RNA–Protein interactions for RNA: ENSMUST00000102501.9

Vps39-202, Transcript of Vam6/Vps39-like protein, mousemouse

TSL 1 (best) BASIC

Gene Vps39, Length 4,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39-202ENSMUST00000102501 Gm32742A0A1B0GT42 1604 aa9.51□□□□□ -0.89
Vps39-202ENSMUST00000102501 Cluap1Q8R3P7 413 aa9.51□□□□□ -0.89
Vps39-202ENSMUST00000102501 Mast1Q9R1L5 1570 aa9.51□□□□□ -0.89
Vps39-202ENSMUST00000102501 Kif14L0N7N1 1674 aaKnown RBP9.5□□□□□ -0.89
Vps39-202ENSMUST00000102501 FanciQ8K368 1330 aa9.5□□□□□ -0.89
Vps39-202ENSMUST00000102501 Kcnh8P59111 1102 aa9.5□□□□□ -0.89
Vps39-202ENSMUST00000102501 Fndc1E9Q043 1732 aa9.5□□□□□ -0.89
Vps39-202ENSMUST00000102501 Cald1E9QA15 768 aaKnown RBP9.5□□□□□ -0.89
Vps39-202ENSMUST00000102501 Iqcf3Q9D498 203 aa9.49□□□□□ -0.89
Vps39-202ENSMUST00000102501 Cpsf1Q9EPU4 1441 aaKnown RBP9.49□□□□□ -0.89
Vps39-202ENSMUST00000102501 Rab3gap2Q8BMG7 1366 aa9.49□□□□□ -0.89
Vps39-202ENSMUST00000102501 Skint5A7XUY5 1461 aa9.49□□□□□ -0.89
Vps39-202ENSMUST00000102501 Atf3Q60765 181 aa9.49□□□□□ -0.89
Vps39-202ENSMUST00000102501 Vsig10D3YX43 558 aa9.48□□□□□ -0.89
Vps39-202ENSMUST00000102501 Pak3Q61036 559 aa9.48□□□□□ -0.89
Vps39-202ENSMUST00000102501 Ccdc30Q8BVF4 654 aa9.48□□□□□ -0.89
Vps39-202ENSMUST00000102501 Atxn3Q9CVD2 355 aa9.48□□□□□ -0.89
Vps39-202ENSMUST00000102501 Kif1bQ60575 1816 aaKnown RBP9.48□□□□□ -0.89
Vps39-202ENSMUST00000102501 DekQ7TNV0 380 aaKnown RBP9.48□□□□□ -0.89
Vps39-202ENSMUST00000102501 Rtf1A2AQ19 715 aaKnown RBP9.48□□□□□ -0.89
Vps39-202ENSMUST00000102501 Mcm10Q0VBD2 885 aa9.48□□□□□ -0.89
Vps39-202ENSMUST00000102501 Ipo9Q91YE6 1041 aa9.47□□□□□ -0.89
Vps39-202ENSMUST00000102501 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.47□□□□□ -0.89
Vps39-202ENSMUST00000102501 Cdc42bpbQ7TT50 1713 aa9.47□□□□□ -0.89
Vps39-202ENSMUST00000102501 Ubap1lG3UW59 384 aa9.47□□□□□ -0.89
Vps39-202ENSMUST00000102501 Nectin2P32507 530 aa9.47□□□□□ -0.89
Vps39-202ENSMUST00000102501 Dot1lQ6XZL8 1540 aa9.47□□□□□ -0.89
Vps39-202ENSMUST00000102501 ChgaP26339 463 aaKnown RBP9.46□□□□□ -0.89
Vps39-202ENSMUST00000102501 Ccar1Q8CH18 1146 aaKnown RBP9.46□□□□□ -0.89
Vps39-202ENSMUST00000102501 Stk31Q99MW1 1018 aa9.46□□□□□ -0.89
Vps39-202ENSMUST00000102501 Rtn4Q99P72 1162 aaKnown RBP9.46□□□□□ -0.9
Vps39-202ENSMUST00000102501 NinlQ6ZQ12 1394 aa9.46□□□□□ -0.9
Vps39-202ENSMUST00000102501 Map7O88735 730 aa9.46□□□□□ -0.9
Vps39-202ENSMUST00000102501 TatQ8QZR1 454 aa9.46□□□□□ -0.9
Vps39-202ENSMUST00000102501 PalmQ9Z0P4 383 aa9.46□□□□□ -0.9
Vps39-202ENSMUST00000102501 Atp10aO54827 1508 aa9.45□□□□□ -0.9
Vps39-202ENSMUST00000102501 L3mbtl2P59178 703 aa9.45□□□□□ -0.9
Vps39-202ENSMUST00000102501 Dnai1Q8C0M8 701 aa9.45□□□□□ -0.9
Vps39-202ENSMUST00000102501 Slc12a5Q91V14 1138 aa9.45□□□□□ -0.9
Vps39-202ENSMUST00000102501 Acsbg1Q99PU5 721 aa9.45□□□□□ -0.9
Vps39-202ENSMUST00000102501 Cabp2Q9JLK4 216 aa9.45□□□□□ -0.9
Vps39-202ENSMUST00000102501 Dennd6aQ8BH65 605 aa9.45□□□□□ -0.9
Vps39-202ENSMUST00000102501 Ccdc60Q8C4J0 545 aa9.45□□□□□ -0.9
Vps39-202ENSMUST00000102501 Kidins220E9Q9B7 1793 aa9.45□□□□□ -0.9
Vps39-202ENSMUST00000102501 Ddx17Q501J6 650 aaKnown RBP9.45□□□□□ -0.9
Vps39-202ENSMUST00000102501 Ralbp1Q62172 648 aa9.45□□□□□ -0.9
Vps39-202ENSMUST00000102501 Nutm1Q8BHP2 1126 aa9.45□□□□□ -0.9
Vps39-202ENSMUST00000102501 Dusp27Q148W8 1138 aa9.44□□□□□ -0.9
Vps39-202ENSMUST00000102501 Talpid3E9PV87 1520 aa9.44□□□□□ -0.9
Vps39-202ENSMUST00000102501 Dip2cE9PWR4 1557 aa9.44□□□□□ -0.9
Vps39-202ENSMUST00000102501 Cul7Q8VE73 1689 aa9.43□□□□□ -0.9
Vps39-202ENSMUST00000102501 Q3TQI7 289 aaKnown RBP9.43□□□□□ -0.9
Vps39-202ENSMUST00000102501 Chmp4bQ9D8B3 224 aaKnown RBP9.43□□□□□ -0.9
Vps39-202ENSMUST00000102501 Trpm2Q91YD4 1506 aa9.43□□□□□ -0.9
Vps39-202ENSMUST00000102501 Tmem132eQ6IEE6 982 aa9.43□□□□□ -0.9
Vps39-202ENSMUST00000102501 Idi1P58044 227 aa9.43□□□□□ -0.9
Vps39-202ENSMUST00000102501 Ddx54Q8K4L0 874 aaKnown RBP9.43□□□□□ -0.9
Vps39-202ENSMUST00000102501 Pank1Q8K4K6 548 aa9.42□□□□□ -0.9
Vps39-202ENSMUST00000102501 Efcab6Q6P1E8 1516 aa9.42□□□□□ -0.9
Vps39-202ENSMUST00000102501 Lrrc7Q80TE7 1490 aa9.42□□□□□ -0.9
Vps39-202ENSMUST00000102501 Abca9Q8K449 1623 aa9.42□□□□□ -0.9
Vps39-202ENSMUST00000102501 Tulp4Q9JIL5 1547 aa9.42□□□□□ -0.9
Vps39-202ENSMUST00000102501 Ipo8Q7TMY7 1010 aa9.41□□□□□ -0.9
Vps39-202ENSMUST00000102501 Bcl2l13P59017 434 aa9.41□□□□□ -0.9
Vps39-202ENSMUST00000102501 Ccne1Q61457 408 aa9.41□□□□□ -0.9
Vps39-202ENSMUST00000102501 Htatsf1Q8BGC0 757 aa9.41□□□□□ -0.9
Vps39-202ENSMUST00000102501 Gm10471E9Q1C7 252 aa9.41□□□□□ -0.9
Vps39-202ENSMUST00000102501 Prkrip1Q9CWV6 186 aaKnown RBP9.41□□□□□ -0.9
Vps39-202ENSMUST00000102501 KnstrnQ9D9Z1 312 aaKnown RBP9.41□□□□□ -0.9
Vps39-202ENSMUST00000102501 Abca6Q8K441 1624 aa9.41□□□□□ -0.9
Vps39-202ENSMUST00000102501 Plcb2A3KGF7 1181 aa9.4□□□□□ -0.9
Vps39-202ENSMUST00000102501 CatipB9EKE5 520 aa9.4□□□□□ -0.9
Vps39-202ENSMUST00000102501 Spryd3E9Q9B3 442 aa9.4□□□□□ -0.9
Vps39-202ENSMUST00000102501 Myo3aQ8K3H5 1613 aa9.4□□□□□ -0.9
Vps39-202ENSMUST00000102501 Ggnbp2Q5SV77 696 aa9.4□□□□□ -0.9
Vps39-202ENSMUST00000102501 Idi2Q8BFZ6 227 aa9.4□□□□□ -0.9
Vps39-202ENSMUST00000102501 Kdm5cP41230 1554 aa9.4□□□□□ -0.9
Vps39-202ENSMUST00000102501 Plekhh1Q80TI1 1356 aa9.4□□□□□ -0.9
Vps39-202ENSMUST00000102501 Usp16Q99LG0 825 aa9.4□□□□□ -0.9
Vps39-202ENSMUST00000102501 Zfp777B9EKF4 885 aa9.4□□□□□ -0.91
Vps39-202ENSMUST00000102501 Mfap1aC0HKD8 439 aaKnown RBP9.4□□□□□ -0.91
Vps39-202ENSMUST00000102501 Mfap1bC0HKD9 439 aaKnown RBP9.4□□□□□ -0.91
Vps39-202ENSMUST00000102501 Cc2d1aQ8K1A6 943 aa9.4□□□□□ -0.91
Vps39-202ENSMUST00000102501 Ppip5k1A2ARP1 1436 aa9.39□□□□□ -0.91
Vps39-202ENSMUST00000102501 Map3k19E9Q3S4 1311 aa9.39□□□□□ -0.91
Vps39-202ENSMUST00000102501 IghaA0A0A6YXW6 389 aa9.39□□□□□ -0.91
Vps39-202ENSMUST00000102501 Zranb3Q6NZP1 1069 aa9.39□□□□□ -0.91
Vps39-202ENSMUST00000102501 Ccdc9Q8VC31 543 aaKnown RBP9.39□□□□□ -0.91
Vps39-202ENSMUST00000102501 PalldQ9ET54 1408 aa9.39□□□□□ -0.91
Vps39-202ENSMUST00000102501 Ercc6l2Q9JIM3 1537 aa9.39□□□□□ -0.91
Vps39-202ENSMUST00000102501 Gm21698A0A087WQP8 267 aa9.39□□□□□ -0.91
Vps39-202ENSMUST00000102501 Gm21671G3UY31 267 aa9.39□□□□□ -0.91
Vps39-202ENSMUST00000102501 Gas2l2Q5SSG4 860 aa9.39□□□□□ -0.91
Vps39-202ENSMUST00000102501 Q8BT18 775 aa9.39□□□□□ -0.91
Vps39-202ENSMUST00000102501 Setbp1Q9Z180 1582 aa9.38□□□□□ -0.91
Vps39-202ENSMUST00000102501 Rbm25B2RY56 838 aaKnown RBP9.38□□□□□ -0.91
Vps39-202ENSMUST00000102501 ShprhQ7TPQ3 1674 aa9.38□□□□□ -0.91
Vps39-202ENSMUST00000102501 AnkarA2RT91 1465 aa9.38□□□□□ -0.91
Vps39-202ENSMUST00000102501 Sirt1Q923E4 737 aa9.38□□□□□ -0.91
Vps39-202ENSMUST00000102501 Fhod3Q76LL6 1578 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 75.6 ms