RNA–Protein interactions for RNA: ENSMUST00000027068.10

Tram1-201, Transcript of Translocating chain-associated membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tram1, Length 2,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1-201ENSMUST00000027068 Gja8P28236 440 aa20.22■□□□□ 0.83
Tram1-201ENSMUST00000027068 Ptk2P34152 1090 aa20.22■□□□□ 0.83
Tram1-201ENSMUST00000027068 PhbP67778 272 aaKnown RBP20.22■□□□□ 0.83
Tram1-201ENSMUST00000027068 9130409I23RikQ3TS87 320 aa20.22■□□□□ 0.83
Tram1-201ENSMUST00000027068 Nuak1Q641K5 658 aa20.22■□□□□ 0.83
Tram1-201ENSMUST00000027068 Rps6kc1Q8BLK9 1056 aa20.22■□□□□ 0.83
Tram1-201ENSMUST00000027068 Tcaf1Q8BNE1 924 aa20.22■□□□□ 0.83
Tram1-201ENSMUST00000027068 BrdtQ91Y44 956 aa20.22■□□□□ 0.83
Tram1-201ENSMUST00000027068 Polr3cQ9D483 533 aa20.22■□□□□ 0.83
Tram1-201ENSMUST00000027068 PrkceP16054 737 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Elk3P41971 409 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 YwhagP61982 247 aaKnown RBP20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Sema5bQ60519 1093 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Tcf12Q61286 706 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Hmgb4Q6P8W9 181 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Tasp1Q8R1G1 420 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Rdh14Q9ERI6 334 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Nr1h3Q9Z0Y9 445 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Robo3Q9Z2I4 1366 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Siah3B2RWG3 268 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Zfp715G3X9T1 886 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Kbtbd2G3X9X1 623 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Cdh16O88338 830 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Il3P01586 166 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 KitP05532 979 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Usp10P52479 792 aaKnown RBP20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Stx2Q00262 289 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Tmem63bQ3TWI9 832 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Sh3tc2Q80VA5 1289 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Taf2Q8C176 1104 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Znf426Q8R1D1 550 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Lrp8Q924X6 996 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Cttnbp2nlQ99LJ0 638 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Sun1Q9D666 913 aaKnown RBP20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 ParvaQ9EPC1 372 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Jph2Q9ET78 696 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Gon4lQ9DB00 2260 aa20.21■□□□□ 0.83
Tram1-201ENSMUST00000027068 Aoc3O70423 765 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Slc10a3P21129 473 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Stmn2P55821 179 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Cntn3Q07409 1028 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Kmt5aQ2YDW7 349 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Kctd8Q50H33 476 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 XiapQ60989 496 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 HpseQ6YGZ1 535 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Olfr1505Q7TQQ2 316 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Wdtc1Q80ZK9 677 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Cul2Q9D4H8 745 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Slc8a3S4R2P9 928 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Speer3W4VSP1 261 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Mical3Q8CJ19 1993 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Klhl41A2AUC9 606 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Fam155bA2BDP1 471 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Clca3bE9PUL3 1044 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Ptpn20O55082 426 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Casp7P97864 303 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 GabpaQ00422 454 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Nsun2Q1HFZ0 757 aaKnown RBP20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Glt6d1Q2NKH9 311 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Pi4k2aQ2TBE6 479 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Spdye4aQ5IBH6 268 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Srd5a1Q68FF9 255 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Klhl23Q6GQU2 558 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Acap2Q6ZQK5 770 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Fam151aQ8QZW3 608 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Q8R1Y2 203 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Spats2lQ91WJ7 558 aaKnown RBP20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Npm3Q9CPP0 175 aaKnown RBP20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Rmi1Q9D4G9 616 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Vmn2r104E9Q2J5 860 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Per1O35973 1291 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Nos2P29477 1144 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Lonp1Q8CGK3 949 aaKnown RBP20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Olfr449Q8VGW8 311 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Nme5Q99MH5 211 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Hes6Q9JHE6 224 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Ccr10Q9JL21 362 aa20.2■□□□□ 0.82
Tram1-201ENSMUST00000027068 Raph1F2Z3U3 1266 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 Gm379J3QQ19 296 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 DldO08749 509 aaKnown RBP20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 Nr3c1P06537 783 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 AlplP09242 524 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 Myl6Q60605 151 aaKnown RBP20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 Ptrh1Q8BW00 204 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 Slc7a14Q8BXR1 771 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 Nipal4Q8BZF2 406 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 Q8CD60 292 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 Pcdha3Q91Y16 942 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 Itgb4A2A863 1818 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 PdgfaP20033 211 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 Gnl1P36916 607 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 Cyth2P63034 400 aaKnown RBP20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 S100a5P63084 93 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 Eif2dQ61211 570 aaKnown RBP20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 Insm1Q63ZV0 521 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 Ptk6Q64434 451 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 Fam185aQ7TPD2 378 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 SowahcQ8C0J6 512 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 Tgif2lx2Q8K5B9 231 aa20.19■□□□□ 0.82
Tram1-201ENSMUST00000027068 Rhobtb2Q91V93 728 aa20.19■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms