RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 SLC40A1Q9NP59 571 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 KLC4Q9NSK0 619 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 FAM49BQ9NUQ9 324 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 GNEQ9Y223 722 aaKnown RBP20.14■□□□□ 0.81
UBXN1-215ENST00000533476 CLUHO75153 1309 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 FAM47DPA6NHR8 397 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 DYNC1LI2O43237 492 aaPredicted RBP20.14■□□□□ 0.81
UBXN1-215ENST00000533476 SNX3O60493 162 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 RECQL4O94761 1208 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 CYP2C9P11712 490 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 AXLP30530 894 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 STIP1P31948 543 aaKnown RBP20.14■□□□□ 0.81
UBXN1-215ENST00000533476 PHBP35232 272 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 GPX6P59796 221 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 GAD2Q05329 585 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 PDE4CQ08493 712 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 XRCC4Q13426 336 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 KRT81Q14533 505 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 CDO1Q16878 200 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 FNBP1LQ5T0N5 605 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 ANKMY2Q8IV38 441 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 MAGEB18Q96M61 343 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 RNF157Q96PX1 679 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 TBCBQ99426 244 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 NCAPGQ9BPX3 1015 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 NXF3Q9H4D5 531 aaKnown RBP20.14■□□□□ 0.81
UBXN1-215ENST00000533476 MLXIPLQ9NP71 852 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 UBQLN1Q9UMX0 589 aaKnown RBP20.14■□□□□ 0.81
UBXN1-215ENST00000533476 HES2Q9Y543 173 aa20.14■□□□□ 0.81
UBXN1-215ENST00000533476 POC1B-GALNT4F8VUJ3 575 aa20.13■□□□□ 0.81
UBXN1-215ENST00000533476 PRPF4O43172 522 aaKnown RBP eCLIP20.13■□□□□ 0.81
UBXN1-215ENST00000533476 BANF1O75531 89 aa20.13■□□□□ 0.81
UBXN1-215ENST00000533476 TMEM63AO94886 807 aa20.13■□□□□ 0.81
UBXN1-215ENST00000533476 TSHRP16473 764 aa20.13■□□□□ 0.81
UBXN1-215ENST00000533476 SDC4P31431 198 aa20.13■□□□□ 0.81
UBXN1-215ENST00000533476 STX2P32856 288 aa20.13■□□□□ 0.81
UBXN1-215ENST00000533476 GTF2A1P52655 376 aaPredicted RBP20.13■□□□□ 0.81
UBXN1-215ENST00000533476 SLC18A1P54219 525 aa20.13■□□□□ 0.81
UBXN1-215ENST00000533476 SOWAHAQ2M3V2 549 aa20.13■□□□□ 0.81
UBXN1-215ENST00000533476 SPRED3Q2MJR0 410 aa20.13■□□□□ 0.81
UBXN1-215ENST00000533476 MSS51Q4VC12 460 aa20.13■□□□□ 0.81
UBXN1-215ENST00000533476 NPNTQ6UXI9 565 aa20.13■□□□□ 0.81
UBXN1-215ENST00000533476 GDAP1Q8TB36 358 aa20.13■□□□□ 0.81
UBXN1-215ENST00000533476 PYROXD1Q8WU10 500 aa20.13■□□□□ 0.81
UBXN1-215ENST00000533476 KHSRPQ92945 711 aaKnown RBP eCLIP20.13■□□□□ 0.81
UBXN1-215ENST00000533476 FGFR1OP2Q9NVK5 253 aa20.13■□□□□ 0.81
UBXN1-215ENST00000533476 PSMC3IPQ9P2W1 217 aaPredicted RBP20.13■□□□□ 0.81
UBXN1-215ENST00000533476 PAPSS1O43252 624 aaPredicted RBP20.12■□□□□ 0.81
UBXN1-215ENST00000533476 DESP17661 470 aa20.12■□□□□ 0.81
UBXN1-215ENST00000533476 ATP11AP98196 1134 aa20.12■□□□□ 0.81
UBXN1-215ENST00000533476 MFSD10Q14728 455 aa20.12■□□□□ 0.81
UBXN1-215ENST00000533476 GLRA4Q5JXX5 417 aa20.12■□□□□ 0.81
UBXN1-215ENST00000533476 DARS2Q6PI48 645 aaKnown RBP20.12■□□□□ 0.81
UBXN1-215ENST00000533476 CAPN12Q6ZSI9 719 aa20.12■□□□□ 0.81
UBXN1-215ENST00000533476 OR6B3Q8NGW1 331 aa20.12■□□□□ 0.81
UBXN1-215ENST00000533476 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.12■□□□□ 0.81
UBXN1-215ENST00000533476 FAM172AQ8WUF8 416 aa20.12■□□□□ 0.81
UBXN1-215ENST00000533476 TRIM6Q9C030 488 aaPredicted RBP20.12■□□□□ 0.81
UBXN1-215ENST00000533476 TRABDQ9H4I3 376 aa20.12■□□□□ 0.81
UBXN1-215ENST00000533476 XPO7Q9UIA9 1087 aaKnown RBP20.12■□□□□ 0.81
UBXN1-215ENST00000533476 VGLL3A8MV65 326 aa20.12■□□□□ 0.81
UBXN1-215ENST00000533476 GABBR2O75899 941 aa20.12■□□□□ 0.81
UBXN1-215ENST00000533476 CD4P01730 458 aa20.12■□□□□ 0.81
UBXN1-215ENST00000533476 TGM2P21980 687 aa20.12■□□□□ 0.81
UBXN1-215ENST00000533476 GEMIN4P57678 1058 aaKnown RBP20.12■□□□□ 0.81
UBXN1-215ENST00000533476 RNASELQ05823 741 aaKnown RBP20.12■□□□□ 0.81
UBXN1-215ENST00000533476 MORN1Q5T089 497 aa20.12■□□□□ 0.81
UBXN1-215ENST00000533476 PDIK1LQ8N165 341 aa20.12■□□□□ 0.81
UBXN1-215ENST00000533476 TGS1Q96RS0 853 aaKnown RBP20.12■□□□□ 0.81
UBXN1-215ENST00000533476 TSPAN18Q96SJ8 248 aa20.12■□□□□ 0.81
UBXN1-215ENST00000533476 WDR83Q9BRX9 315 aaKnown RBP20.12■□□□□ 0.81
UBXN1-215ENST00000533476 NGRNQ9NPE2 291 aaKnown RBP20.12■□□□□ 0.81
UBXN1-215ENST00000533476 RABGEF1Q9UJ41 708 aa20.12■□□□□ 0.81
UBXN1-215ENST00000533476 GJD2Q9UKL4 321 aa20.12■□□□□ 0.81
UBXN1-215ENST00000533476 SMG5Q9UPR3 1016 aaKnown RBP20.12■□□□□ 0.81
UBXN1-215ENST00000533476 USP15Q9Y4E8 981 aaPredicted RBP20.12■□□□□ 0.81
UBXN1-215ENST00000533476 TCRBV7S3A2A0A539 114 aa20.11■□□□□ 0.81
UBXN1-215ENST00000533476 ZNF487B1APH4 448 aa20.11■□□□□ 0.81
UBXN1-215ENST00000533476 PIRO00625 290 aa20.11■□□□□ 0.81
UBXN1-215ENST00000533476 MDM4O15151 490 aa20.11■□□□□ 0.81
UBXN1-215ENST00000533476 IL4RP24394 825 aa20.11■□□□□ 0.81
UBXN1-215ENST00000533476 ADAM17P78536 824 aa20.11■□□□□ 0.81
UBXN1-215ENST00000533476 BASP1P80723 227 aaKnown RBP20.11■□□□□ 0.81
UBXN1-215ENST00000533476 PKN2Q16513 984 aaKnown RBP20.11■□□□□ 0.81
UBXN1-215ENST00000533476 FBXO47Q5MNV8 452 aa20.11■□□□□ 0.81
UBXN1-215ENST00000533476 NUGGCQ68CJ6 796 aa20.11■□□□□ 0.81
UBXN1-215ENST00000533476 SCUBE3Q8IX30 993 aa20.11■□□□□ 0.81
UBXN1-215ENST00000533476 PLD5Q8N7P1 536 aa20.11■□□□□ 0.81
UBXN1-215ENST00000533476 RTP4Q96DX8 246 aa20.11■□□□□ 0.81
UBXN1-215ENST00000533476 GPBP1L1Q9HC44 474 aaPredicted RBP20.11■□□□□ 0.81
UBXN1-215ENST00000533476 PCDH18Q9HCL0 1135 aa20.11■□□□□ 0.81
UBXN1-215ENST00000533476 A8MXQ7 604 aa20.1■□□□□ 0.81
UBXN1-215ENST00000533476 APOL1O14791 398 aa20.1■□□□□ 0.81
UBXN1-215ENST00000533476 KRT15P19012 456 aa20.1■□□□□ 0.81
UBXN1-215ENST00000533476 SCNN1AP37088 669 aa20.1■□□□□ 0.81
UBXN1-215ENST00000533476 PTPN9P43378 593 aa20.1■□□□□ 0.81
UBXN1-215ENST00000533476 MNAT1P51948 309 aa20.1■□□□□ 0.81
UBXN1-215ENST00000533476 IL9RQ01113 521 aa20.1■□□□□ 0.81
UBXN1-215ENST00000533476 BST2Q10589 180 aaKnown RBP20.1■□□□□ 0.81
UBXN1-215ENST00000533476 KLHL38Q2WGJ6 581 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms