RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 SHOC2Q9UQ13 582 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 MRPS17Q9Y2R5 130 aaKnown RBP4.04□□□□□ -1.76
VPS8-215ENST00000460158 PAXBP1Q9Y5B6 917 aa4.04□□□□□ -1.76
VPS8-215ENST00000460158 H7C4K7 107 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 TRIAP1O43715 76 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 ANXA2P07355 339 aaKnown RBP4.03□□□□□ -1.76
VPS8-215ENST00000460158 HSP90AA1P07900 732 aaKnown RBP4.03□□□□□ -1.76
VPS8-215ENST00000460158 TXNP10599 105 aaKnown RBP4.03□□□□□ -1.76
VPS8-215ENST00000460158 MAKP20794 623 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 LRPAP1P30533 357 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 CARSP49589 748 aaKnown RBP4.03□□□□□ -1.76
VPS8-215ENST00000460158 INHBCP55103 352 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 KRT17Q04695 432 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 MYO1EQ12965 1108 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 BRD3Q15059 726 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 PTPAQ15257 358 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 ARHGAP40Q5TG30 622 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 HIBCHQ6NVY1 386 aaPredicted RBP4.03□□□□□ -1.76
VPS8-215ENST00000460158 XRRA1Q6P2D8 792 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 CLEC4GQ6UXB4 293 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 KCTD20Q7Z5Y7 419 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 MORC1Q86VD1 984 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 SKAP1Q86WV1 359 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 VRK3Q8IV63 474 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 FAM186BQ8IYM0 893 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 LNX2Q8N448 690 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 FAM109AQ8N4B1 249 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 OR2C3Q8N628 320 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 ATP11CQ8NB49 1132 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 SGCZQ96LD1 299 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 Q96MF0 132 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 OSBPL9Q96SU4 736 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 PTDSS2Q9BVG9 487 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 ACTRT3Q9BYD9 372 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 TPSD1Q9BZJ3 242 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 TMX4Q9H1E5 349 aaPredicted RBP4.03□□□□□ -1.76
VPS8-215ENST00000460158 IKZF4Q9H2S9 585 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 CXorf36Q9H7Y0 433 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 NLRC4Q9NPP4 1024 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 CASS4Q9NQ75 786 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 XPNPEP3Q9NQH7 507 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 STARD7Q9NQZ5 370 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 TBC1D23Q9NUY8 699 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 MID2Q9UJV3 735 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 SERTAD3Q9UJW9 196 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 HDAC9Q9UKV0 1011 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 NDRG4Q9ULP0 352 aaKnown RBP4.03□□□□□ -1.76
VPS8-215ENST00000460158 SSX2IPQ9Y2D8 614 aa4.03□□□□□ -1.76
VPS8-215ENST00000460158 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.03□□□□□ -1.76
VPS8-215ENST00000460158 KAT6BQ8WYB5 2073 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 A0A1W2PPC4 97 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 RAB27BO00194 218 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 APOL1O14791 398 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 PDHA1P08559 390 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 SRGNP10124 158 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 FGFR2P21802 821 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 DGKEP52429 567 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 SP2Q02086 613 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 SLC29A2Q14542 456 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 MGAT5BQ3V5L5 792 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 ABHD17BQ5VST6 288 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 RRAGBQ5VZM2 374 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 RGS7BPQ6MZT1 257 aaPredicted RBP4.02□□□□□ -1.77
VPS8-215ENST00000460158 RNF44Q7L0R7 432 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 SAMD3Q8N6K7 520 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 MYCBPAPQ8TBZ2 947 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 BPIFB1Q8TDL5 484 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 PPP2R3CQ969Q6 453 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 KIAA1191Q96A73 305 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 FAM136AQ96C01 138 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 IQCDQ96DY2 449 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 PPP1R9BQ96SB3 815 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 NELL2Q99435 816 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 NAP1L4Q99733 375 aaKnown RBP4.02□□□□□ -1.77
VPS8-215ENST00000460158 COLEC11Q9BWP8 271 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 AS3MTQ9HBK9 375 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 SERHLQ9NQF3 203 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 ZSCAN32Q9NX65 697 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 MYO1AQ9UBC5 1043 aa4.02□□□□□ -1.77
VPS8-215ENST00000460158 COL4A3Q01955 1670 aa4.01□□□□□ -1.77
VPS8-215ENST00000460158 LOC102723971A0A1B0GUV8 181 aa4.01□□□□□ -1.77
VPS8-215ENST00000460158 CCDC189A1A4V9 331 aa4.01□□□□□ -1.77
VPS8-215ENST00000460158 CCER2I3L3R5 266 aa4.01□□□□□ -1.77
VPS8-215ENST00000460158 PPM1DO15297 605 aa4.01□□□□□ -1.77
VPS8-215ENST00000460158 THAP12O43422 761 aa4.01□□□□□ -1.77
VPS8-215ENST00000460158 ERBB2P04626 1255 aa4.01□□□□□ -1.77
VPS8-215ENST00000460158 PTMAP06454 111 aaKnown RBP4.01□□□□□ -1.77
VPS8-215ENST00000460158 RHOP08100 348 aa4.01□□□□□ -1.77
VPS8-215ENST00000460158 ADH4P08319 380 aa4.01□□□□□ -1.77
VPS8-215ENST00000460158 HARSP12081 509 aaKnown RBP4.01□□□□□ -1.77
VPS8-215ENST00000460158 BTF3P20290 206 aaKnown RBP4.01□□□□□ -1.77
VPS8-215ENST00000460158 KCNA3P22001 575 aa4.01□□□□□ -1.77
VPS8-215ENST00000460158 ACVR2AP27037 513 aa4.01□□□□□ -1.77
VPS8-215ENST00000460158 IL1R2P27930 398 aa4.01□□□□□ -1.77
VPS8-215ENST00000460158 PPIFP30405 207 aaKnown RBP4.01□□□□□ -1.77
VPS8-215ENST00000460158 HTR3AP46098 478 aa4.01□□□□□ -1.77
VPS8-215ENST00000460158 PTDSS1P48651 473 aaKnown RBP4.01□□□□□ -1.77
VPS8-215ENST00000460158 ITGA8P53708 1063 aa4.01□□□□□ -1.77
VPS8-215ENST00000460158 SATB1Q01826 763 aa4.01□□□□□ -1.77
VPS8-215ENST00000460158 PMS2P11Q13670 270 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms