RNA–Protein interactions for RNA: ENSMUST00000004507.10

Ddx56-201, Transcript of Probable ATP-dependent RNA helicase DDX56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx56, Length 1,956 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56-201ENSMUST00000004507 Itsn2Q9Z0R6 1659 aa15.1■□□□□ 0.01
Ddx56-201ENSMUST00000004507 Upf2A2AT37 1269 aaKnown RBP15.1■□□□□ 0.01
Ddx56-201ENSMUST00000004507 Q9D9H8 365 aa15.1■□□□□ 0.01
Ddx56-201ENSMUST00000004507 Puf60Q3UEB3 564 aaKnown RBP15.09■□□□□ 0.01
Ddx56-201ENSMUST00000004507 Q7TT23 1179 aa15.09■□□□□ 0.01
Ddx56-201ENSMUST00000004507 Slc52a2Q9D8F3 450 aa15.09■□□□□ 0.01
Ddx56-201ENSMUST00000004507 Asxl2Q8BZ32 1370 aa15.09■□□□□ 0.01
Ddx56-201ENSMUST00000004507 Sipa1l1Q8C0T5 1782 aa15.09■□□□□ 0.01
Ddx56-201ENSMUST00000004507 Mink1Q9JM52 1308 aa15.09■□□□□ 0.01
Ddx56-201ENSMUST00000004507 Tmf1B9EKI3 1091 aa15.09■□□□□ 0.01
Ddx56-201ENSMUST00000004507 Zfp444Q3TDV8 331 aaKnown RBP15.09■□□□□ 0.01
Ddx56-201ENSMUST00000004507 Zscan10Q3URR7 782 aa15.09■□□□□ 0.01
Ddx56-201ENSMUST00000004507 Liat1Q810M6 228 aa15.09■□□□□ 0.01
Ddx56-201ENSMUST00000004507 Inpp5dQ9ES52 1191 aa15.09■□□□□ 0.01
Ddx56-201ENSMUST00000004507 Erbb3Q61526 1339 aa15.08■□□□□ 0.01
Ddx56-201ENSMUST00000004507 IghaA0A0A6YXW6 389 aa15.07■□□□□ 0
Ddx56-201ENSMUST00000004507 Gm16486A0A1D5RMD1 1434 aa15.07■□□□□ 0
Ddx56-201ENSMUST00000004507 Rimbp3Q3V0F0 1606 aa15.06■□□□□ 0
Ddx56-201ENSMUST00000004507 Srcin1Q9QWI6 1250 aa15.06■□□□□ 0
Ddx56-201ENSMUST00000004507 Lrrc7Q80TE7 1490 aa15.06■□□□□ 0
Ddx56-201ENSMUST00000004507 Usp40Q8BWR4 1235 aa15.05■□□□□ 0
Ddx56-201ENSMUST00000004507 Dip2aQ8BWT5 1523 aa15.05■□□□□ 0
Ddx56-201ENSMUST00000004507 Scaf11E9PZM7 1456 aaKnown RBP15.05■□□□□ -0
Ddx56-201ENSMUST00000004507 Stk26Q99JT2 416 aa15.04■□□□□ -0
Ddx56-201ENSMUST00000004507 Scn4aQ9ER60 1841 aa15.03■□□□□ -0
Ddx56-201ENSMUST00000004507 MaddQ80U28 1577 aa15.03■□□□□ -0
Ddx56-201ENSMUST00000004507 Tcerg1Q8CGF7 1100 aaKnown RBP15.03■□□□□ -0
Ddx56-201ENSMUST00000004507 Slit3Q9WVB4 1523 aa15.03■□□□□ -0
Ddx56-201ENSMUST00000004507 PalldQ9ET54 1408 aa15.02■□□□□ -0
Ddx56-201ENSMUST00000004507 Rims2Q9EQZ7 1530 aa15.02■□□□□ -0
Ddx56-201ENSMUST00000004507 Phlpp1Q8CHE4 1687 aa15.02□□□□□ -0.01
Ddx56-201ENSMUST00000004507 DnmbpQ6TXD4 1580 aa15.01□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Nphp4P59240 1425 aa15.01□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Slc4a1apE9PX68 744 aa15.01□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Kcnh8P59111 1102 aa15.01□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Rab3gap2Q8BMG7 1366 aa15.01□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Ift172Q6VH22 1749 aa15.01□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Fam184bQ0KK56 942 aa15□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Pak3Q61036 559 aa15□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Gtf2e1Q9D0D5 440 aa15□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Stag3O70576 1240 aa15□□□□□ -0.01
Ddx56-201ENSMUST00000004507 PzpQ61838 1495 aa14.99□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Cyb5rlB1AS42 316 aa14.99□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Slc4a3P16283 1227 aa14.99□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Stard8Q8K031 1019 aa14.99□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Ttc41Q692V3 1318 aa14.99□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Utp14aQ640M1 767 aaKnown RBP14.98□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Ppp2r1aQ76MZ3 589 aa14.98□□□□□ -0.01
Ddx56-201ENSMUST00000004507 IqubQ8CDK3 788 aa14.98□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Atf7ipQ7TT18 1306 aa14.98□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Cep170bQ80U49 1574 aa14.98□□□□□ -0.01
Ddx56-201ENSMUST00000004507 TnikP83510 1323 aa14.98□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Egfem1Q8C088 590 aa14.98□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Lmtk3Q5XJV6 1424 aa14.97□□□□□ -0.01
Ddx56-201ENSMUST00000004507 NeflP08551 543 aa14.97□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Rad21Q61550 635 aaKnown RBP14.97□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Prkrip1Q9CWV6 186 aaKnown RBP14.97□□□□□ -0.01
Ddx56-201ENSMUST00000004507 Kif16bB1AVY7 1312 aa14.95□□□□□ -0.02
Ddx56-201ENSMUST00000004507 Esx1O88933 382 aa14.94□□□□□ -0.02
Ddx56-201ENSMUST00000004507 Pip4k2bQ80XI4 416 aa14.94□□□□□ -0.02
Ddx56-201ENSMUST00000004507 Pik3r4Q8VD65 1358 aa14.93□□□□□ -0.02
Ddx56-201ENSMUST00000004507 HnrnpmQ9D0E1 729 aaKnown RBP14.93□□□□□ -0.02
Ddx56-201ENSMUST00000004507 Med1Q925J9 1575 aa14.92□□□□□ -0.02
Ddx56-201ENSMUST00000004507 Cps1Q8C196 1500 aa14.91□□□□□ -0.02
Ddx56-201ENSMUST00000004507 Arap3Q8R5G7 1538 aa14.91□□□□□ -0.02
Ddx56-201ENSMUST00000004507 Mbd3Q9Z2D8 285 aaKnown RBP14.91□□□□□ -0.02
Ddx56-201ENSMUST00000004507 Abca14E9Q8F8 1683 aa14.91□□□□□ -0.02
Ddx56-201ENSMUST00000004507 Plekhg1F6S200 1446 aa14.91□□□□□ -0.02
Ddx56-201ENSMUST00000004507 Nrxn3Q6P9K9 1571 aa14.9□□□□□ -0.02
Ddx56-201ENSMUST00000004507 Kif7B7ZNG0 1348 aa14.89□□□□□ -0.03
Ddx56-201ENSMUST00000004507 Ltbp4Q8K4G1 1666 aa14.89□□□□□ -0.03
Ddx56-201ENSMUST00000004507 CrbnQ8C7D2 445 aa14.89□□□□□ -0.03
Ddx56-201ENSMUST00000004507 Thsd7aQ69ZU6 1645 aa14.89□□□□□ -0.03
Ddx56-201ENSMUST00000004507 Plekhh1Q80TI1 1356 aa14.88□□□□□ -0.03
Ddx56-201ENSMUST00000004507 Ipo9Q91YE6 1041 aa14.88□□□□□ -0.03
Ddx56-201ENSMUST00000004507 Atp2b2Q9R0K7 1198 aa14.88□□□□□ -0.03
Ddx56-201ENSMUST00000004507 CenpjQ569L8 1344 aa14.87□□□□□ -0.03
Ddx56-201ENSMUST00000004507 Nwd1A6H603 1563 aa14.87□□□□□ -0.03
Ddx56-201ENSMUST00000004507 Rapgef3Q8VCC8 918 aa14.85□□□□□ -0.03
Ddx56-201ENSMUST00000004507 Usp32F8VPZ3 1604 aa14.85□□□□□ -0.03
Ddx56-201ENSMUST00000004507 Gprasp1Q5U4C1 1347 aa14.85□□□□□ -0.03
Ddx56-201ENSMUST00000004507 Usp19Q3UJD6 1360 aa14.85□□□□□ -0.03
Ddx56-201ENSMUST00000004507 Kif20bQ80WE4 1774 aaKnown RBP14.84□□□□□ -0.03
Ddx56-201ENSMUST00000004507 Nlrp6Q91WS2 869 aa14.84□□□□□ -0.03
Ddx56-201ENSMUST00000004507 Rreb1Q3UH06 1700 aaKnown RBP14.83□□□□□ -0.03
Ddx56-201ENSMUST00000004507 Dcaf11Q91VU6 549 aa14.83□□□□□ -0.04
Ddx56-201ENSMUST00000004507 Rwdd1Q9CQK7 243 aa14.83□□□□□ -0.04
Ddx56-201ENSMUST00000004507 Tns3Q5SSZ5 1440 aa14.82□□□□□ -0.04
Ddx56-201ENSMUST00000004507 InsrP15208 1372 aa14.81□□□□□ -0.04
Ddx56-201ENSMUST00000004507 Cdk19Q8BWD8 501 aa14.81□□□□□ -0.04
Ddx56-201ENSMUST00000004507 Tmem94Q7TSH8 1360 aa14.8□□□□□ -0.04
Ddx56-201ENSMUST00000004507 Cnga1P29974 684 aa14.8□□□□□ -0.04
Ddx56-201ENSMUST00000004507 Q3UJC8 639 aa14.8□□□□□ -0.04
Ddx56-201ENSMUST00000004507 Zranb1Q7M760 708 aa14.8□□□□□ -0.04
Ddx56-201ENSMUST00000004507 KdrP35918 1367 aa14.8□□□□□ -0.04
Ddx56-201ENSMUST00000004507 Zmym3Q9JLM4 1370 aa14.8□□□□□ -0.04
Ddx56-201ENSMUST00000004507 Speer4f1Q9D5Q6 258 aa14.8□□□□□ -0.04
Ddx56-201ENSMUST00000004507 D430041D05RikF6ZGR6 1678 aa14.8□□□□□ -0.04
Ddx56-201ENSMUST00000004507 Pik3c2bE9QAN8 1632 aa14.8□□□□□ -0.04
Ddx56-201ENSMUST00000004507 Exosc9Q9JHI7 438 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms