RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W SFT2P38166 215 aa2.89□□□□□ -1.95
TSR1YDL060W DOG2P38773 246 aa2.89□□□□□ -1.95
TSR1YDL060W GGC1P38988 300 aa2.89□□□□□ -1.95
TSR1YDL060W YEL067CP39978 195 aa2.89□□□□□ -1.95
TSR1YDL060W CCS1P40202 249 aaKnown RBP2.89□□□□□ -1.95
TSR1YDL060W BRP1P53194 125 aa2.89□□□□□ -1.95
TSR1YDL060W HSK3P69852 69 aa2.89□□□□□ -1.95
TSR1YDL060W DGA1Q08650 418 aa2.89□□□□□ -1.95
TSR1YDL060W YPS3Q12303 508 aa2.89□□□□□ -1.95
TSR1YDL060W ATG40Q99325 256 aa2.89□□□□□ -1.95
TSR1YDL060W BPH1P25356 2167 aa2.89□□□□□ -1.95
TSR1YDL060W MDH2P22133 377 aa2.88□□□□□ -1.95
TSR1YDL060W SMP1P38128 452 aa2.88□□□□□ -1.95
TSR1YDL060W YAR068WP39564 161 aa2.88□□□□□ -1.95
TSR1YDL060W YGR269WP40326 108 aa2.88□□□□□ -1.95
TSR1YDL060W CWP2P43497 92 aa2.88□□□□□ -1.95
TSR1YDL060W TDA4P47153 279 aa2.88□□□□□ -1.95
TSR1YDL060W YIR021W-AQ3E739 70 aa2.88□□□□□ -1.95
TSR1YDL060W SEN1Q00416 2231 aaKnown RBP2.88□□□□□ -1.95
TSR1YDL060W TRA1P38811 3744 aa2.88□□□□□ -1.95
TSR1YDL060W YDL022C-AP0C5L6 82 aa2.88□□□□□ -1.95
TSR1YDL060W TIM12P32830 109 aa2.88□□□□□ -1.95
TSR1YDL060W YOR062CP36025 268 aa2.88□□□□□ -1.95
TSR1YDL060W YBR292CP38357 123 aa2.88□□□□□ -1.95
TSR1YDL060W MIG3P39943 394 aa2.88□□□□□ -1.95
TSR1YDL060W LST8P41318 303 aa2.88□□□□□ -1.95
TSR1YDL060W YFR054CP43622 192 aa2.88□□□□□ -1.95
TSR1YDL060W DSK2P48510 373 aa2.88□□□□□ -1.95
TSR1YDL060W POP3P53833 195 aaPredicted RBP2.88□□□□□ -1.95
TSR1YDL060W APS2Q00381 147 aa2.88□□□□□ -1.95
TSR1YDL060W VPS71Q03433 280 aa2.88□□□□□ -1.95
TSR1YDL060W PRP11Q07350 266 aaPredicted RBP2.88□□□□□ -1.95
TSR1YDL060W YOR105WQ08504 108 aa2.88□□□□□ -1.95
TSR1YDL060W YDL211CQ12121 372 aa2.88□□□□□ -1.95
TSR1YDL060W TIM22Q12328 207 aa2.88□□□□□ -1.95
TSR1YDL060W YBL059WP34224 193 aa2.87□□□□□ -1.95
TSR1YDL060W REE1P40893 198 aa2.87□□□□□ -1.95
TSR1YDL060W CUP9P41817 306 aa2.87□□□□□ -1.95
TSR1YDL060W YGR050CP53231 118 aa2.87□□□□□ -1.95
TSR1YDL060W MSB2P32334 1306 aa2.87□□□□□ -1.95
TSR1YDL060W FCY2P17064 533 aa2.87□□□□□ -1.95
TSR1YDL060W MRP49P32388 137 aa2.87□□□□□ -1.95
TSR1YDL060W FYV4P38783 130 aaPredicted RBP2.87□□□□□ -1.95
TSR1YDL060W APQ12P40532 138 aa2.87□□□□□ -1.95
TSR1YDL060W YIL014C-AQ02598 104 aa2.87□□□□□ -1.95
TSR1YDL060W SHH4Q06236 168 aa2.87□□□□□ -1.95
TSR1YDL060W YOR192C-CQ3E736 78 aa2.87□□□□□ -1.95
TSR1YDL060W HUG1Q6Q5K6 68 aa2.87□□□□□ -1.95
TSR1YDL060W YBL081WP38180 368 aaKnown RBP2.86□□□□□ -1.95
TSR1YDL060W RPB11P38902 120 aa2.86□□□□□ -1.95
TSR1YDL060W YDR042CQ03205 200 aa2.86□□□□□ -1.95
TSR1YDL060W MIX17Q03667 156 aa2.86□□□□□ -1.95
TSR1YDL060W YOL029CQ08187 201 aa2.86□□□□□ -1.95
TSR1YDL060W TAO3P40468 2376 aa2.86□□□□□ -1.95
TSR1YDL060W FZF1P32805 299 aa2.86□□□□□ -1.95
TSR1YDL060W KRE9P39005 276 aa2.86□□□□□ -1.95
TSR1YDL060W GLE2P40066 365 aa2.86□□□□□ -1.95
TSR1YDL060W IGD1P43598 195 aa2.86□□□□□ -1.95
TSR1YDL060W ECM19Q06011 112 aa2.86□□□□□ -1.95
TSR1YDL060W XPT1P47165 209 aa2.85□□□□□ -1.95
TSR1YDL060W YGL118CP53132 145 aa2.85□□□□□ -1.95
TSR1YDL060W CAX4P53223 239 aa2.85□□□□□ -1.95
TSR1YDL060W FIT3Q08907 204 aa2.85□□□□□ -1.95
TSR1YDL060W YDR119W-AQ2V2P9 66 aa2.85□□□□□ -1.95
TSR1YDL060W TDA8Q6B2U8 126 aa2.85□□□□□ -1.95
TSR1YDL060W MSA2P36157 363 aa2.85□□□□□ -1.95
TSR1YDL060W NRG2P38082 220 aa2.85□□□□□ -1.95
TSR1YDL060W ATX1P38636 73 aa2.85□□□□□ -1.95
TSR1YDL060W RIM9Q04734 239 aa2.85□□□□□ -1.95
TSR1YDL060W YDL180WQ12301 547 aa2.85□□□□□ -1.95
TSR1YDL060W SRX1P36077 127 aa2.84□□□□□ -1.95
TSR1YDL060W GPI2P46961 280 aa2.84□□□□□ -1.95
TSR1YDL060W KNH1P50112 268 aa2.84□□□□□ -1.95
TSR1YDL060W NIP7Q08962 181 aaKnown RBP2.84□□□□□ -1.95
TSR1YDL060W HTL1Q9URQ5 78 aa2.84□□□□□ -1.95
TSR1YDL060W FAB1P34756 2278 aa2.84□□□□□ -1.96
TSR1YDL060W RPB9P27999 122 aa2.83□□□□□ -1.96
TSR1YDL060W SRP21P32342 167 aa2.83□□□□□ -1.96
TSR1YDL060W RPA12P32529 125 aaKnown RBP2.83□□□□□ -1.96
TSR1YDL060W VTC1P40046 129 aaRIP-Chip data2.83□□□□□ -1.96not detected
TSR1YDL060W VPS55P47111 140 aa2.83□□□□□ -1.96
TSR1YDL060W SMT3Q12306 101 aaKnown RBP2.83□□□□□ -1.96
TSR1YDL060W RAV2Q03956 351 aa2.83□□□□□ -1.96
TSR1YDL060W MIC27P50945 234 aa2.82□□□□□ -1.96
TSR1YDL060W TOM7P53507 60 aa2.82□□□□□ -1.96
TSR1YDL060W YHP1Q04116 353 aa2.82□□□□□ -1.96
TSR1YDL060W YPL264CQ08980 353 aa2.82□□□□□ -1.96
TSR1YDL060W YAL067W-AQ8TGK6 75 aa2.82□□□□□ -1.96
TSR1YDL060W YFR032C-BQ8TGU2 87 aa2.82□□□□□ -1.96
TSR1YDL060W RPB7P34087 171 aa2.82□□□□□ -1.96
TSR1YDL060W RRT13P40042 185 aa2.82□□□□□ -1.96
TSR1YDL060W CIS3P47001 227 aa2.82□□□□□ -1.96
TSR1YDL060W PGU1P47180 361 aa2.82□□□□□ -1.96
TSR1YDL060W MPD1Q12404 318 aaKnown RBP2.82□□□□□ -1.96
TSR1YDL060W UBC5P15732 148 aa2.81□□□□□ -1.96
TSR1YDL060W YHR180WP38868 163 aa2.81□□□□□ -1.96
TSR1YDL060W YNR077CP53758 84 aa2.81□□□□□ -1.96
TSR1YDL060W YDR524C-BQ3E6R4 66 aa2.81□□□□□ -1.96
TSR1YDL060W LDB16P25587 256 aa2.81□□□□□ -1.96
TSR1YDL060W VMA11P32842 164 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 62 ms