□□□ -0.19
Chd3-202ENSMUST00000108661 Srek1Q8BZX4 494 aaKnown RBP13.85□□□□□ -0.19
Chd3-202ENSMUST00000108661 Wdr78E9PYY5 807 aa13.85□□□□□ -0.19
Chd3-202ENSMUST00000108661 Gm10563F6WIE4 79 aa13.85□□□□□ -0.19
Chd3-202ENSMUST00000108661 Rnf20Q5DTM8 973 aa13.85□□□□□ -0.19
Chd3-202ENSMUST00000108661 Supt16hQ920B9 1047 aa13.84□□□□□ -0.19
Chd3-202ENSMUST00000108661 Kcnh5Q920E3 988 aa13.84□□□□□ -0.19
Chd3-202ENSMUST00000108661 Cplx1P63040 134 aa13.84□□□□□ -0.19
Chd3-202ENSMUST00000108661 Washc4Q3UMB9 1173 aa13.84□□□□□ -0.19
Chd3-202ENSMUST00000108661 Lrrcc1Q69ZB0 1026 aa13.84□□□□□ -0.19
Chd3-202ENSMUST00000108661 March6Q6ZQ89 909 aa13.84□□□□□ -0.19
Chd3-202ENSMUST00000108661 Ncbp1Q3UYV9 790 aaKnown RBP13.84□□□□□ -0.19
Chd3-202ENSMUST00000108661 AcrbpQ3V140 540 aa13.84□□□□□ -0.19
Chd3-202ENSMUST00000108661 Eif3bQ8JZQ9 803 aaKnown RBP13.84□□□□□ -0.19
Chd3-202ENSMUST00000108661 Ripk4Q9ERK0 786 aa13.84□□□□□ -0.19
Chd3-202ENSMUST00000108661 Calcoco2A2A6M5 331 aa13.84□□□□□ -0.19
Chd3-202ENSMUST00000108661 Cald1E9QA15 768 aaKnown RBP13.84□□□□□ -0.19
Chd3-202ENSMUST00000108661 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.83□□□□□ -0.19
Chd3-202ENSMUST00000108661 Hdgfl1Q2VPR5 283 aa13.83□□□□□ -0.19
Chd3-202ENSMUST00000108661 Rbm25B2RY56 838 aaKnown RBP13.83□□□□□ -0.19
Chd3-202ENSMUST00000108661 SetQ9EQU5 289 aaKnown RBP13.83□□□□□ -0.19
Chd3-202ENSMUST00000108661 Ipo8Q7TMY7 1010 aa13.83□□□□□ -0.2
Chd3-202ENSMUST00000108661 Ttc19Q8CC21 365 aa13.83□□□□□ -0.2
Chd3-202ENSMUST00000108661 Ccdc96Q9CR92 584 aa13.83□□□□□ -0.2
Chd3-202ENSMUST00000108661 Zfp644E9QA22 1323 aa13.83□□□□□ -0.2
Chd3-202ENSMUST00000108661 Ralbp1Q62172 648 aa13.83□□□□□ -0.2
Chd3-202ENSMUST00000108661 PsapQ61207 557 aaKnown RBP13.83□□□□□ -0.2
Chd3-202ENSMUST00000108661 Agtpbp1Q641K1 1218 aa13.82□□□□□ -0.2
Chd3-202ENSMUST00000108661 Nlrp3Q8R4B8 1033 aa13.82□□□□□ -0.2
Chd3-202ENSMUST00000108661 Ehmt1Q5DW34 1296 aa13.82□□□□□ -0.2
Chd3-202ENSMUST00000108661 GlmnQ8BZM1 596 aa13.82□□□□□ -0.2
Chd3-202ENSMUST00000108661 Fam163aQ8CAA5 168 aa13.82□□□□□ -0.2
Chd3-202ENSMUST00000108661 Me1P06801 572 aa13.82□□□□□ -0.2
Chd3-202ENSMUST00000108661 Nectin2P32507 530 aa13.82□□□□□ -0.2
Chd3-202ENSMUST00000108661 Kcnh8P59111 1102 aa13.81□□□□□ -0.2
Chd3-202ENSMUST00000108661 Farp2Q91VS8 1065 aa13.81□□□□□ -0.2
Chd3-202ENSMUST00000108661 Wdr62Q3U3T8 1523 aa13.81□□□□□ -0.2
Chd3-202ENSMUST00000108661 EappQ5BU09 281 aa13.8□□□□□ -0.2
Chd3-202ENSMUST00000108661 Btbd11Q6GQW0 1109 aa13.8□□□□□ -0.2
Chd3-202ENSMUST00000108661 Cabp2Q9JLK4 216 aa13.8□□□□□ -0.2
Chd3-202ENSMUST00000108661 Tpm3P21107 285 aaKnown RBP13.8□□□□□ -0.2
Chd3-202ENSMUST00000108661 Exoc5Q3TPX4 708 aa13.79□□□□□ -0.2
Chd3-202ENSMUST00000108661 Ankrd13dQ6PD24 605 aa13.79□□□□□ -0.2
Chd3-202ENSMUST00000108661 Esx1O88933 382 aa13.79□□□□□ -0.2
Chd3-202ENSMUST00000108661 Hmox1P14901 289 aa13.79□□□□□ -0.2
Chd3-202ENSMUST00000108661 SlkO54988 1233 aa13.78□□□□□ -0.2
Chd3-202ENSMUST00000108661 Jmjd4Q8BFT6 427 aa13.78□□□□□ -0.2
Chd3-202ENSMUST00000108661 Chmp4cQ9D7F7 232 aa13.78□□□□□ -0.2
Chd3-202ENSMUST00000108661 Gm156Q58A37 223 aa13.78□□□□□ -0.2
Chd3-202ENSMUST00000108661 Filip1lQ6P6L0 1131 aa13.78□□□□□ -0.2
Chd3-202ENSMUST00000108661 Nap1l3Q794H2 544 aa13.77□□□□□ -0.2
Chd3-202ENSMUST00000108661 Ylpm1Q9R0I7 1386 aaKnown RBP13.77□□□□□ -0.2
Chd3-202ENSMUST00000108661 A0A1L1SQF0 893 aa13.77□□□□□ -0.2
Chd3-202ENSMUST00000108661 Fam193aQ8CGI1 1231 aaKnown RBP13.77□□□□□ -0.21
Chd3-202ENSMUST00000108661 FosbP13346 338 aa13.76□□□□□ -0.21
Chd3-202ENSMUST00000108661 Znf697Q569E7 569 aa13.76□□□□□ -0.21
Chd3-202ENSMUST00000108661 Ftsj3Q9DBE9 838 aaKnown RBP13.76□□□□□ -0.21
Chd3-202ENSMUST00000108661 OptnQ8K3K8 584 aa13.76□□□□□ -0.21
Chd3-202ENSMUST00000108661 Trim29Q8R2Q0 587 aa13.76□□□□□ -0.21
Chd3-202ENSMUST00000108661 Rbm28Q8CGC6 750 aaKnown RBP13.76□□□□□ -0.21
Chd3-202ENSMUST00000108661 St18Q80TY4 1045 aa13.75□□□□□ -0.21
Chd3-202ENSMUST00000108661 Slc5a1Q8C3K6 665 aa13.75□□□□□ -0.21
Chd3-202ENSMUST00000108661 Nol11Q8BJW5 723 aaKnown RBP13.75□□□□□ -0.21
Chd3-202ENSMUST00000108661 Tpm1P58771 284 aa13.74□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms