RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 ABI2Q9NYB9 513 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-215ENST00000565559 UBQLN1Q9UMX0 589 aaKnown RBP11.99□□□□□ -0.49
CAPN3-215ENST00000565559 IGHV1OR15-9A0A0B4J2B8 117 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 A0A1B0GTW7 788 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 ANTXRLA6NF34 631 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-215ENST00000565559 B8ZZF3 427 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 EIF2DP41214 584 aaKnown RBP11.98□□□□□ -0.49
CAPN3-215ENST00000565559 GRIA2P42262 883 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 MATKP42679 507 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 PDE6CP51160 858 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 CDR1P51861 262 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 SEMG2Q02383 582 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 SRSF1Q07955 248 aaKnown RBP eCLIP11.98□□□□□ -0.49
CAPN3-215ENST00000565559 SLC10A6Q3KNW5 377 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 PREPLQ4J6C6 727 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-215ENST00000565559 CCDC157Q569K6 752 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 METTL23Q86XA0 190 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 SNX21Q969T3 373 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 SENP8Q96LD8 212 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 CYP2S1Q96SQ9 504 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 GAREM1Q9H706 876 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 PLEKHA5Q9HAU0 1116 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 DSEQ9UL01 958 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 CYP8B1Q9UNU6 501 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 KIF3AQ9Y496 699 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 PCDHGB2Q9Y5G2 931 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 AK5Q9Y6K8 562 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 PTPN13Q12923 2485 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 PTPRBP23467 1997 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 TRIP11Q15643 1979 aa11.98□□□□□ -0.49
CAPN3-215ENST00000565559 MYO16Q9Y6X6 1858 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 PTPRQQ9UMZ3 2332 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 GOLGA4Q13439 2230 aaKnown RBP11.97□□□□□ -0.49
CAPN3-215ENST00000565559 MEI4A8MW99 385 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 PYCARD-AS1I3L0S3 204 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 PLK4O00444 970 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 TNFSF14O43557 240 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 DTNBO60941 627 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 ADAM23O75077 832 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 CILPO75339 1184 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 SPATA31C1P0DKV0 1188 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 TCF3P15923 654 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 GABRG2P18507 467 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 PROZP22891 400 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 HNF1BP35680 557 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 TNFRSF4P43489 277 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 KIR2DL1P43626 348 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-215ENST00000565559 CXADRP78310 365 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 SPAG1Q07617 926 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 RESTQ13127 1097 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 TRIM29Q14134 588 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 NOLC1Q14978 699 aaKnown RBP eCLIP11.97□□□□□ -0.49
CAPN3-215ENST00000565559 TMPRSS12Q86WS5 348 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 CATSPER3Q86XQ3 398 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 DCP1BQ8IZD4 617 aaKnown RBP11.97□□□□□ -0.49
CAPN3-215ENST00000565559 FSIP1Q8NA03 581 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 ERMNQ8TAM6 284 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 WBP1Q96G27 269 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 ZNF419Q96HQ0 510 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-215ENST00000565559 ARHGEF4Q9NR80 690 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 DNMT3LQ9UJW3 386 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 PCDHB5Q9Y5E4 795 aa11.97□□□□□ -0.49
CAPN3-215ENST00000565559 PLXND1Q9Y4D7 1925 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 SLC9A3R1O14745 358 aaPredicted RBP11.96□□□□□ -0.49
CAPN3-215ENST00000565559 SLC28A2O43868 658 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 NEMFO60524 1076 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 CYP17A1P05093 508 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 CXCL8P10145 99 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 HOXB2P14652 356 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 IL12RB1P42701 662 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 SLC6A11P48066 632 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 LILRA4P59901 499 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 RPL10AP62906 217 aaKnown RBP11.96□□□□□ -0.49
CAPN3-215ENST00000565559 RHDQ02161 417 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 KDSRQ06136 332 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 PPP2R3AQ06190 1150 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 CUL4AQ13619 759 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 EMC10Q5UCC4 262 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 PCSK4Q6UW60 755 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 ARL14EPQ8N8R7 260 aaPredicted RBP11.96□□□□□ -0.49
CAPN3-215ENST00000565559 FAM184AQ8NB25 1140 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 SLC22A12Q96S37 553 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 IL21RQ9HBE5 538 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 BRMS1Q9HCU9 246 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 ZDHHC4Q9NPG8 344 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 GJB4Q9NTQ9 266 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 ARHGAP26Q9UNA1 814 aa11.96□□□□□ -0.49
CAPN3-215ENST00000565559 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.96□□□□□ -0.49
CAPN3-215ENST00000565559 PTPRDP23468 1912 aa11.96□□□□□ -0.5
CAPN3-215ENST00000565559 A0A0A0MRY4 1105 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 TBC1D3BA6NDS4 549 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 TLX3O43711 291 aaPredicted RBP11.95□□□□□ -0.5
CAPN3-215ENST00000565559 PRPF40AO75400 957 aaKnown RBP11.95□□□□□ -0.5
CAPN3-215ENST00000565559 MED24O75448 989 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 TOM1L1O75674 476 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 ADH1CP00326 375 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 CYP11A1P05108 521 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 C6P13671 934 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 HDCP19113 662 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms