RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 TTC9BQ8N6N2 239 aa17.02■□□□□ 0.32
BRK1-201ENST00000530758 ANKRD52Q8NB46 1076 aa17.02■□□□□ 0.32
BRK1-201ENST00000530758 SMRP1Q8NCR6 262 aa17.02■□□□□ 0.32
BRK1-201ENST00000530758 SLC2A14Q8TDB8 520 aa17.02■□□□□ 0.32
BRK1-201ENST00000530758 BAP1Q92560 729 aa17.02■□□□□ 0.32
BRK1-201ENST00000530758 SMARCD1Q96GM5 515 aa17.02■□□□□ 0.32
BRK1-201ENST00000530758 SPATA17Q96L03 361 aa17.02■□□□□ 0.32
BRK1-201ENST00000530758 PCMTD1Q96MG8 357 aaPredicted RBP17.02■□□□□ 0.32
BRK1-201ENST00000530758 ZSWIM1Q9BR11 485 aa17.02■□□□□ 0.32
BRK1-201ENST00000530758 DUSP16Q9BY84 665 aa17.02■□□□□ 0.32
BRK1-201ENST00000530758 UBXN6Q9BZV1 441 aa17.02■□□□□ 0.32
BRK1-201ENST00000530758 ZNF518BQ9C0D4 1074 aa17.02■□□□□ 0.32
BRK1-201ENST00000530758 YIPF1Q9Y548 306 aa17.02■□□□□ 0.32
BRK1-201ENST00000530758 PATJQ8NI35 1801 aa17.02■□□□□ 0.31
BRK1-201ENST00000530758 ZNF638Q14966 1978 aaKnown RBP17.02■□□□□ 0.31
BRK1-201ENST00000530758 ATP8B3O60423 1300 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 A0A1W2PQJ5 194 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 O00370 1275 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 CLDN5O00501 218 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 KRT5P13647 590 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 CCDC130P13994 396 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 ATF6P18850 670 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 ALDH1A3P47895 512 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 TWF1Q12792 350 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 RAPGEF1Q13905 1077 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 MGAT5BQ3V5L5 792 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 LEXMQ3ZCV2 418 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 PKDCCQ504Y2 493 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 ZNF606Q8WXB4 792 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 TFAP2BQ92481 460 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 NLRC4Q9NPP4 1024 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 AVENQ9NQS1 362 aaPredicted RBP17.01■□□□□ 0.31
BRK1-201ENST00000530758 FAM49BQ9NUQ9 324 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 TMEM30AQ9NV96 361 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 CD207Q9UJ71 328 aa17.01■□□□□ 0.31
BRK1-201ENST00000530758 DENND4CQ5VZ89 1909 aa17■□□□□ 0.31
BRK1-201ENST00000530758 TRIM66O15016 1216 aa17■□□□□ 0.31
BRK1-201ENST00000530758 CYP26A1O43174 497 aa17■□□□□ 0.31
BRK1-201ENST00000530758 LRG1P02750 347 aa17■□□□□ 0.31
BRK1-201ENST00000530758 SOX5P35711 763 aa17■□□□□ 0.31
BRK1-201ENST00000530758 STAT1P42224 750 aa17■□□□□ 0.31
BRK1-201ENST00000530758 CACNA2D1P54289 1103 aa17■□□□□ 0.31
BRK1-201ENST00000530758 EPHB3P54753 998 aa17■□□□□ 0.31
BRK1-201ENST00000530758 EPHA5P54756 1037 aa17■□□□□ 0.31
BRK1-201ENST00000530758 PTK2Q05397 1052 aa17■□□□□ 0.31
BRK1-201ENST00000530758 PTPN21Q16825 1174 aa17■□□□□ 0.31
BRK1-201ENST00000530758 VSTM4Q8IW00 320 aa17■□□□□ 0.31
BRK1-201ENST00000530758 C12orf76Q8N812 135 aaPredicted RBP17■□□□□ 0.31
BRK1-201ENST00000530758 ZMIZ2Q8NF64 920 aa17■□□□□ 0.31
BRK1-201ENST00000530758 SUSD6Q92537 303 aa17■□□□□ 0.31
BRK1-201ENST00000530758 PSMG2Q969U7 264 aa17■□□□□ 0.31
BRK1-201ENST00000530758 SPAG5Q96R06 1193 aa17■□□□□ 0.31
BRK1-201ENST00000530758 SMOQ99835 787 aa17■□□□□ 0.31
BRK1-201ENST00000530758 LRRC3Q9BY71 257 aa17■□□□□ 0.31
BRK1-201ENST00000530758 PNPLA8Q9NP80 782 aa17■□□□□ 0.31
BRK1-201ENST00000530758 IL37Q9NZH6 218 aa17■□□□□ 0.31
BRK1-201ENST00000530758 TNFRSF10BO14763 440 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 XYLBO75191 536 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 FAM200BP0CF97 657 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 CD19P15391 556 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 NPR3P17342 541 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 PTPN2P17706 415 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 KCNA5P22460 613 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 GRIK1P39086 918 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 DDR2Q16832 855 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 PUS10Q3MIT2 529 aaKnown RBP16.99■□□□□ 0.31
BRK1-201ENST00000530758 RARS2Q5T160 578 aaKnown RBP16.99■□□□□ 0.31
BRK1-201ENST00000530758 SPECC1LQ69YQ0 1117 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 CES5AQ6NT32 575 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 TMC5Q6UXY8 1006 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 CLEC20AQ6ZU45 233 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 CACNA2D4Q7Z3S7 1137 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 DNAJB7Q7Z6W7 309 aaPredicted RBP16.99■□□□□ 0.31
BRK1-201ENST00000530758 FMNL3Q8IVF7 1028 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.99■□□□□ 0.31
BRK1-201ENST00000530758 MRFAP1L1Q96HT8 127 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 MYRFLQ96LU7 910 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 ZNF512Q96ME7 567 aaPredicted RBP16.99■□□□□ 0.31
BRK1-201ENST00000530758 KCNK16Q96T55 309 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 UHRF1Q96T88 793 aaPredicted RBP16.99■□□□□ 0.31
BRK1-201ENST00000530758 SEPT5Q99719 369 aaPredicted RBP16.99■□□□□ 0.31
BRK1-201ENST00000530758 MED10Q9BTT4 135 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 TRIM5Q9C035 493 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 DMAP1Q9NPF5 467 aaPredicted RBP16.99■□□□□ 0.31
BRK1-201ENST00000530758 COMMD8Q9NX08 183 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 AIPL1Q9NZN9 384 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 TSPAN16Q9UKR8 245 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 CAPN11Q9UMQ6 739 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 PCDHGC3Q9UN70 934 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.99■□□□□ 0.31
BRK1-201ENST00000530758 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.99■□□□□ 0.31
BRK1-201ENST00000530758 DENND4AQ7Z401 1863 aa16.99■□□□□ 0.31
BRK1-201ENST00000530758 HHLA1C9JL84 531 aa16.98■□□□□ 0.31
BRK1-201ENST00000530758 F8VP50 259 aa16.98■□□□□ 0.31
BRK1-201ENST00000530758 CCL16O15467 120 aa16.98■□□□□ 0.31
BRK1-201ENST00000530758 MED7O43513 233 aa16.98■□□□□ 0.31
BRK1-201ENST00000530758 AP1G2O75843 785 aa16.98■□□□□ 0.31
BRK1-201ENST00000530758 SOAT2O75908 522 aa16.98■□□□□ 0.31
BRK1-201ENST00000530758 BEST1O76090 585 aa16.98■□□□□ 0.31
BRK1-201ENST00000530758 PNMA6AP0CW24 399 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms