RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C RPO21P04050 1733 aaKnown RBP0.64□□□□□ -2.31
SHU2YDR078C CUP1-1P0CX80 61 aa0.63□□□□□ -2.31
SHU2YDR078C CUP1-2P0CX81 61 aa0.63□□□□□ -2.31
SHU2YDR078C SDH6Q3E785 79 aa0.63□□□□□ -2.31
SHU2YDR078C HAP1P0CE41 1502 aa0.63□□□□□ -2.31
SHU2YDR078C TY2B-BQ12491 1770 aa0.62□□□□□ -2.31
SHU2YDR078C CHC1P22137 1653 aaKnown RBP0.62□□□□□ -2.31
SHU2YDR078C MMS22Q06164 1454 aa0.62□□□□□ -2.31
SHU2YDR078C YOR343CQ12484 108 aa0.62□□□□□ -2.31
SHU2YDR078C STU1P38198 1513 aa0.62□□□□□ -2.31
SHU2YDR078C TY3B-GQ99315 1547 aa0.62□□□□□ -2.31
SHU2YDR078C USO1P25386 1790 aa0.62□□□□□ -2.31
SHU2YDR078C GCN2P15442 1659 aa0.62□□□□□ -2.31
SHU2YDR078C MYO4P32492 1471 aa0.61□□□□□ -2.31
SHU2YDR078C IQG1Q12280 1495 aa0.61□□□□□ -2.31
SHU2YDR078C TY1B-JR2P47100 1755 aaKnown RBP0.61□□□□□ -2.31
SHU2YDR078C TY1B-ER2Q03619 1755 aa0.61□□□□□ -2.31
SHU2YDR078C TY1B-MR1Q04214 1755 aa0.61□□□□□ -2.31
SHU2YDR078C TY1B-MR2Q04670 1755 aaKnown RBP0.61□□□□□ -2.31
SHU2YDR078C TY1B-LR1Q12088 1755 aaKnown RBP0.61□□□□□ -2.31
SHU2YDR078C TY1B-NL1Q12112 1755 aa0.61□□□□□ -2.31
SHU2YDR078C TY1B-GR1Q12141 1755 aa0.61□□□□□ -2.31
SHU2YDR078C TY1B-DR3Q99231 1755 aa0.61□□□□□ -2.31
SHU2YDR078C VTH1P40438 1549 aa0.61□□□□□ -2.31
SHU2YDR078C VTH2P40890 1549 aa0.61□□□□□ -2.31
SHU2YDR078C VPS13Q07878 3144 aa0.61□□□□□ -2.31
SHU2YDR078C BUD3P25558 1636 aa0.6□□□□□ -2.31
SHU2YDR078C IML1P47170 1584 aa0.6□□□□□ -2.31
SHU2YDR078C NUM1Q00402 2748 aa0.59□□□□□ -2.31
SHU2YDR078C YBT1P32386 1661 aa0.59□□□□□ -2.31
SHU2YDR078C PDR12Q02785 1511 aa0.59□□□□□ -2.31
SHU2YDR078C VMR1P38735 1592 aa0.59□□□□□ -2.31
SHU2YDR078C NOP10Q6Q547 58 aaPredicted RBP0.59□□□□□ -2.31
SHU2YDR078C MLP2P40457 1679 aa0.59□□□□□ -2.32
SHU2YDR078C NUP188P52593 1655 aaKnown RBP0.59□□□□□ -2.32
SHU2YDR078C PDR5P33302 1511 aaKnown RBP0.59□□□□□ -2.32
SHU2YDR078C SNQ2P32568 1501 aaKnown RBP0.58□□□□□ -2.32
SHU2YDR078C TY1B-NL2Q99337 1749 aaKnown RBP0.57□□□□□ -2.32
SHU2YDR078C SMC4Q12267 1418 aa0.56□□□□□ -2.32
SHU2YDR078C CWP2P43497 92 aa0.56□□□□□ -2.32
SHU2YDR078C SGF11Q03067 99 aa0.56□□□□□ -2.32
SHU2YDR078C YKL068W-AQ3E826 78 aa0.56□□□□□ -2.32
SHU2YDR078C YDR034W-BQ6Q5X2 51 aa0.55□□□□□ -2.32
SHU2YDR078C YPR117WQ06116 2489 aa0.55□□□□□ -2.32
SHU2YDR078C YOR105WQ08504 108 aa0.54□□□□□ -2.32
SHU2YDR078C YIL156W-BQ2V2P4 73 aa0.54□□□□□ -2.32
SHU2YDR078C YCR085WP25650 117 aa0.53□□□□□ -2.32
SHU2YDR078C YPR108W-AQ3E7B3 70 aa0.53□□□□□ -2.32
SHU2YDR078C FIG2P25653 1609 aa0.52□□□□□ -2.33
SHU2YDR078C RRP5Q05022 1729 aaKnown RBP0.51□□□□□ -2.33
SHU2YDR078C IRA2P19158 3079 aa0.51□□□□□ -2.33
SHU2YDR078C TOR1P35169 2470 aa0.5□□□□□ -2.33
SHU2YDR078C IRA1P18963 3092 aa0.5□□□□□ -2.33
SHU2YDR078C POC4Q12245 148 aaPredicted RBP0.5□□□□□ -2.33
SHU2YDR078C YPR145C-AQ2V2P0 78 aa0.5□□□□□ -2.33
SHU2YDR078C YOL097W-AQ3E7Y9 61 aa0.5□□□□□ -2.33
SHU2YDR078C NUP192P47054 1683 aa0.49□□□□□ -2.33
SHU2YDR078C FKS3Q04952 1785 aa0.49□□□□□ -2.33
SHU2YDR078C TEL1P38110 2787 aa0.48□□□□□ -2.33
SHU2YDR078C YBR032WP38223 100 aa0.48□□□□□ -2.33
SHU2YDR078C EDC1P53080 175 aaPredicted RBP0.47□□□□□ -2.33
SHU2YDR078C YDR381C-AQ3E6R5 114 aa0.47□□□□□ -2.33
SHU2YDR078C DYN1P36022 4092 aa0.47□□□□□ -2.33
SHU2YDR078C MDN1Q12019 4910 aaKnown RBP0.47□□□□□ -2.33
SHU2YDR078C APC1P53886 1748 aa0.47□□□□□ -2.33
SHU2YDR078C YKL065W-AQ2V2P2 73 aa0.46□□□□□ -2.34
SHU2YDR078C HKR1P41809 1802 aa0.45□□□□□ -2.34
SHU2YDR078C FLO1P32768 1537 aa0.45□□□□□ -2.34
SHU2YDR078C YBR056W-AI2HB52 66 aa0.45□□□□□ -2.34
SHU2YDR078C TOR2P32600 2474 aaKnown RBP0.45□□□□□ -2.34
SHU2YDR078C TRA1P38811 3744 aa0.44□□□□□ -2.34
SHU2YDR078C ECM29P38737 1868 aa0.44□□□□□ -2.34
SHU2YDR078C YOR314WQ12506 109 aa0.44□□□□□ -2.34
SHU2YDR078C GCN1P33892 2672 aaKnown RBP0.43□□□□□ -2.34
SHU2YDR078C YGR025WP53216 100 aa0.42□□□□□ -2.34
SHU2YDR078C PMD1P32634 1753 aa0.41□□□□□ -2.34
SHU2YDR078C STT4P37297 1900 aa0.4□□□□□ -2.35
SHU2YDR078C YDL022C-AP0C5L6 82 aa0.39□□□□□ -2.35
SHU2YDR078C YCR108CQ3E819 63 aa0.39□□□□□ -2.35
SHU2YDR078C FMP27Q06179 2628 aa0.39□□□□□ -2.35
SHU2YDR078C CSF1Q12150 2958 aa0.39□□□□□ -2.35
SHU2YDR078C UTP20P35194 2493 aaKnown RBP0.38□□□□□ -2.35
SHU2YDR078C UTP10P42945 1769 aaKnown RBP0.38□□□□□ -2.35
SHU2YDR078C MOT1P32333 1867 aa0.37□□□□□ -2.35
SHU2YDR078C YDR524C-BQ3E6R4 66 aa0.37□□□□□ -2.35
SHU2YDR078C YBL044WP38194 122 aa0.34□□□□□ -2.36
SHU2YDR078C YIL046W-AQ3E7Z4 54 aa0.34□□□□□ -2.36
SHU2YDR078C QCR9P22289 66 aa0.33□□□□□ -2.36
SHU2YDR078C SWM2P40342 146 aa0.33□□□□□ -2.36
SHU2YDR078C YGR121W-AQ3E816 71 aa0.33□□□□□ -2.36
SHU2YDR078C SEN1Q00416 2231 aaKnown RBP0.33□□□□□ -2.36
SHU2YDR078C BPH1P25356 2167 aa0.32□□□□□ -2.36
SHU2YDR078C MEC1P38111 2368 aa0.3□□□□□ -2.36
SHU2YDR078C YDR246W-AQ3E763 66 aa0.29□□□□□ -2.36
SHU2YDR078C ATP17Q06405 101 aa0.27□□□□□ -2.37
SHU2YDR078C YGR035W-AQ45U48 73 aa0.25□□□□□ -2.37
SHU2YDR078C YDR119W-AQ2V2P9 66 aa0.24□□□□□ -2.37
SHU2YDR078C Q0297Q9ZZV8 51 aa0.24□□□□□ -2.37
SHU2YDR078C YLR146W-AQ2V2P1 62 aa0.23□□□□□ -2.37
SHU2YDR078C TIM12P32830 109 aa0.21□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms