RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C YNL184CP53876 108 aa0.53□□□□□ -2.32
RKR1YMR247C YMR082CQ04276 118 aa0.53□□□□□ -2.32
RKR1YMR247C YOL024WQ08172 172 aa0.53□□□□□ -2.32
RKR1YMR247C YPR203WQ08994 102 aa0.53□□□□□ -2.32
RKR1YMR247C UBR1P19812 1950 aa0.53□□□□□ -2.32
RKR1YMR247C NSE4P43124 402 aa0.53□□□□□ -2.33
RKR1YMR247C SOL1P50278 321 aa0.53□□□□□ -2.33
RKR1YMR247C SBH1P52870 82 aa0.53□□□□□ -2.33
RKR1YMR247C HRD1Q08109 551 aa0.53□□□□□ -2.33
RKR1YMR247C EFG1Q3E705 233 aaKnown RBP0.53□□□□□ -2.33
RKR1YMR247C YOR381W-AQ3E804 55 aa0.53□□□□□ -2.33
RKR1YMR247C RAD6P06104 172 aa0.52□□□□□ -2.33
RKR1YMR247C MRS1P07266 363 aa0.52□□□□□ -2.33
RKR1YMR247C YER188C-AP0C0V2 99 aa0.52□□□□□ -2.33
RKR1YMR247C ADE1P27616 306 aa0.52□□□□□ -2.33
RKR1YMR247C YKR070WP36151 352 aaKnown RBP0.52□□□□□ -2.33
RKR1YMR247C MPC1P53157 130 aaKnown RBP0.52□□□□□ -2.33
RKR1YMR247C YKR005CQ02203 525 aa0.52□□□□□ -2.33
RKR1YMR247C SMD2Q06217 110 aaKnown RBP0.52□□□□□ -2.33
RKR1YMR247C YHR213W-AQ8TGT4 77 aa0.52□□□□□ -2.33
RKR1YMR247C UBC5P15732 148 aa0.52□□□□□ -2.33
RKR1YMR247C ATP15P21306 62 aa0.52□□□□□ -2.33
RKR1YMR247C HYP2P23301 157 aaKnown RBP0.52□□□□□ -2.33
RKR1YMR247C UTP30P36144 274 aaKnown RBP0.52□□□□□ -2.33
RKR1YMR247C YEL067CP39978 195 aa0.52□□□□□ -2.33
RKR1YMR247C YER137CP40083 148 aaKnown RBP0.52□□□□□ -2.33
RKR1YMR247C TTI2P47168 421 aa0.52□□□□□ -2.33
RKR1YMR247C YGR017WP53210 297 aa0.52□□□□□ -2.33
RKR1YMR247C CDC14Q00684 551 aa0.52□□□□□ -2.33
RKR1YMR247C SHH4Q06236 168 aa0.52□□□□□ -2.33
RKR1YMR247C LDB18Q07887 179 aa0.52□□□□□ -2.33
RKR1YMR247C YPR013CQ12145 317 aa0.52□□□□□ -2.33
RKR1YMR247C YHR213W-BQ8TGK1 99 aa0.52□□□□□ -2.33
RKR1YMR247C KIN28P06242 306 aa0.52□□□□□ -2.33
RKR1YMR247C NMT1P14743 455 aa0.52□□□□□ -2.33
RKR1YMR247C TIM11P81449 96 aaPredicted RBP0.52□□□□□ -2.33
RKR1YMR247C GAL83Q04739 417 aa0.52□□□□□ -2.33
RKR1YMR247C CSI2Q08054 341 aa0.52□□□□□ -2.33
RKR1YMR247C RIB3Q99258 208 aa0.52□□□□□ -2.33
RKR1YMR247C LAA1P39526 2014 aa0.52□□□□□ -2.33
RKR1YMR247C RFA3P26755 122 aaKnown RBP0.52□□□□□ -2.33
RKR1YMR247C YHR140WP38842 239 aa0.52□□□□□ -2.33
RKR1YMR247C NVJ1P38881 321 aa0.52□□□□□ -2.33
RKR1YMR247C YGR269WP40326 108 aa0.52□□□□□ -2.33
RKR1YMR247C POG1P40473 351 aa0.52□□□□□ -2.33
RKR1YMR247C YMR321CQ04898 105 aa0.52□□□□□ -2.33
RKR1YMR247C RRT7Q07829 113 aa0.52□□□□□ -2.33
RKR1YMR247C COA3Q3E7B2 85 aa0.52□□□□□ -2.33
RKR1YMR247C PRP8P33334 2413 aaKnown RBP0.51□□□□□ -2.33
RKR1YMR247C POR1P04840 283 aaKnown RBP0.51□□□□□ -2.33
RKR1YMR247C QCR8P08525 94 aa0.51□□□□□ -2.33
RKR1YMR247C YCR101CP25607 182 aa0.51□□□□□ -2.33
RKR1YMR247C SRY1P36007 326 aa0.51□□□□□ -2.33
RKR1YMR247C YBR013CP38215 129 aa0.51□□□□□ -2.33
RKR1YMR247C GTT1P40582 234 aa0.51□□□□□ -2.33
RKR1YMR247C YMR252CQ04814 134 aa0.51□□□□□ -2.33
RKR1YMR247C NSL1Q12143 216 aa0.51□□□□□ -2.33
RKR1YMR247C YLR046CQ12253 270 aa0.51□□□□□ -2.33
RKR1YMR247C SHB17P36136 271 aaKnown RBP0.51□□□□□ -2.33
RKR1YMR247C YBR090CP38253 122 aa0.51□□□□□ -2.33
RKR1YMR247C GAT4P40569 121 aa0.51□□□□□ -2.33
RKR1YMR247C YJL009WP47078 108 aa0.51□□□□□ -2.33
RKR1YMR247C LSM8P47093 109 aaKnown RBP0.51□□□□□ -2.33
RKR1YMR247C NMA1Q06178 401 aaKnown RBP0.51□□□□□ -2.33
RKR1YMR247C TIR1P10863 254 aa0.51□□□□□ -2.33
RKR1YMR247C YNL200CP40165 246 aaKnown RBP0.51□□□□□ -2.33
RKR1YMR247C SPG1P50088 95 aa0.51□□□□□ -2.33
RKR1YMR247C CWC23P52868 283 aaPredicted RBP0.51□□□□□ -2.33
RKR1YMR247C PKR1Q03880 122 aaKnown RBP0.51□□□□□ -2.33
RKR1YMR247C SYM1Q06563 197 aa0.51□□□□□ -2.33
RKR1YMR247C OCA6Q12454 224 aa0.51□□□□□ -2.33
RKR1YMR247C TAH1P25638 111 aaPredicted RBP0.5□□□□□ -2.33
RKR1YMR247C DER1P38307 211 aa0.5□□□□□ -2.33
RKR1YMR247C SWM2P40342 146 aa0.5□□□□□ -2.33
RKR1YMR247C YLR460CP54007 376 aa0.5□□□□□ -2.33
RKR1YMR247C ARL3Q02804 198 aa0.5□□□□□ -2.33
RKR1YMR247C IRC23Q08416 157 aa0.5□□□□□ -2.33
RKR1YMR247C VAM10Q08474 114 aa0.5□□□□□ -2.33
RKR1YMR247C NAT5Q08689 176 aa0.5□□□□□ -2.33
RKR1YMR247C SCS22Q6Q595 175 aa0.5□□□□□ -2.33
RKR1YMR247C YFR032C-BQ8TGU2 87 aa0.5□□□□□ -2.33
RKR1YMR247C INO4P13902 151 aa0.5□□□□□ -2.33
RKR1YMR247C AIM18P38884 321 aa0.5□□□□□ -2.33
RKR1YMR247C APQ12P40532 138 aa0.5□□□□□ -2.33
RKR1YMR247C MVB12P42939 101 aa0.5□□□□□ -2.33
RKR1YMR247C YIP3P53633 176 aa0.5□□□□□ -2.33
RKR1YMR247C YNL033WP53964 284 aa0.5□□□□□ -2.33
RKR1YMR247C FMN1Q03778 218 aa0.5□□□□□ -2.33
RKR1YMR247C NOC4Q06512 552 aaPredicted RBP0.5□□□□□ -2.33
RKR1YMR247C CCW12Q12127 133 aa0.5□□□□□ -2.33
RKR1YMR247C ATP20Q12233 115 aa0.5□□□□□ -2.33
RKR1YMR247C YHR086W-AQ3E746 53 aa0.5□□□□□ -2.33
RKR1YMR247C YPL229WQ99395 206 aa0.5□□□□□ -2.33
RKR1YMR247C YJL197C-AP0C5P0 93 aa0.5□□□□□ -2.33
RKR1YMR247C MRPL44P19956 98 aa0.5□□□□□ -2.33
RKR1YMR247C SEC59P20048 519 aa0.5□□□□□ -2.33
RKR1YMR247C RPS1BP23248 255 aaKnown RBP0.5□□□□□ -2.33
RKR1YMR247C ATG8P38182 117 aaRIP-Chip data0.5□□□□□ -2.33not detected
RKR1YMR247C YAR064WP39563 99 aa0.5□□□□□ -2.33
RKR1YMR247C GPI2P46961 280 aa0.5□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms