RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Slc24a1Q91WD8 1130 aa27,5■■□□□ 1,99
Trim47-201ENSMUST00000021120 Asxl2Q8BZ32 1370 aa27,49■■□□□ 1,99
Trim47-201ENSMUST00000021120 Slit3Q9WVB4 1523 aa27,49■■□□□ 1,99
Trim47-201ENSMUST00000021120 Brwd3A2AHJ4 1799 aa27,45■■□□□ 1,99
Trim47-201ENSMUST00000021120 Wdr43Q6ZQL4 677 aaKnown RBP27,45■■□□□ 1,99
Trim47-201ENSMUST00000021120 Utp14aQ640M1 767 aaKnown RBP27,44■■□□□ 1,98
Trim47-201ENSMUST00000021120 PzpQ61838 1495 aa27,43■■□□□ 1,98
Trim47-201ENSMUST00000021120 IghaA0A0A6YXW6 389 aa27,43■■□□□ 1,98
Trim47-201ENSMUST00000021120 Cep170bQ80U49 1574 aa27,42■■□□□ 1,98
Trim47-201ENSMUST00000021120 Lmtk3Q5XJV6 1424 aa27,41■■□□□ 1,98
Trim47-201ENSMUST00000021120 Rimbp3Q3V0F0 1606 aa27,4■■□□□ 1,98
Trim47-201ENSMUST00000021120 Plekhg1F6S200 1446 aa27,39■■□□□ 1,98
Trim47-201ENSMUST00000021120 Ppp4r2Q0VGB7 417 aa27,39■■□□□ 1,97
Trim47-201ENSMUST00000021120 Slc4a2P13808 1237 aaKnown RBP27,37■■□□□ 1,97
Trim47-201ENSMUST00000021120 Scaf11E9PZM7 1456 aaKnown RBP27,37■■□□□ 1,97
Trim47-201ENSMUST00000021120 Rims2Q9EQZ7 1530 aa27,36■■□□□ 1,97
Trim47-201ENSMUST00000021120 CenpjQ569L8 1344 aa27,36■■□□□ 1,97
Trim47-201ENSMUST00000021120 Mrs2Q5NCE8 434 aa27,35■■□□□ 1,97
Trim47-201ENSMUST00000021120 Sbno1Q689Z5 1390 aa27,35■■□□□ 1,97
Trim47-201ENSMUST00000021120 Tubgcp6G5E8P0 1769 aa27,34■■□□□ 1,97
Trim47-201ENSMUST00000021120 Pik3r4Q8VD65 1358 aa27,33■■□□□ 1,97
Trim47-201ENSMUST00000021120 Cps1Q8C196 1500 aa27,32■■□□□ 1,96
Trim47-201ENSMUST00000021120 Gm16486A0A1D5RMD1 1434 aa27,32■■□□□ 1,96
Trim47-201ENSMUST00000021120 Abca14E9Q8F8 1683 aa27,32■■□□□ 1,96
Trim47-201ENSMUST00000021120 Arap3Q8R5G7 1538 aa27,32■■□□□ 1,96
Trim47-201ENSMUST00000021120 Phlpp1Q8CHE4 1687 aa27,31■■□□□ 1,96
Trim47-201ENSMUST00000021120 PrxO55103 1391 aa27,29■■□□□ 1,96
Trim47-201ENSMUST00000021120 Mink1Q9JM52 1308 aa27,28■■□□□ 1,96
Trim47-201ENSMUST00000021120 InsrP15208 1372 aa27,28■■□□□ 1,96
Trim47-201ENSMUST00000021120 Atp2b2Q9R0K7 1198 aa27,27■■□□□ 1,96
Trim47-201ENSMUST00000021120 Nwd1A6H603 1563 aa27,27■■□□□ 1,96
Trim47-201ENSMUST00000021120 Slc4a1apE9PX68 744 aa27,26■■□□□ 1,96
Trim47-201ENSMUST00000021120 Tmf1B9EKI3 1091 aa27,26■■□□□ 1,95
Trim47-201ENSMUST00000021120 PnisrA2AJT4 805 aaKnown RBP27,25■■□□□ 1,95
Trim47-201ENSMUST00000021120 Pank3Q8R2W9 370 aa27,24■■□□□ 1,95
Trim47-201ENSMUST00000021120 Eif5bQ05D44 1216 aaKnown RBP27,24■■□□□ 1,95
Trim47-201ENSMUST00000021120 Liat1Q810M6 228 aa27,24■■□□□ 1,95
Trim47-201ENSMUST00000021120 HnrnpmQ9D0E1 729 aaKnown RBP27,24■■□□□ 1,95
Trim47-201ENSMUST00000021120 Exoc6Q8R313 802 aa27,21■■□□□ 1,95
Trim47-201ENSMUST00000021120 Scn4aQ9ER60 1841 aa27,21■■□□□ 1,95
Trim47-201ENSMUST00000021120 Med1Q925J9 1575 aa27,21■■□□□ 1,95
Trim47-201ENSMUST00000021120 Fam184bQ0KK56 942 aa27,2■■□□□ 1,94
Trim47-201ENSMUST00000021120 Wwc2Q6NXJ0 1187 aa27,2■■□□□ 1,94
Trim47-201ENSMUST00000021120 NrdcQ8BHG1 1161 aa27,2■■□□□ 1,94
Trim47-201ENSMUST00000021120 Inpp5dQ9ES52 1191 aa27,18■■□□□ 1,94
Trim47-201ENSMUST00000021120 Cnga1P29974 684 aa27,16■■□□□ 1,94
Trim47-201ENSMUST00000021120 Exosc9Q9JHI7 438 aaKnown RBP27,16■■□□□ 1,94
Trim47-201ENSMUST00000021120 Usp32F8VPZ3 1604 aa27,16■■□□□ 1,94
Trim47-201ENSMUST00000021120 Rreb1Q3UH06 1700 aaKnown RBP27,15■■□□□ 1,94
Trim47-201ENSMUST00000021120 Gsto1O09131 240 aa27,13■■□□□ 1,93
Trim47-201ENSMUST00000021120 Zscan10Q3URR7 782 aa27,13■■□□□ 1,93
Trim47-201ENSMUST00000021120 Cdk19Q8BWD8 501 aa27,13■■□□□ 1,93
Trim47-201ENSMUST00000021120 Nrxn3Q6P9K9 1571 aa27,13■■□□□ 1,93
Trim47-201ENSMUST00000021120 NktrP30415 1453 aa27,13■■□□□ 1,93
Trim47-201ENSMUST00000021120 Thsd7aQ69ZU6 1645 aa27,12■■□□□ 1,93
Trim47-201ENSMUST00000021120 Pak3Q61036 559 aa27,12■■□□□ 1,93
Trim47-201ENSMUST00000021120 Egfem1Q8C088 590 aa27,1■■□□□ 1,93
Trim47-201ENSMUST00000021120 Kif20bQ80WE4 1774 aaKnown RBP27,1■■□□□ 1,93
Trim47-201ENSMUST00000021120 Pik3c2bE9QAN8 1632 aa27,08■■□□□ 1,93
Trim47-201ENSMUST00000021120 Q3UJC8 639 aa27,06■■□□□ 1,92
Trim47-201ENSMUST00000021120 FanciQ8K368 1330 aa27,06■■□□□ 1,92
Trim47-201ENSMUST00000021120 Zranb1Q7M760 708 aa27,06■■□□□ 1,92
Trim47-201ENSMUST00000021120 D430041D05RikF6ZGR6 1678 aa27,06■■□□□ 1,92
Trim47-201ENSMUST00000021120 Tns3Q5SSZ5 1440 aa27,04■■□□□ 1,92
Trim47-201ENSMUST00000021120 Fgd1P52734 960 aa27,02■■□□□ 1,92
Trim47-201ENSMUST00000021120 Pip4k2bQ80XI4 416 aa27,01■■□□□ 1,91
Trim47-201ENSMUST00000021120 Tnrc6bQ8BKI2 1810 aaKnown RBP26,99■■□□□ 1,91
Trim47-201ENSMUST00000021120 Tmem94Q7TSH8 1360 aa26,99■■□□□ 1,91
Trim47-201ENSMUST00000021120 Ltbp4Q8K4G1 1666 aa26,98■■□□□ 1,91
Trim47-201ENSMUST00000021120 Cyb5rlB1AS42 316 aa26,98■■□□□ 1,91
Trim47-201ENSMUST00000021120 Anp32bQ9EST5 272 aaKnown RBP26,98■■□□□ 1,91
Trim47-201ENSMUST00000021120 Unc13bQ9Z1N9 1602 aa26,97■■□□□ 1,91
Trim47-201ENSMUST00000021120 Nrxn1Q9CS84 1514 aa26,96■■□□□ 1,91
Trim47-201ENSMUST00000021120 Rapgef3Q8VCC8 918 aa26,96■■□□□ 1,91
Trim47-201ENSMUST00000021120 Dcaf11Q91VU6 549 aa26,96■■□□□ 1,91
Trim47-201ENSMUST00000021120 C5P06684 1680 aa26,96■■□□□ 1,91
Trim47-201ENSMUST00000021120 Adgrl1Q80TR1 1466 aa26,95■■□□□ 1,9
Trim47-201ENSMUST00000021120 Prdm10Q3UTQ7 1184 aa26,95■■□□□ 1,9
Trim47-201ENSMUST00000021120 Col14a1Q80X19 1797 aa26,95■■□□□ 1,9
Trim47-201ENSMUST00000021120 NalcnQ8BXR5 1738 aa26,93■■□□□ 1,9
Trim47-201ENSMUST00000021120 Znf316Q6PGE4 1016 aa26,93■■□□□ 1,9
Trim47-201ENSMUST00000021120 Ofd1Q80Z25 1017 aa26,93■■□□□ 1,9
Trim47-201ENSMUST00000021120 Als2Q920R0 1651 aa26,93■■□□□ 1,9
Trim47-201ENSMUST00000021120 Ccdc9Q8VC31 543 aaKnown RBP26,93■■□□□ 1,9
Trim47-201ENSMUST00000021120 Map3k19E9Q3S4 1311 aa26,92■■□□□ 1,9
Trim47-201ENSMUST00000021120 Sirt1Q923E4 737 aa26,92■■□□□ 1,9
Trim47-201ENSMUST00000021120 Kif7B7ZNG0 1348 aa26,91■■□□□ 1,9
Trim47-201ENSMUST00000021120 Gm10563F6WIE4 79 aa26,91■■□□□ 1,9
Trim47-201ENSMUST00000021120 Gprasp1Q5U4C1 1347 aa26,91■■□□□ 1,9
Trim47-201ENSMUST00000021120 Upf2A2AT37 1269 aaKnown RBP26,9■■□□□ 1,9
Trim47-201ENSMUST00000021120 Ccdc27Q3V036 639 aa26,9■■□□□ 1,9
Trim47-201ENSMUST00000021120 PtpruB1AUH1 1446 aa26,9■■□□□ 1,9
Trim47-201ENSMUST00000021120 N4bp2F8VQG7 1678 aaKnown RBP26,9■■□□□ 1,9
Trim47-201ENSMUST00000021120 C3P01027 1663 aa26,9■■□□□ 1,9
Trim47-201ENSMUST00000021120 L3mbtl2P59178 703 aa26,9■■□□□ 1,9
Trim47-201ENSMUST00000021120 Tcerg1Q8CGF7 1100 aaKnown RBP26,9■■□□□ 1,9
Trim47-201ENSMUST00000021120 Idi2Q8BFZ6 227 aa26,89■■□□□ 1,89
Trim47-201ENSMUST00000021120 Ipo9Q91YE6 1041 aa26,88■■□□□ 1,89
Trim47-201ENSMUST00000021120 Abcc10Q8R4P9 1501 aa26,88■■□□□ 1,89
Trim47-201ENSMUST00000021120 NinlQ6ZQ12 1394 aa26,84■■□□□ 1,89
Retrieved 100 of 22,080 RNA–protein pairs in 11,6 ms