RNA–Protein interactions for RNA: ENSMUST00000102501.9

Vps39-202, Transcript of Vam6/Vps39-like protein, mousemouse

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Gene Vps39, Length 4,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39-202ENSMUST00000102501 Rhox8Q6VSS7 320 aa13.84□□□□□ -0.19
Vps39-202ENSMUST00000102501 NischQ80TM9 1593 aa13.81□□□□□ -0.2
Vps39-202ENSMUST00000102501 Abcc9P70170 1546 aa13.12□□□□□ -0.31
Vps39-202ENSMUST00000102501 Abcc8B2RUS7 1588 aa13□□□□□ -0.33
Vps39-202ENSMUST00000102501 Gm35339A0A140LHH9 1649 aa12.89□□□□□ -0.35
Vps39-202ENSMUST00000102501 Ccdc136Q3TVA9 1136 aa12.76□□□□□ -0.37
Vps39-202ENSMUST00000102501 Esf1Q3V1V3 845 aaKnown RBP12.28□□□□□ -0.44
Vps39-202ENSMUST00000102501 Zcchc6Q5BLK4 1491 aaKnown RBP12.27□□□□□ -0.45
Vps39-202ENSMUST00000102501 Cngb1E1AZ71 1325 aa12.27□□□□□ -0.45
Vps39-202ENSMUST00000102501 Trim41Q5NCC3 630 aa12.19□□□□□ -0.46
Vps39-202ENSMUST00000102501 Ehmt2Q9Z148 1263 aaKnown RBP12.15□□□□□ -0.46
Vps39-202ENSMUST00000102501 Gab3Q8BSM5 595 aa12.09□□□□□ -0.47
Vps39-202ENSMUST00000102501 ScribQ80U72 1612 aa12.09□□□□□ -0.47
Vps39-202ENSMUST00000102501 Rb1cc1Q9ESK9 1588 aa12.07□□□□□ -0.48
Vps39-202ENSMUST00000102501 Kdm5dQ62240 1548 aa12.06□□□□□ -0.48
Vps39-202ENSMUST00000102501 NacadQ5SWP3 1504 aa12.05□□□□□ -0.48
Vps39-202ENSMUST00000102501 Rpgrip1Q9EPQ2 1331 aa11.96□□□□□ -0.49
Vps39-202ENSMUST00000102501 Ccdc180J3QNE4 1664 aa11.87□□□□□ -0.51
Vps39-202ENSMUST00000102501 Rtl1Q7M732 1744 aa11.86□□□□□ -0.51
Vps39-202ENSMUST00000102501 Il27Q8K3I6 234 aa11.85□□□□□ -0.51
Vps39-202ENSMUST00000102501 Baz1aO88379 1555 aa11.81□□□□□ -0.52
Vps39-202ENSMUST00000102501 Dcaf1Q80TR8 1506 aa11.79□□□□□ -0.52
Vps39-202ENSMUST00000102501 Myt1lP97500 1187 aa11.78□□□□□ -0.52
Vps39-202ENSMUST00000102501 Npm2Q80W85 207 aa11.75□□□□□ -0.53
Vps39-202ENSMUST00000102501 Zeb1Q64318 1117 aa11.72□□□□□ -0.53
Vps39-202ENSMUST00000102501 Sycp2Q9CUU3 1500 aa11.72□□□□□ -0.53
Vps39-202ENSMUST00000102501 HrcG5E8J6 738 aa11.69□□□□□ -0.54
Vps39-202ENSMUST00000102501 Chic1Q8CBW7 227 aa11.67□□□□□ -0.54
Vps39-202ENSMUST00000102501 Brd4Q9ESU6 1400 aaKnown RBP11.6□□□□□ -0.55
Vps39-202ENSMUST00000102501 Cecr2E9Q2Z1 1453 aa11.58□□□□□ -0.56
Vps39-202ENSMUST00000102501 Acin1Q9JIX8 1338 aaKnown RBP11.56□□□□□ -0.56
Vps39-202ENSMUST00000102501 Ubl4bQ9CQ84 188 aa11.48□□□□□ -0.57
Vps39-202ENSMUST00000102501 Npm1Q61937 292 aaKnown RBP11.43□□□□□ -0.58
Vps39-202ENSMUST00000102501 Ap3b1Q9Z1T1 1105 aa11.43□□□□□ -0.58
Vps39-202ENSMUST00000102501 UbtfP25976 765 aaKnown RBP11.42□□□□□ -0.58
Vps39-202ENSMUST00000102501 Crybg2B7ZCC2 1516 aa11.41□□□□□ -0.58
Vps39-202ENSMUST00000102501 Smarca2Q6DIC0 1577 aa11.39□□□□□ -0.59
Vps39-202ENSMUST00000102501 BicraF8VPZ9 1578 aa11.36□□□□□ -0.59
Vps39-202ENSMUST00000102501 Wdr66E9Q743 1299 aa11.36□□□□□ -0.59
Vps39-202ENSMUST00000102501 Rsf1E9PWW9 1441 aaKnown RBP11.33□□□□□ -0.6
Vps39-202ENSMUST00000102501 Golga3P55937 1487 aa11.33□□□□□ -0.6
Vps39-202ENSMUST00000102501 Las1lA2BE28 776 aaKnown RBP11.33□□□□□ -0.6
Vps39-202ENSMUST00000102501 CftrP26361 1476 aa11.32□□□□□ -0.6
Vps39-202ENSMUST00000102501 Pds5bQ4VA53 1446 aaKnown RBP11.31□□□□□ -0.6
Vps39-202ENSMUST00000102501 Kif15Q6P9L6 1387 aa11.29□□□□□ -0.6
Vps39-202ENSMUST00000102501 Ccdc88bQ4QRL3 1481 aa11.29□□□□□ -0.6
Vps39-202ENSMUST00000102501 Synj1Q8CHC4 1574 aa11.28□□□□□ -0.6
Vps39-202ENSMUST00000102501 Cep164Q5DU05 1446 aa11.27□□□□□ -0.61
Vps39-202ENSMUST00000102501 Ercc6F8VPZ5 1481 aa11.23□□□□□ -0.61
Vps39-202ENSMUST00000102501 Plekhg3Q4VAC9 1341 aa11.23□□□□□ -0.61
Vps39-202ENSMUST00000102501 Atad2bE9Q166 1460 aaKnown RBP11.22□□□□□ -0.61
Vps39-202ENSMUST00000102501 Ube2uB1AUC4 352 aa11.22□□□□□ -0.61
Vps39-202ENSMUST00000102501 NefmP08553 848 aa11.2□□□□□ -0.62
Vps39-202ENSMUST00000102501 Lmod2Q3UHZ5 550 aa11.19□□□□□ -0.62
Vps39-202ENSMUST00000102501 Dnajc5bQ9CQ94 199 aa11.19□□□□□ -0.62
Vps39-202ENSMUST00000102501 Smarca4Q3TKT4 1613 aaKnown RBP11.19□□□□□ -0.62
Vps39-202ENSMUST00000102501 Iqgap2Q3UQ44 1575 aa11.12□□□□□ -0.63
Vps39-202ENSMUST00000102501 Pcgf6Q99NA9 353 aa11.11□□□□□ -0.63
Vps39-202ENSMUST00000102501 Fam50aQ9WV03 339 aaKnown RBP11.08□□□□□ -0.64
Vps39-202ENSMUST00000102501 Fkbp15Q6P9Q6 1216 aaKnown RBP11.07□□□□□ -0.64
Vps39-202ENSMUST00000102501 Mier1Q5UAK0 511 aa11.05□□□□□ -0.64
Vps39-202ENSMUST00000102501 Ifnlr1Q8CGK5 535 aa11.05□□□□□ -0.64
Vps39-202ENSMUST00000102501 Phldb1Q6PDH0 1371 aaKnown RBP11.04□□□□□ -0.64
Vps39-202ENSMUST00000102501 Clip1Q922J3 1391 aa11.04□□□□□ -0.64
Vps39-202ENSMUST00000102501 Cux2P70298 1426 aa11.04□□□□□ -0.64
Vps39-202ENSMUST00000102501 Cttnbp2B9EJA2 1648 aa11.02□□□□□ -0.65
Vps39-202ENSMUST00000102501 Supt5hO55201 1082 aaKnown RBP11□□□□□ -0.65
Vps39-202ENSMUST00000102501 Frmpd1A2AKB4 1549 aa10.99□□□□□ -0.65
Vps39-202ENSMUST00000102501 Fmn1Q05860 1466 aa10.99□□□□□ -0.65
Vps39-202ENSMUST00000102501 Ccdc18Q640L5 1455 aa10.98□□□□□ -0.65
Vps39-202ENSMUST00000102501 Ppargc1bQ8VHJ7 1014 aa10.98□□□□□ -0.65
Vps39-202ENSMUST00000102501 Zbtb7cQ8VCZ7 619 aa10.92□□□□□ -0.66
Vps39-202ENSMUST00000102501 Setd5Q5XJV7 1441 aa10.91□□□□□ -0.66
Vps39-202ENSMUST00000102501 Eid3Q3V124 375 aa10.91□□□□□ -0.66
Vps39-202ENSMUST00000102501 Pelp1Q9DBD5 1123 aaKnown RBP10.9□□□□□ -0.66
Vps39-202ENSMUST00000102501 Rapgef2Q8CHG7 1496 aa10.9□□□□□ -0.67
Vps39-202ENSMUST00000102501 Cep162Q6ZQ06 1403 aa10.89□□□□□ -0.67
Vps39-202ENSMUST00000102501 Cc2d2aQ8CFW7 1633 aa10.87□□□□□ -0.67
Vps39-202ENSMUST00000102501 Arhgap27A2AB59 869 aa10.86□□□□□ -0.67
Vps39-202ENSMUST00000102501 BlmO88700 1416 aa10.85□□□□□ -0.67
Vps39-202ENSMUST00000102501 LrpprcQ6PB66 1392 aaKnown RBP10.84□□□□□ -0.67
Vps39-202ENSMUST00000102501 Wdr62Q3U3T8 1523 aa10.84□□□□□ -0.67
Vps39-202ENSMUST00000102501 Dhx29Q6PGC1 1365 aaKnown RBP10.83□□□□□ -0.68
Vps39-202ENSMUST00000102501 Neurod1Q60867 357 aa10.83□□□□□ -0.68
Vps39-202ENSMUST00000102501 TonslQ6NZL6 1363 aa10.83□□□□□ -0.68
Vps39-202ENSMUST00000102501 Chic2Q9D9G3 165 aa10.82□□□□□ -0.68
Vps39-202ENSMUST00000102501 Baz1bQ9Z277 1479 aa10.79□□□□□ -0.68
Vps39-202ENSMUST00000102501 Cdk11bP24788 784 aaKnown RBP10.78□□□□□ -0.68
Vps39-202ENSMUST00000102501 PtprkP35822 1457 aa10.78□□□□□ -0.68
Vps39-202ENSMUST00000102501 Eea1Q8BL66 1411 aa10.77□□□□□ -0.69
Vps39-202ENSMUST00000102501 NclP09405 707 aaKnown RBP10.75□□□□□ -0.69
Vps39-202ENSMUST00000102501 Nop58Q6DFW4 536 aaKnown RBP10.75□□□□□ -0.69
Vps39-202ENSMUST00000102501 Slc24a1Q91WD8 1130 aa10.73□□□□□ -0.69
Vps39-202ENSMUST00000102501 Top2bQ64511 1612 aa10.72□□□□□ -0.69
Vps39-202ENSMUST00000102501 Rad54l2Q99NG0 1466 aa10.72□□□□□ -0.69
Vps39-202ENSMUST00000102501 Aebp1Q640N1 1128 aa10.71□□□□□ -0.69
Vps39-202ENSMUST00000102501 Hnrnpul2Q00PI9 745 aaKnown RBP10.7□□□□□ -0.7
Vps39-202ENSMUST00000102501 Top2aQ01320 1528 aaKnown RBP10.7□□□□□ -0.7
Vps39-202ENSMUST00000102501 Plppr3Q7TPB0 716 aa10.69□□□□□ -0.7
Vps39-202ENSMUST00000102501 Sall2Q9QX96 1004 aa10.69□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 85.7 ms