RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 CRADDP78560 199 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 SP2Q02086 613 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 GAD2Q05329 585 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 TREML2Q5T2D2 321 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 NXNQ6DKJ4 435 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 CES3Q6UWW8 571 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 SCUBE3Q8IX30 993 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 ZDHHC14Q8IZN3 488 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 ABRAQ8N0Z2 381 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 PDCD7Q8N8D1 485 aaKnown RBP11.71□□□□□ -0.53
DDR1-240ENST00000454612 FAM111AQ96PZ2 611 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 RPS6KC1Q96S38 1066 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 XPNPEP1Q9NQW7 623 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 ACSS2Q9NR19 701 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 MYH11P35749 1972 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 LRRC37AA6NMS7 1700 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 DHX15O43143 795 aaKnown RBP11.71□□□□□ -0.53
DDR1-240ENST00000454612 DENND1BQ6P3S1 775 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 CROCCP2Q86T23 111 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 APOL2Q9BQE5 337 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 KIAA1683Q9H0B3 1180 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 A8MXQ7 604 aa11.71□□□□□ -0.54
DDR1-240ENST00000454612 TMED1Q13445 227 aa11.71□□□□□ -0.54
DDR1-240ENST00000454612 FBXO36Q8NEA4 188 aa11.71□□□□□ -0.54
DDR1-240ENST00000454612 JOSD2Q8TAC2 188 aa11.71□□□□□ -0.54
DDR1-240ENST00000454612 STAMBPL1Q96FJ0 436 aa11.71□□□□□ -0.54
DDR1-240ENST00000454612 LPIN3Q9BQK8 851 aa11.71□□□□□ -0.54
DDR1-240ENST00000454612 HERPUD2Q9BSE4 406 aa11.71□□□□□ -0.54
DDR1-240ENST00000454612 SIK2Q9H0K1 926 aa11.71□□□□□ -0.54
DDR1-240ENST00000454612 APOBEC3GQ9HC16 384 aaKnown RBP11.71□□□□□ -0.54
DDR1-240ENST00000454612 ZNF541Q9H0D2 1346 aa11.71□□□□□ -0.54
DDR1-240ENST00000454612 LPXNO60711 386 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 CD48P09326 243 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 RFX1P22670 979 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 EPHB1P54762 984 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 MAMLD1Q13495 774 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 ANKRD20A8PQ5CZ79 823 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 MFSD4BQ5TF39 518 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 VPS11Q9H270 941 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 DMAC2Q9NW81 257 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 CYP39A1Q9NYL5 469 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 MCM8Q9UJA3 840 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 FAM47DPA6NHR8 397 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 FSBPO95073 299 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 CALB1P05937 261 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 NCF2P19878 526 aaPredicted RBP11.7□□□□□ -0.54
DDR1-240ENST00000454612 RABGGTBP53611 331 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 LMNB2Q03252 620 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 LAMTOR4Q0VGL1 99 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 ZNF572Q7Z3I7 529 aaPredicted RBP11.7□□□□□ -0.54
DDR1-240ENST00000454612 TMEM192Q8IY95 271 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 BBOF1Q8ND07 529 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 TMEM165Q9HC07 324 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 ZNF536O15090 1300 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 ADAMTSL1Q8N6G6 1762 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 LOC100653049A0A140TA62 436 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 DYNC1LI2O43237 492 aaPredicted RBP11.7□□□□□ -0.54
DDR1-240ENST00000454612 ATP9BO43861 1147 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 KRT34O76011 436 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 CTSHP09668 335 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 MAPTP10636 758 aaKnown RBP11.7□□□□□ -0.54
DDR1-240ENST00000454612 GNAT1P11488 350 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 YBX3P16989 372 aaKnown RBP eCLIP11.7□□□□□ -0.544e-7■□□□□ 9.7
DDR1-240ENST00000454612 UBA1P22314 1058 aaKnown RBP11.7□□□□□ -0.54
DDR1-240ENST00000454612 RPS12P25398 132 aaKnown RBP11.7□□□□□ -0.54
DDR1-240ENST00000454612 AP1B1Q10567 949 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 TMEM63BQ5T3F8 832 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 ZDHHC24Q6UX98 284 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 USP33Q8TEY7 942 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 TTC1Q99614 292 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 NIF3L1Q9GZT8 377 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 NOD2Q9HC29 1040 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 KIAA1586Q9HCI6 787 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 BATF3Q9NR55 127 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 CHCHD3Q9NX63 227 aaKnown RBP11.7□□□□□ -0.54
DDR1-240ENST00000454612 ZFP69BQ9UJL9 534 aa11.7□□□□□ -0.54
DDR1-240ENST00000454612 TIMM13Q9Y5L4 95 aaPredicted RBP11.7□□□□□ -0.54
DDR1-240ENST00000454612 COPEO14579 308 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 IRF6O14896 467 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 PPFIA2O75334 1257 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 LGR5O75473 907 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 TBXAS1P24557 533 aaPredicted RBP11.69□□□□□ -0.54
DDR1-240ENST00000454612 AKAP5P24588 427 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 DPY19L2P1Q6NXN4 242 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 B4GALNT2Q8NHY0 566 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 ADAM32Q8TC27 787 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 CRYGNQ8WXF5 182 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 FAM81BQ96LP2 452 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 FIZ1Q96SL8 496 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 MMP19Q99542 508 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 PCMTD2Q9NV79 361 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 ARMCX1Q9P291 453 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 ESRRAP11474 423 aaPredicted RBP11.69□□□□□ -0.54
DDR1-240ENST00000454612 P4HA1P13674 534 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 DRD4P21917 467 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 ADRA1DP25100 572 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 SDC4P31431 198 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 CUL3Q13618 768 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 CAPSQ13938 189 aa11.69□□□□□ -0.54
DDR1-240ENST00000454612 SH3PXD2AQ5TCZ1 1133 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms