RNA–Protein interactions for RNA: ENSMUST00000000619.7

Clcn4-201, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clcn4, Length 4,607 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-201ENSMUST00000000619 Rtf1A2AQ19 715 aaKnown RBP14.08□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Sox12Q04890 314 aa14.08□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Rsph4aQ8BYM7 716 aa14.08□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Ciz1Q8VEH2 845 aa14.08□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Slc52a2Q9D8F3 450 aa14.08□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Swt1Q9DBQ9 907 aa14.08□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Sbno1Q689Z5 1390 aa14.07□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Lrriq1Q0P5X1 1673 aa14.07□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Uspl1Q3ULM6 1089 aa14.07□□□□□ -0.16
Clcn4-201ENSMUST00000000619 PrkcshO08795 521 aa14.07□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Fam208aQ69ZR9 1610 aaKnown RBP14.07□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Ythdc2B2RR83 1445 aaKnown RBP14.06□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Abcc1O35379 1528 aa14.06□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Rabep1O35551 862 aa14.06□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Ccdc146E9Q9F7 977 aa14.06□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Edc4Q3UJB9 1406 aaKnown RBP14.06□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Dot1lQ6XZL8 1540 aa14.06□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Rrbp1Q99PL5 1605 aaKnown RBP14.05□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Ppip5k1A2ARP1 1436 aa14.05□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Stk31Q99MW1 1018 aa14.05□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Cdk19Q8BWD8 501 aa14.05□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Mast1Q9R1L5 1570 aa14.04□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Tnpo1Q8BFY9 898 aaKnown RBP14.04□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Tarbp1E9Q368 1579 aa14.04□□□□□ -0.16
Clcn4-201ENSMUST00000000619 FanciQ8K368 1330 aa14.04□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Zfp777B9EKF4 885 aa14.03□□□□□ -0.16
Clcn4-201ENSMUST00000000619 OvosQ3UU35 1456 aa14.03□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Usp16Q99LG0 825 aa14.03□□□□□ -0.16
Clcn4-201ENSMUST00000000619 PtmaP26350 111 aa14.03□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Zranb1Q7M760 708 aa14.03□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Afap1Q80YS6 731 aa14.03□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Gm16486A0A1D5RMD1 1434 aa14.02□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Hsp90b1P08113 802 aaKnown RBP14.02□□□□□ -0.16
Clcn4-201ENSMUST00000000619 Tex14Q7M6U3 1450 aa14.02□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Rfx1P48377 963 aa14.02□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Q3TQI7 289 aaKnown RBP14.02□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Gas2l2Q5SSG4 860 aa14.01□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Gnai1B2RSH2 354 aa14.01□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Gnai3Q9DC51 354 aa14.01□□□□□ -0.17
Clcn4-201ENSMUST00000000619 AU015836B2RUM3 263 aa14□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Tnnt1O88346 262 aa14□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Eif4g2Q62448 906 aaKnown RBP14□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Ccdc171E9Q1U1 1324 aa14□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Kif21bQ9QXL1 1668 aa14□□□□□ -0.17
Clcn4-201ENSMUST00000000619 SkilQ60665 675 aa14□□□□□ -0.17
Clcn4-201ENSMUST00000000619 PalmQ9Z0P4 383 aa13.99□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Kdm5cP41230 1554 aa13.99□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Trpm2Q91YD4 1506 aa13.99□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Triml2E9PW10 424 aa13.99□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Maco1Q7TQE6 664 aaKnown RBP13.98□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Ric3Q8BPM6 367 aa13.98□□□□□ -0.17
Clcn4-201ENSMUST00000000619 MyclP10166 368 aa13.97□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Kdm2bQ6P1G2 1309 aa13.97□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Duxf3A0A0N4SV92 674 aa13.97□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Cgnl1Q6AW69 1298 aa13.97□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Cc2d1aQ8K1A6 943 aa13.96□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Eif4g3Q80XI3 1579 aaKnown RBP13.96□□□□□ -0.17
Clcn4-201ENSMUST00000000619 Cabp4Q8VHC5 271 aa13.96□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Sptbn5F6UCX4 1208 aa13.95□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Cog6Q8R3I3 657 aa13.95□□□□□ -0.18
Clcn4-201ENSMUST00000000619 AatkQ80YE4 1365 aa13.95□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Rsph3aQ3UFY4 516 aa13.95□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Kif18aQ91WD7 886 aa13.95□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Cabp2Q9JLK4 216 aa13.94□□□□□ -0.18
Clcn4-201ENSMUST00000000619 TnikP83510 1323 aa13.94□□□□□ -0.18
Clcn4-201ENSMUST00000000619 IbtkQ6ZPR6 1352 aaKnown RBP13.94□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Nek4Q9Z1J2 792 aa13.94□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Gapvd1Q6PAR5 1458 aa13.93□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Slc12a5Q91V14 1138 aa13.93□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Dnmt1P13864 1620 aaKnown RBP13.93□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Cdc37l1Q9CZP7 335 aa13.93□□□□□ -0.18
Clcn4-201ENSMUST00000000619 InsrP15208 1372 aa13.93□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Cetn4Q8K4K1 168 aa13.93□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Nkx1-2P42580 305 aa13.92□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Ppp1r9bQ6R891 817 aaKnown RBP13.92□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Usp54Q8BL06 1588 aaKnown RBP13.92□□□□□ -0.18
Clcn4-201ENSMUST00000000619 MccE9PWI3 1003 aa13.92□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Nphp4P59240 1425 aa13.92□□□□□ -0.18
Clcn4-201ENSMUST00000000619 SlkO54988 1233 aa13.92□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Fchsd2Q3USJ8 740 aa13.92□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Znf608Q56A10 1511 aa13.91□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Pola1P33609 1465 aa13.91□□□□□ -0.18
Clcn4-201ENSMUST00000000619 MpripP97434 1024 aa13.91□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Tulp4Q9JIL5 1547 aa13.91□□□□□ -0.18
Clcn4-201ENSMUST00000000619 CastP51125 788 aa13.91□□□□□ -0.18
Clcn4-201ENSMUST00000000619 Gm21190A0A0G2JGJ6 266 aa13.89□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Ap3b2Q9JME5 1082 aa13.89□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Kif1bQ60575 1816 aaKnown RBP13.89□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Plekhm2Q80TQ5 1018 aa13.88□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Plch2A2AP18 1501 aa13.88□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Usp19Q3UJD6 1360 aa13.87□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Plcd4Q8K3R3 807 aa13.87□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Erich6bQ9D4S6 220 aa13.87□□□□□ -0.19
Clcn4-201ENSMUST00000000619 NinlQ6ZQ12 1394 aa13.87□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Casq1O09165 405 aa13.87□□□□□ -0.19
Clcn4-201ENSMUST00000000619 PalldQ9ET54 1408 aa13.87□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Stk11ipQ3TAA7 1072 aa13.87□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Rlbp1Q9Z275 317 aa13.87□□□□□ -0.19
Clcn4-201ENSMUST00000000619 Aldh1l1Q8R0Y6 902 aa13.86□□□□□ -0.19
Clcn4-201ENSMUST00000000619 MvpQ9EQK5 861 aa13.86□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms