RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeast

Gene YOP1, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YOP1	YPR028W	MRS4	P23500	304 aa		0.5	□□□□□ -2.33
YOP1	YPR028W	PEX34	P25584	144 aa		0.5	□□□□□ -2.33
YOP1	YPR028W	BUB2	P26448	306 aa	Predicted RBP	0.5	□□□□□ -2.33
YOP1	YPR028W	HSP150	P32478	413 aa		0.5	□□□□□ -2.33
YOP1	YPR028W	SLM6	P38343	150 aa		0.5	□□□□□ -2.33
YOP1	YPR028W	FIP1	P45976	327 aa		0.5	□□□□□ -2.33
YOP1	YPR028W	RCF2	P53721	224 aa		0.5	□□□□□ -2.33
YOP1	YPR028W	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.5	□□□□□ -2.33
YOP1	YPR028W	SRP21	P32342	167 aa		0.49	□□□□□ -2.33
YOP1	YPR028W	YER181C	P40097	107 aa		0.49	□□□□□ -2.33
YOP1	YPR028W	YNL122C	P53921	115 aa	Predicted RBP	0.49	□□□□□ -2.33
YOP1	YPR028W	ATP19	P81451	68 aa		0.49	□□□□□ -2.33
YOP1	YPR028W	RRT7	Q07829	113 aa		0.49	□□□□□ -2.33
YOP1	YPR028W	IRC19	Q07843	230 aa		0.49	□□□□□ -2.33
YOP1	YPR028W	RFU1	Q08003	200 aa		0.49	□□□□□ -2.33
YOP1	YPR028W	YOR072W	Q08486	104 aa		0.49	□□□□□ -2.33
YOP1	YPR028W	YPR202W	Q08993	238 aa		0.49	□□□□□ -2.33
YOP1	YPR028W	NSL1	Q12143	216 aa		0.49	□□□□□ -2.33
YOP1	YPR028W	EFG1	Q3E705	233 aa	Known RBP	0.49	□□□□□ -2.33
YOP1	YPR028W	YHR213W-B	Q8TGK1	99 aa		0.49	□□□□□ -2.33
YOP1	YPR028W	ATG8	P38182	117 aa	RIP-Chip data	0.48	□□□□□ -2.33	not detected
YOP1	YPR028W	DER1	P38307	211 aa		0.48	□□□□□ -2.33
YOP1	YPR028W	IPT1	P38954	527 aa		0.48	□□□□□ -2.33
YOP1	YPR028W	HHY1	P39982	102 aa		0.48	□□□□□ -2.33
YOP1	YPR028W	HAP2	P06774	265 aa		0.47	□□□□□ -2.33
YOP1	YPR028W	PHO13	P19881	312 aa		0.47	□□□□□ -2.33
YOP1	YPR028W	MRPL24	P36525	258 aa	Predicted RBP	0.47	□□□□□ -2.33
YOP1	YPR028W	GPI2	P46961	280 aa		0.47	□□□□□ -2.33
YOP1	YPR028W	VMA10	P48836	114 aa	Known RBP	0.47	□□□□□ -2.33
YOP1	YPR028W	SED1	Q01589	338 aa		0.47	□□□□□ -2.33
YOP1	YPR028W	TLG1	Q03322	224 aa		0.47	□□□□□ -2.33
YOP1	YPR028W	YPR153W	Q06537	140 aa		0.47	□□□□□ -2.33
YOP1	YPR028W	GPI11	Q06636	219 aa		0.47	□□□□□ -2.33
YOP1	YPR028W	SCS22	Q6Q595	175 aa		0.47	□□□□□ -2.33
YOP1	YPR028W	ROM2	P51862	1356 aa	Known RBP	0.46	□□□□□ -2.34
YOP1	YPR028W	RPL33A	P05744	107 aa	Known RBP	0.46	□□□□□ -2.34
YOP1	YPR028W	RPS22A	P0C0W1	130 aa	Known RBP	0.46	□□□□□ -2.34
YOP1	YPR028W	NHP6A	P11632	93 aa	Known RBP	0.46	□□□□□ -2.34
YOP1	YPR028W	YJL218W	P40892	196 aa	Known RBP	0.46	□□□□□ -2.34
YOP1	YPR028W	MGR2	Q02889	113 aa		0.46	□□□□□ -2.34
YOP1	YPR028W	SEN15	Q04675	128 aa		0.46	□□□□□ -2.34
YOP1	YPR028W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.46	□□□□□ -2.34
YOP1	YPR028W	RIB3	Q99258	208 aa		0.46	□□□□□ -2.34
YOP1	YPR028W	DDR48	P18899	430 aa	Known RBP	0.45	□□□□□ -2.34
YOP1	YPR028W	FIG1	P38224	298 aa		0.45	□□□□□ -2.34
YOP1	YPR028W	IRC21	Q04772	201 aa		0.45	□□□□□ -2.34
YOP1	YPR028W	RME1	P32338	300 aa	Known RBP	0.44	□□□□□ -2.34
YOP1	YPR028W	SRL3	P36167	246 aa		0.44	□□□□□ -2.34
YOP1	YPR028W	YJL009W	P47078	108 aa		0.44	□□□□□ -2.34
YOP1	YPR028W	EST3	Q03096	181 aa		0.44	□□□□□ -2.34
YOP1	YPR028W	RAV2	Q03956	351 aa		0.44	□□□□□ -2.34
YOP1	YPR028W	PRM3	Q08931	133 aa		0.44	□□□□□ -2.34
YOP1	YPR028W	MHF1	Q3E835	90 aa		0.44	□□□□□ -2.34
YOP1	YPR028W	HSP12	P22943	109 aa	Known RBP	0.43	□□□□□ -2.34
YOP1	YPR028W	DIE2	P50076	525 aa		0.43	□□□□□ -2.34
YOP1	YPR028W	PKR1	Q03880	122 aa	Known RBP	0.43	□□□□□ -2.34
YOP1	YPR028W	HUT1	Q12520	339 aa		0.43	□□□□□ -2.34
YOP1	YPR028W	PET20	Q99373	253 aa		0.43	□□□□□ -2.34
YOP1	YPR028W	HSL1	P34244	1518 aa		0.43	□□□□□ -2.34
YOP1	YPR028W	COX5B	P00425	151 aa		0.42	□□□□□ -2.34
YOP1	YPR028W	YGL014C-A	P0C5N1	53 aa		0.42	□□□□□ -2.34
YOP1	YPR028W	YMR141C	P40211	102 aa		0.42	□□□□□ -2.34
YOP1	YPR028W	YCL001W-A	P87012	153 aa		0.42	□□□□□ -2.34
YOP1	YPR028W	PET54	P10834	293 aa		0.41	□□□□□ -2.34
YOP1	YPR028W	RPS1B	P23248	255 aa	Known RBP	0.41	□□□□□ -2.34
YOP1	YPR028W	FYV5	P25585	152 aa		0.41	□□□□□ -2.34
YOP1	YPR028W	IPI1	P38803	334 aa	Predicted RBP	0.41	□□□□□ -2.34
YOP1	YPR028W	YHR140W	P38842	239 aa		0.41	□□□□□ -2.34
YOP1	YPR028W	YNL019C	P53975	284 aa		0.41	□□□□□ -2.34
YOP1	YPR028W	YMR122C	Q03879	124 aa		0.41	□□□□□ -2.34
YOP1	YPR028W	KTI11	Q3E840	82 aa		0.41	□□□□□ -2.34
YOP1	YPR028W	YGR201C	P42936	225 aa		0.4	□□□□□ -2.35
YOP1	YPR028W	LSM8	P47093	109 aa	Known RBP	0.4	□□□□□ -2.35
YOP1	YPR028W	MOG1	P47123	218 aa		0.4	□□□□□ -2.35
YOP1	YPR028W	YDR366C	P87287	132 aa		0.4	□□□□□ -2.35
YOP1	YPR028W	SOM1	Q05676	74 aa		0.4	□□□□□ -2.35
YOP1	YPR028W	RAF1	Q06891	181 aa		0.4	□□□□□ -2.35
YOP1	YPR028W	NAT5	Q08689	176 aa		0.4	□□□□□ -2.35
YOP1	YPR028W	COA6	Q3E846	104 aa		0.4	□□□□□ -2.35
YOP1	YPR028W	RPL43A	P0CX25	92 aa	Known RBP	0.39	□□□□□ -2.35
YOP1	YPR028W	RPL43B	P0CX26	92 aa		0.39	□□□□□ -2.35
YOP1	YPR028W	FUN14	P18411	198 aa		0.39	□□□□□ -2.35
YOP1	YPR028W	ANB1	P19211	157 aa		0.39	□□□□□ -2.35
YOP1	YPR028W	SUI1	P32911	108 aa	Known RBP	0.39	□□□□□ -2.35
YOP1	YPR028W	ARC19	P33204	171 aa	Known RBP	0.39	□□□□□ -2.35
YOP1	YPR028W	PHB1	P40961	287 aa		0.39	□□□□□ -2.35
YOP1	YPR028W	LST8	P41318	303 aa		0.39	□□□□□ -2.35
YOP1	YPR028W	MVB12	P42939	101 aa		0.39	□□□□□ -2.35
YOP1	YPR028W	LSM1	P47017	172 aa	Known RBP	0.39	□□□□□ -2.35
YOP1	YPR028W	SMD2	Q06217	110 aa	Known RBP	0.39	□□□□□ -2.35
YOP1	YPR028W	DDP1	Q99321	188 aa	Known RBP	0.39	□□□□□ -2.35
YOP1	YPR028W	YHR213W	P0CI67	198 aa		0.38	□□□□□ -2.35
YOP1	YPR028W	NMT1	P14743	455 aa		0.38	□□□□□ -2.35
YOP1	YPR028W	SPG1	P50088	95 aa		0.38	□□□□□ -2.35
YOP1	YPR028W	COA4	Q05809	96 aa		0.38	□□□□□ -2.35
YOP1	YPR028W	YLR307C-A	Q3E825	87 aa		0.38	□□□□□ -2.35
YOP1	YPR028W	PRP8	P33334	2413 aa	Known RBP	0.38	□□□□□ -2.35
YOP1	YPR028W	YOR1	P53049	1477 aa		0.37	□□□□□ -2.35
YOP1	YPR028W	RIF1	P29539	1916 aa		0.37	□□□□□ -2.35
YOP1	YPR028W	MRPL44	P19956	98 aa		0.37	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 54.1 ms