RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C YKL070WP36087 169 aa3.61□□□□□ -1.83
NMD4YLR363C SWD2P36104 329 aaPredicted RBP3.61□□□□□ -1.83
NMD4YLR363C LSM2P38203 95 aaKnown RBP3.61□□□□□ -1.83
NMD4YLR363C PEX22P39718 180 aa3.61□□□□□ -1.83
NMD4YLR363C PIR5P46999 287 aa3.61□□□□□ -1.83
NMD4YLR363C RPL21AQ02753 160 aaKnown RBP3.61□□□□□ -1.83
NMD4YLR363C YDR114CQ04597 100 aa3.61□□□□□ -1.83
NMD4YLR363C UPS1Q05776 175 aa3.61□□□□□ -1.83
NMD4YLR363C RPL21BQ12672 160 aaKnown RBP3.61□□□□□ -1.83
NMD4YLR363C RPS25AQ3E792 108 aaPredicted RBP3.61□□□□□ -1.83
NMD4YLR363C SIR2P06700 562 aa3.6□□□□□ -1.83
NMD4YLR363C TRS20P38334 175 aa3.6□□□□□ -1.83
NMD4YLR363C RPL14BP38754 138 aaKnown RBP3.6□□□□□ -1.83
NMD4YLR363C YHR130CP38834 111 aa3.6□□□□□ -1.83
NMD4YLR363C IRC22P40006 225 aa3.6□□□□□ -1.83
NMD4YLR363C ERG28P40030 148 aa3.6□□□□□ -1.83
NMD4YLR363C EMC5P40540 141 aa3.6□□□□□ -1.83
NMD4YLR363C SMD3P43321 101 aaKnown RBP3.6□□□□□ -1.83
NMD4YLR363C AIM25P47140 327 aa3.6□□□□□ -1.83
NMD4YLR363C PAM18Q07914 168 aa3.6□□□□□ -1.83
NMD4YLR363C YEL009C-AA0A023PZF2 135 aa3.59□□□□□ -1.83
NMD4YLR363C INO2P26798 304 aa3.59□□□□□ -1.83
NMD4YLR363C IMP1P28627 190 aa3.59□□□□□ -1.83
NMD4YLR363C TRR1P29509 319 aaKnown RBP3.59□□□□□ -1.83
NMD4YLR363C ADH5P38113 351 aaKnown RBP3.59□□□□□ -1.83
NMD4YLR363C PAU24P38155 120 aa3.59□□□□□ -1.83
NMD4YLR363C RPA43P46669 326 aa3.59□□□□□ -1.83
NMD4YLR363C CAB5Q03941 241 aa3.59□□□□□ -1.83
NMD4YLR363C THI74Q04083 370 aa3.59□□□□□ -1.83
NMD4YLR363C NOC4Q06512 552 aaPredicted RBP3.59□□□□□ -1.83
NMD4YLR363C YOR186WQ08560 144 aa3.59□□□□□ -1.83
NMD4YLR363C YOR029WQ12243 111 aa3.59□□□□□ -1.83
NMD4YLR363C ADK1P07170 222 aaKnown RBP3.58□□□□□ -1.84
NMD4YLR363C PHO85P17157 305 aa3.58□□□□□ -1.84
NMD4YLR363C COX10P21592 462 aa3.58□□□□□ -1.84
NMD4YLR363C RAD23P32628 398 aaKnown RBP3.58□□□□□ -1.84
NMD4YLR363C ZRT1P32804 376 aa3.58□□□□□ -1.84
NMD4YLR363C YBR090CP38253 122 aa3.58□□□□□ -1.84
NMD4YLR363C SPC25P40014 221 aa3.58□□□□□ -1.84
NMD4YLR363C NSA2P40078 261 aaKnown RBP3.58□□□□□ -1.84
NMD4YLR363C MSL1P40567 111 aaPredicted RBP3.58□□□□□ -1.84
NMD4YLR363C TTI2P47168 421 aa3.58□□□□□ -1.84
NMD4YLR363C DAD3P69850 94 aa3.58□□□□□ -1.84
NMD4YLR363C YMR166CQ03829 368 aa3.58□□□□□ -1.84
NMD4YLR363C YPL264CQ08980 353 aa3.58□□□□□ -1.84
NMD4YLR363C TIR4Q12218 487 aaPredicted RBP3.58□□□□□ -1.84
NMD4YLR363C MPD1Q12404 318 aaKnown RBP3.58□□□□□ -1.84
NMD4YLR363C RDI1Q12434 202 aa3.58□□□□□ -1.84
NMD4YLR363C ATG40Q99325 256 aa3.58□□□□□ -1.84
NMD4YLR363C VPS63O13549 108 aa3.57□□□□□ -1.84
NMD4YLR363C TOM40P23644 387 aaKnown RBP3.57□□□□□ -1.84
NMD4YLR363C RFA3P26755 122 aaKnown RBP3.57□□□□□ -1.84
NMD4YLR363C RPL16AP26784 199 aaKnown RBP3.57□□□□□ -1.84
NMD4YLR363C MIG1P27705 504 aa3.57□□□□□ -1.84
NMD4YLR363C PAU2P32612 120 aa3.57□□□□□ -1.84
NMD4YLR363C PAN3P36102 679 aaPredicted RBP3.57□□□□□ -1.84
NMD4YLR363C ECM33P38248 429 aaKnown RBP3.57□□□□□ -1.84
NMD4YLR363C YER076CP40049 302 aa3.57□□□□□ -1.84
NMD4YLR363C CCS1P40202 249 aaKnown RBP3.57□□□□□ -1.84
NMD4YLR363C CAT5P41735 233 aa3.57□□□□□ -1.84
NMD4YLR363C PAU5P43575 122 aa3.57□□□□□ -1.84
NMD4YLR363C ABF2Q02486 183 aa3.57□□□□□ -1.84
NMD4YLR363C YDR115WQ04598 105 aa3.57□□□□□ -1.84
NMD4YLR363C FSH2Q05015 223 aa3.57□□□□□ -1.84
NMD4YLR363C PRM3Q08931 133 aa3.57□□□□□ -1.84
NMD4YLR363C YDL157CQ12082 118 aa3.57□□□□□ -1.84
NMD4YLR363C RFM1Q12192 310 aa3.57□□□□□ -1.84
NMD4YLR363C COX19Q3E731 98 aa3.57□□□□□ -1.84
NMD4YLR363C RAD6P06104 172 aa3.56□□□□□ -1.84
NMD4YLR363C UMP1P38293 148 aa3.56□□□□□ -1.84
NMD4YLR363C HTD2P38790 280 aaKnown RBP3.56□□□□□ -1.84
NMD4YLR363C YMR252CQ04814 134 aa3.56□□□□□ -1.84
NMD4YLR363C ATG41Q12048 136 aa3.56□□□□□ -1.84
NMD4YLR363C HYP2P23301 157 aaKnown RBP3.55□□□□□ -1.84
NMD4YLR363C PAU16P35994 123 aa3.55□□□□□ -1.84
NMD4YLR363C PHS1P40857 217 aa3.55□□□□□ -1.84
NMD4YLR363C CDC40P40968 455 aaPredicted RBP3.55□□□□□ -1.84
NMD4YLR363C PDR17P53844 350 aa3.55□□□□□ -1.84
NMD4YLR363C HSK3P69852 69 aa3.55□□□□□ -1.84
NMD4YLR363C HNT1Q04344 158 aaKnown RBP3.55□□□□□ -1.84
NMD4YLR363C SPG4Q04438 115 aa3.55□□□□□ -1.84
NMD4YLR363C YER039C-AP0CD97 72 aa3.54□□□□□ -1.84
NMD4YLR363C INO4P13902 151 aa3.54□□□□□ -1.84
NMD4YLR363C MIC12P38341 106 aa3.54□□□□□ -1.84
NMD4YLR363C ERG25P53045 309 aa3.54□□□□□ -1.84
NMD4YLR363C EST3Q03096 181 aa3.54□□□□□ -1.84
NMD4YLR363C MIX17Q03667 156 aa3.54□□□□□ -1.84
NMD4YLR363C RAV2Q03956 351 aa3.54□□□□□ -1.84
NMD4YLR363C KEI1Q06346 221 aa3.54□□□□□ -1.84
NMD4YLR363C TFB5Q3E7C1 72 aaPredicted RBP3.54□□□□□ -1.84
NMD4YLR363C UBC5P15732 148 aa3.53□□□□□ -1.84
NMD4YLR363C ERG2P32352 222 aa3.53□□□□□ -1.84
NMD4YLR363C ERG24P32462 438 aaKnown RBP3.53□□□□□ -1.84
NMD4YLR363C FYV4P38783 130 aaPredicted RBP3.53□□□□□ -1.84
NMD4YLR363C HSP10P38910 106 aa3.53□□□□□ -1.84
NMD4YLR363C YNL198CP40166 100 aa3.53□□□□□ -1.84
NMD4YLR363C YNL194CP40169 301 aa3.53□□□□□ -1.84
NMD4YLR363C YFL065CP43539 102 aa3.53□□□□□ -1.84
NMD4YLR363C YJL118WP47022 219 aa3.53□□□□□ -1.84
NMD4YLR363C AIM11P87275 137 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms