Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Gm25239-201ENSMUST00000174915 86 ntBASIC39.2■■■■□ 3.87
Q8CD60 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
Q8CD60 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Q8CD60 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
Q8CD60 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Q8CD60 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.74■■■■□ 3.15
Q8CD60 Gm15042-201ENSMUST00000120212 883 ntBASIC34.64■■■■□ 3.14
Q8CD60 Gm15045-201ENSMUST00000117359 883 ntBASIC33.98■■■■□ 3.03
Q8CD60 Gm24109-201ENSMUST00000175489 103 ntBASIC33.81■■■■□ 3
Q8CD60 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Q8CD60 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Q8CD60 Psd-208ENSMUST00000224556 2034 ntBASIC33.38■■■□□ 2.93
Q8CD60 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
Q8CD60 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.04■■■□□ 2.88
Q8CD60 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
Q8CD60 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Q8CD60 Gm23366-201ENSMUST00000175022 89 ntBASIC32.75■■■□□ 2.83
Q8CD60 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Q8CD60 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Q8CD60 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
Q8CD60 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Q8CD60 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Q8CD60 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
Q8CD60 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
Q8CD60 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Q8CD60 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.18■■■□□ 2.74
Q8CD60 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Q8CD60 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Q8CD60 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Q8CD60 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Q8CD60 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
Q8CD60 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.82■■■□□ 2.68
Q8CD60 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Q8CD60 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.77■■■□□ 2.68
Q8CD60 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Q8CD60 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Q8CD60 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Q8CD60 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Q8CD60 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Q8CD60 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.29■■■□□ 2.6
Q8CD60 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Q8CD60 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.14■■■□□ 2.58
Q8CD60 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.97■■■□□ 2.55
Q8CD60 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Q8CD60 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Q8CD60 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Q8CD60 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.92■■■□□ 2.54
Q8CD60 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Q8CD60 Gm25238-201ENSMUST00000174914 89 ntBASIC30.83■■■□□ 2.53
Q8CD60 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Q8CD60 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Q8CD60 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.74■■■□□ 2.51
Q8CD60 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Q8CD60 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.68■■■□□ 2.5
Q8CD60 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Q8CD60 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Q8CD60 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Q8CD60 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Q8CD60 Gm27325-201ENSMUST00000175467 74 ntBASIC30.43■■■□□ 2.46
Q8CD60 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Q8CD60 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Q8CD60 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Q8CD60 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.31■■■□□ 2.44
Q8CD60 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.3■■■□□ 2.44
Q8CD60 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.3■■■□□ 2.44
Q8CD60 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Q8CD60 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.24■■■□□ 2.43
Q8CD60 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
Q8CD60 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.42
Q8CD60 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.18■■■□□ 2.42
Q8CD60 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Q8CD60 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Q8CD60 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.16■■■□□ 2.42
Q8CD60 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Q8CD60 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Q8CD60 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Q8CD60 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Q8CD60 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.88■■■□□ 2.37
Q8CD60 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Q8CD60 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.86■■■□□ 2.37
Q8CD60 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.8■■■□□ 2.36
Q8CD60 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Q8CD60 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.73■■■□□ 2.35
Q8CD60 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Q8CD60 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Q8CD60 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Q8CD60 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
Q8CD60 Rab21-202ENSMUST00000218831 843 ntBASIC29.58■■■□□ 2.33
Q8CD60 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Q8CD60 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
Q8CD60 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Q8CD60 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Q8CD60 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Q8CD60 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Q8CD60 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.44■■■□□ 2.3
Q8CD60 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.41■■■□□ 2.3
Q8CD60 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Q8CD60 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.35■■■□□ 2.29
Q8CD60 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
Q8CD60 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms