RNA–Protein interactions for RNA: YOR033C

EXO1, Transcript of 5'-3' exonuclease and flap-endonuclease, yeast

Gene EXO1, Length 2,109 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EXO1	YOR033C	SPO24	Q3E752	67 aa		4.3	□□□□□ -1.72
EXO1	YOR033C	YBL059W	P34224	193 aa		4.3	□□□□□ -1.72
EXO1	YOR033C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.3	□□□□□ -1.72	not detected
EXO1	YOR033C	SMP1	P38128	452 aa		4.3	□□□□□ -1.72
EXO1	YOR033C	BXI1	P48558	297 aa		4.3	□□□□□ -1.72
EXO1	YOR033C	TPC1	P53257	314 aa		4.3	□□□□□ -1.72
EXO1	YOR033C	CPD1	P53314	239 aa		4.3	□□□□□ -1.72
EXO1	YOR033C	NDD1	Q08887	554 aa		4.3	□□□□□ -1.72
EXO1	YOR033C	SVP26	P38869	228 aa		4.29	□□□□□ -1.72
EXO1	YOR033C	YFR054C	P43622	192 aa		4.29	□□□□□ -1.72
EXO1	YOR033C	TDA4	P47153	279 aa		4.29	□□□□□ -1.72
EXO1	YOR033C	SDS23	P53172	527 aa		4.29	□□□□□ -1.72
EXO1	YOR033C	HST4	P53688	370 aa		4.29	□□□□□ -1.72
EXO1	YOR033C	TDA7	P53882	636 aa	Predicted RBP	4.29	□□□□□ -1.72
EXO1	YOR033C	PIR3	Q03180	325 aa		4.29	□□□□□ -1.72
EXO1	YOR033C	YHM2	Q04013	314 aa		4.29	□□□□□ -1.72
EXO1	YOR033C	YOR387C	Q08910	206 aa		4.29	□□□□□ -1.72
EXO1	YOR033C	YLR149C	Q99296	730 aa		4.29	□□□□□ -1.72
EXO1	YOR033C	AHT1	P29589	182 aa		4.28	□□□□□ -1.72
EXO1	YOR033C	MTC7	P32633	139 aa		4.28	□□□□□ -1.72
EXO1	YOR033C	AUR1	P36107	401 aa	Predicted RBP	4.28	□□□□□ -1.72
EXO1	YOR033C	YHR140W	P38842	239 aa		4.28	□□□□□ -1.72
EXO1	YOR033C	YER181C	P40097	107 aa		4.28	□□□□□ -1.72
EXO1	YOR033C	GPI2	P46961	280 aa		4.28	□□□□□ -1.72
EXO1	YOR033C	ROT1	Q03691	256 aa		4.28	□□□□□ -1.72
EXO1	YOR033C	YNL200C	P40165	246 aa	Known RBP	4.28	□□□□□ -1.72
EXO1	YOR033C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
EXO1	YOR033C	YDR209C	Q03480	137 aa		4.28	□□□□□ -1.72
EXO1	YOR033C	COA2	Q3E823	68 aa		4.28	□□□□□ -1.72
EXO1	YOR033C	IGO2	Q9P305	131 aa		4.28	□□□□□ -1.72
EXO1	YOR033C	YCR006C	P25350	157 aa		4.27	□□□□□ -1.73
EXO1	YOR033C	YCR025C	P25352	136 aa		4.27	□□□□□ -1.73
EXO1	YOR033C	OM14	P38325	134 aa		4.27	□□□□□ -1.73
EXO1	YOR033C	VHS2	P40463	436 aa		4.27	□□□□□ -1.73
EXO1	YOR033C	EAF6	P47128	113 aa		4.27	□□□□□ -1.73
EXO1	YOR033C	COX12	Q01519	83 aa		4.27	□□□□□ -1.73
EXO1	YOR033C	MIX17	Q03667	156 aa		4.27	□□□□□ -1.73
EXO1	YOR033C	MCH4	Q08268	501 aa		4.27	□□□□□ -1.73
EXO1	YOR033C	YPL038W-A	Q3E7B4	63 aa		4.27	□□□□□ -1.73
EXO1	YOR033C	RPS22A	P0C0W1	130 aa	Known RBP	4.27	□□□□□ -1.73
EXO1	YOR033C	FUN19	P28003	413 aa	Predicted RBP	4.27	□□□□□ -1.73
EXO1	YOR033C	REC114	P32841	428 aa		4.27	□□□□□ -1.73
EXO1	YOR033C	YBL081W	P38180	368 aa	Known RBP	4.27	□□□□□ -1.73
EXO1	YOR033C	YIL014C-A	Q02598	104 aa		4.27	□□□□□ -1.73
EXO1	YOR033C	MIM1	Q08176	113 aa		4.27	□□□□□ -1.73
EXO1	YOR033C	YPR064W	Q12492	139 aa		4.27	□□□□□ -1.73
EXO1	YOR033C	YHR139C-A	O13536	103 aa		4.26	□□□□□ -1.73
EXO1	YOR033C	AQY1	P0CD91	305 aa		4.26	□□□□□ -1.73
EXO1	YOR033C	BET1	P22804	142 aa		4.26	□□□□□ -1.73
EXO1	YOR033C	RRT13	P40042	185 aa		4.26	□□□□□ -1.73
EXO1	YOR033C	SKI6	P46948	246 aa	Predicted RBP	4.26	□□□□□ -1.73
EXO1	YOR033C	VPS55	P47111	140 aa		4.26	□□□□□ -1.73
EXO1	YOR033C	YLR302C	O13544	120 aa		4.25	□□□□□ -1.73
EXO1	YOR033C	RPL30	P14120	105 aa	Known RBP	4.25	□□□□□ -1.73
EXO1	YOR033C	FZF1	P32805	299 aa		4.25	□□□□□ -1.73
EXO1	YOR033C	BUD8	P41698	603 aa		4.25	□□□□□ -1.73
EXO1	YOR033C	YMR317W	Q04893	1140 aa		4.25	□□□□□ -1.73
EXO1	YOR033C	CSR2	Q12734	1121 aa		4.25	□□□□□ -1.73
EXO1	YOR033C	OST1	P41543	476 aa	Known RBP	4.25	□□□□□ -1.73
EXO1	YOR033C	FIP1	P45976	327 aa		4.25	□□□□□ -1.73
EXO1	YOR033C	CIS3	P47001	227 aa		4.25	□□□□□ -1.73
EXO1	YOR033C	CRH1	P53301	507 aa		4.25	□□□□□ -1.73
EXO1	YOR033C	ATP23	P53722	227 aa		4.25	□□□□□ -1.73
EXO1	YOR033C	DIF1	O13577	133 aa		4.24	□□□□□ -1.73
EXO1	YOR033C	UBC4	P15731	148 aa		4.24	□□□□□ -1.73
EXO1	YOR033C	YKL044W	P36092	106 aa		4.24	□□□□□ -1.73
EXO1	YOR033C	MED6	P38782	295 aa		4.24	□□□□□ -1.73
EXO1	YOR033C	EMC6	Q12431	108 aa		4.24	□□□□□ -1.73
EXO1	YOR033C	YMR175W-A	Q3E766	64 aa		4.24	□□□□□ -1.73
EXO1	YOR033C	YMR316C-A	I2HB70	103 aa		4.24	□□□□□ -1.73
EXO1	YOR033C	BRP1	P53194	125 aa		4.24	□□□□□ -1.73
EXO1	YOR033C	SHH4	Q06236	168 aa		4.24	□□□□□ -1.73
EXO1	YOR033C	TIM18	Q08749	192 aa		4.24	□□□□□ -1.73
EXO1	YOR033C	COX17	Q12287	69 aa		4.24	□□□□□ -1.73
EXO1	YOR033C	RPS21B	Q3E754	87 aa	Known RBP	4.24	□□□□□ -1.73
EXO1	YOR033C	FLO1	P32768	1537 aa		4.23	□□□□□ -1.73
EXO1	YOR033C	RPP1	P38786	293 aa		4.23	□□□□□ -1.73
EXO1	YOR033C	YIL163C	P40448	117 aa		4.23	□□□□□ -1.73
EXO1	YOR033C	IES4	Q08561	116 aa		4.23	□□□□□ -1.73
EXO1	YOR033C	YPR096C	O13587	100 aa		4.22	□□□□□ -1.73
EXO1	YOR033C	RPL20A	P0CX23	172 aa	Known RBP	4.22	□□□□□ -1.73
EXO1	YOR033C	RPL20B	P0CX24	172 aa	Predicted RBP	4.22	□□□□□ -1.73
EXO1	YOR033C	GGC1	P38988	300 aa		4.22	□□□□□ -1.73
EXO1	YOR033C	JJJ3	P47138	172 aa		4.22	□□□□□ -1.73
EXO1	YOR033C	RRT15	Q3E811	62 aa		4.22	□□□□□ -1.73
EXO1	YOR033C	CCH1	P50077	2039 aa		4.22	□□□□□ -1.73
EXO1	YOR033C	DSE2	P38844	325 aa		4.22	□□□□□ -1.73
EXO1	YOR033C	IST3	P40565	148 aa	Predicted RBP	4.22	□□□□□ -1.73
EXO1	YOR033C	YNL234W	P53857	426 aa		4.22	□□□□□ -1.73
EXO1	YOR033C	RPC11	Q04307	110 aa	Predicted RBP	4.22	□□□□□ -1.73
EXO1	YOR033C	YOR186W	Q08560	144 aa		4.22	□□□□□ -1.73
EXO1	YOR033C	RRS1	Q08746	203 aa	Known RBP	4.22	□□□□□ -1.73
EXO1	YOR033C	NIP7	Q08962	181 aa	Known RBP	4.22	□□□□□ -1.73
EXO1	YOR033C	YDR381C-A	Q3E6R5	114 aa		4.22	□□□□□ -1.73
EXO1	YOR033C	CYR1	P08678	2026 aa	Known RBP	4.22	□□□□□ -1.73
EXO1	YOR033C	MRPL31	P14063	131 aa	Predicted RBP	4.21	□□□□□ -1.74
EXO1	YOR033C	FPR2	P32472	135 aa		4.21	□□□□□ -1.74
EXO1	YOR033C	APS1	P35181	156 aa		4.21	□□□□□ -1.74
EXO1	YOR033C	SFT2	P38166	215 aa		4.21	□□□□□ -1.74
EXO1	YOR033C	GAT4	P40569	121 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms