RNA–Protein interactions for RNA: ENSMUST00000001818.4

Crnkl1-201, Transcript of Crooked neck-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Crnkl1, Length 3,428 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1-201ENSMUST00000001818 Arhgap23Q69ZH9 1483 aa10.01□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Mroh1E0CZ22 1640 aa10□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Aplp2Q06335 707 aa10□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Senp3Q9EP97 568 aaKnown RBP10□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Polr3glQ8R0C0 218 aa10□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Ap3b2Q9JME5 1082 aa10□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Rims1Q99NE5 1463 aa10□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Esx1O88933 382 aa10□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Rapgef3Q8VCC8 918 aa10□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Med14A2ABV5 1459 aaKnown RBP9.99□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 CrbnQ8C7D2 445 aa9.99□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 PalldQ9ET54 1408 aa9.99□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Birc3O08863 600 aa9.99□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Kcnh8P59111 1102 aa9.99□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Trim26Q99PN3 545 aa9.99□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Tcerg1Q8CGF7 1100 aaKnown RBP9.98□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Ino80Q6ZPV2 1559 aa9.98□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Kif7B7ZNG0 1348 aa9.98□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Nphp4P59240 1425 aa9.98□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 PzpQ61838 1495 aa9.98□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Abca8aQ8K442 1620 aa9.98□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Alpk3Q924C5 1678 aa9.98□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Bcl11bQ99PV8 884 aa9.97□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 PnisrA2AJT4 805 aaKnown RBP9.97□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 RictorQ6QI06 1708 aa9.97□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Atf3Q60765 181 aa9.97□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 Fam71e1A1L3C1 212 aa9.96□□□□□ -0.81
Crnkl1-201ENSMUST00000001818 FanciQ8K368 1330 aa9.95□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 Slain2Q8CI08 581 aa9.95□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 Ehbp1l1Q99MS7 1716 aa9.95□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 Iqgap1Q9JKF1 1657 aaKnown RBP9.95□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 Zscan21Q07231 555 aa9.94□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 Uggt1Q6P5E4 1551 aa9.94□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 GnpatP98192 678 aa9.94□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 Nolc1E9Q5C9 702 aaKnown RBP9.94□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 Kif13aQ9EQW7 1749 aa9.94□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 Scaf11E9PZM7 1456 aaKnown RBP9.93□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 Idi1P58044 227 aa9.93□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 Plin1Q8CGN5 517 aa9.92□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 Cabp4Q8VHC5 271 aa9.92□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 Cep170bQ80U49 1574 aa9.91□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 Cep152A2AUM9 1736 aaKnown RBP9.91□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 Gm21190A0A0G2JGJ6 266 aa9.91□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 Fyb1O35601 819 aa9.91□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 Kif16bB1AVY7 1312 aa9.9□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 InsrP15208 1372 aa9.9□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 Idi2Q8BFZ6 227 aa9.9□□□□□ -0.82
Crnkl1-201ENSMUST00000001818 L3mbtl2P59178 703 aa9.89□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Wdr43Q6ZQL4 677 aaKnown RBP9.89□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Itsn1Q9Z0R4 1714 aa9.89□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Bcl9Q9D219 1425 aa9.89□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Ppp2r1aQ76MZ3 589 aa9.89□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Dip2bQ3UH60 1574 aa9.89□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Map3k19E9Q3S4 1311 aa9.89□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Arhgef28P97433 1693 aa9.88□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 CatipB9EKE5 520 aa9.88□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Ddx17Q501J6 650 aaKnown RBP9.88□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Zfp444Q3TDV8 331 aaKnown RBP9.88□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Speer4f1Q9D5Q6 258 aa9.88□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Plxnc1Q9QZC2 1574 aa9.88□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Mak16Q8BGS0 296 aaKnown RBP9.88□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 NinlQ6ZQ12 1394 aa9.88□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Anp32aO35381 247 aa9.87□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 NeflP08551 543 aa9.87□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 U2af1Q9D883 239 aaKnown RBP9.87□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Pik3r4Q8VD65 1358 aa9.86□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Farp2Q91VS8 1065 aa9.86□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Plekhg1F6S200 1446 aa9.86□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Dbr1Q923B1 550 aa9.85□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Rims2Q9EQZ7 1530 aa9.85□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Tns3Q5SSZ5 1440 aa9.85□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Tsen2Q6P7W5 460 aa9.84□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Ggt6Q6PDE7 497 aa9.84□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 DiexfQ8BTT6 772 aaKnown RBP9.84□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Slc35g1Q8BY79 368 aa9.84□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Dip2aQ8BWT5 1523 aa9.84□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Cald1E9QA15 768 aaKnown RBP9.84□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Chd2E9PZM4 1827 aaKnown RBP9.84□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Topaz1E5FYH1 1653 aa9.84□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Sbno1Q689Z5 1390 aa9.84□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Cdk5rap2Q8K389 1822 aa9.84□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 Dennd6aQ8BH65 605 aa9.84□□□□□ -0.83
Crnkl1-201ENSMUST00000001818 PplQ9R269 1755 aa9.83□□□□□ -0.84
Crnkl1-201ENSMUST00000001818 B4galnt3Q6L8S8 986 aa9.83□□□□□ -0.84
Crnkl1-201ENSMUST00000001818 Gemin5Q8BX17 1502 aaKnown RBP9.83□□□□□ -0.84
Crnkl1-201ENSMUST00000001818 Zc3h13E9Q784 1729 aaKnown RBP9.83□□□□□ -0.84
Crnkl1-201ENSMUST00000001818 Armcx1Q9CX83 456 aa9.82□□□□□ -0.84
Crnkl1-201ENSMUST00000001818 ArxO35085 564 aa9.82□□□□□ -0.84
Crnkl1-201ENSMUST00000001818 Apaf1O88879 1249 aa9.82□□□□□ -0.84
Crnkl1-201ENSMUST00000001818 Acsbg1Q99PU5 721 aa9.82□□□□□ -0.84
Crnkl1-201ENSMUST00000001818 Rab3gap2Q8BMG7 1366 aa9.82□□□□□ -0.84
Crnkl1-201ENSMUST00000001818 GsdmaQ9EST1 446 aa9.82□□□□□ -0.84
Crnkl1-201ENSMUST00000001818 Gimap5Q8BWF2 308 aa9.81□□□□□ -0.84
Crnkl1-201ENSMUST00000001818 Gm16486A0A1D5RMD1 1434 aa9.81□□□□□ -0.84
Crnkl1-201ENSMUST00000001818 Brwd3A2AHJ4 1799 aa9.81□□□□□ -0.84
Crnkl1-201ENSMUST00000001818 TatQ8QZR1 454 aa9.8□□□□□ -0.84
Crnkl1-201ENSMUST00000001818 Golga2Q921M4 999 aa9.8□□□□□ -0.84
Crnkl1-201ENSMUST00000001818 Slit3Q9WVB4 1523 aa9.8□□□□□ -0.84
Crnkl1-201ENSMUST00000001818 Frmpd2A0A140LI67 1392 aa9.8□□□□□ -0.84
Crnkl1-201ENSMUST00000001818 Dixdc1Q80Y83 711 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms